RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 MTURNQ8N3F0 131 aa13.2□□□□□ -0.3
XRCC3-218ENST00000557439 PRADC1Q9BSG0 188 aa13.2□□□□□ -0.3
XRCC3-218ENST00000557439 K7ERU9 68 aa13.2□□□□□ -0.3
XRCC3-218ENST00000557439 ABCA12Q86UK0 2595 aa13.2□□□□□ -0.3
XRCC3-218ENST00000557439 PLEKHB2Q96CS7 222 aa13.19□□□□□ -0.3
XRCC3-218ENST00000557439 PTPN13Q12923 2485 aa13.19□□□□□ -0.3
XRCC3-218ENST00000557439 MYMXA0A1B0GTQ4 84 aa13.19□□□□□ -0.3
XRCC3-218ENST00000557439 ID1P41134 155 aa13.19□□□□□ -0.3
XRCC3-218ENST00000557439 C12orf74Q32Q52 190 aa13.19□□□□□ -0.3
XRCC3-218ENST00000557439 AMTNQ6UX39 209 aa13.19□□□□□ -0.3
XRCC3-218ENST00000557439 ZNF256Q9Y2P7 627 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-218ENST00000557439 LGALS1P09382 135 aaKnown RBP13.18□□□□□ -0.3
XRCC3-218ENST00000557439 MED14OSP0DP75 135 aa13.18□□□□□ -0.3
XRCC3-218ENST00000557439 IGLL5B9A064 214 aa13.18□□□□□ -0.3
XRCC3-218ENST00000557439 NXPH4O95158 308 aa13.18□□□□□ -0.3
XRCC3-218ENST00000557439 SLC25A16P16260 332 aa13.18□□□□□ -0.3
XRCC3-218ENST00000557439 ZFP2Q6ZN57 461 aa13.18□□□□□ -0.3
XRCC3-218ENST00000557439 TRBV7-3A0A075B6L6 115 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 C11orf86A6NJI1 115 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 TGFAP01135 160 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 PRB1P04280 392 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 Q8N1Y9 231 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 OPRPNQ99935 248 aaPredicted RBP13.17□□□□□ -0.3
XRCC3-218ENST00000557439 TEX15Q9BXT5 2789 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 ZNF462Q96JM2 2506 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 TLN2Q9Y4G6 2542 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 SDHAF1A6NFY7 115 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 K7EMT4 169 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 PRM2P04554 102 aa13.17□□□□□ -0.3
XRCC3-218ENST00000557439 HTN1P15515 57 aa13.16□□□□□ -0.3
XRCC3-218ENST00000557439 IGHV4OR15-8A0A075B7B6 117 aa13.16□□□□□ -0.3
XRCC3-218ENST00000557439 A0A087WW49 117 aa13.16□□□□□ -0.3
XRCC3-218ENST00000557439 POLR2KP53803 58 aaKnown RBP13.16□□□□□ -0.3
XRCC3-218ENST00000557439 OR5A1Q8NGJ0 315 aa13.16□□□□□ -0.3
XRCC3-218ENST00000557439 IGHV3-16A0A0C4DH30 117 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 A0A0J9YX75 114 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 ZNF815PA8K554 130 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 RPL24P83731 157 aaKnown RBP13.15□□□□□ -0.3
XRCC3-218ENST00000557439 ZNF56Q15929 161 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 SFTA2Q6UW10 78 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 C18orf65Q6ZTR6 163 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 ZNF479Q96JC4 524 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 IGLV4-69A0A075B6H9 119 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 A6NJY4 79 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 SCGB2A2Q13296 93 aa13.15□□□□□ -0.3
XRCC3-218ENST00000557439 MORN3Q6PF18 240 aaPredicted RBP13.15□□□□□ -0.3
XRCC3-218ENST00000557439 ZNF469Q96JG9 3925 aaPredicted RBP13.14□□□□□ -0.31
XRCC3-218ENST00000557439 MYO9AB2RTY4 2548 aa13.14□□□□□ -0.31
XRCC3-218ENST00000557439 TRBV7-9A0A0J9YWB2 115 aa13.14□□□□□ -0.31
XRCC3-218ENST00000557439 POM121L12Q8N7R1 296 aa13.14□□□□□ -0.31
XRCC3-218ENST00000557439 IGIPA6NJ69 53 aa13.14□□□□□ -0.31
XRCC3-218ENST00000557439 E9PLD3 99 aa13.14□□□□□ -0.31
XRCC3-218ENST00000557439 H3BMG7 143 aa13.14□□□□□ -0.31
XRCC3-218ENST00000557439 CFAP161Q6P656 301 aa13.14□□□□□ -0.31
XRCC3-218ENST00000557439 SCGB1D4Q6XE38 83 aa13.13□□□□□ -0.31
XRCC3-218ENST00000557439 BEX4Q9NWD9 120 aaPredicted RBP13.13□□□□□ -0.31
XRCC3-218ENST00000557439 TEX48A0A1B0GUV7 120 aa13.13□□□□□ -0.31
XRCC3-218ENST00000557439 G3V4G9 280 aa13.12□□□□□ -0.31
XRCC3-218ENST00000557439 K7EQG2 157 aa13.12□□□□□ -0.31
XRCC3-218ENST00000557439 WFDC2Q14508 124 aa13.12□□□□□ -0.31
XRCC3-218ENST00000557439 IGHV3-73A0A0B4J1V6 119 aa13.12□□□□□ -0.31
XRCC3-218ENST00000557439 TSPEAR-AS2P59090 65 aa13.12□□□□□ -0.31
XRCC3-218ENST00000557439 DUX3Q96PT4 197 aa13.12□□□□□ -0.31
XRCC3-218ENST00000557439 KIR2DL4Q99706 377 aa13.12□□□□□ -0.31
XRCC3-218ENST00000557439 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
XRCC3-218ENST00000557439 LINC01356Q8N9X3 169 aa13.11□□□□□ -0.31
XRCC3-218ENST00000557439 C9orf85Q96MD7 179 aa13.11□□□□□ -0.31
XRCC3-218ENST00000557439 KNCNA6PVL3 124 aa13.11□□□□□ -0.31
XRCC3-218ENST00000557439 COX6B1P14854 86 aa13.11□□□□□ -0.31
XRCC3-218ENST00000557439 HOXD3P31249 432 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-218ENST00000557439 COTL1Q14019 142 aa13.11□□□□□ -0.31
XRCC3-218ENST00000557439 ZNRF2Q8NHG8 242 aa13.11□□□□□ -0.31
XRCC3-218ENST00000557439 VCYO14598 125 aa13.1□□□□□ -0.31
XRCC3-218ENST00000557439 PPP1R17O96001 155 aa13.1□□□□□ -0.31
XRCC3-218ENST00000557439 RBMY1A1P0DJD3 496 aaKnown RBP13.1□□□□□ -0.31
XRCC3-218ENST00000557439 RBMY1CP0DJD4 496 aa13.1□□□□□ -0.31
XRCC3-218ENST00000557439 RBMY1FQ15415 496 aaKnown RBP13.1□□□□□ -0.31
XRCC3-218ENST00000557439 TAL2Q16559 108 aa13.1□□□□□ -0.31
XRCC3-218ENST00000557439 TMEM170BQ5T4T1 132 aa13.1□□□□□ -0.31
XRCC3-218ENST00000557439 A0A096LNT2 108 aa13.1□□□□□ -0.31
XRCC3-218ENST00000557439 IGHV1OR15-1A0A075B7D0 117 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 M0QY20 66 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 P0DMU3 169 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 FOXI2Q6ZQN5 318 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 SONP18583 2426 aaKnown RBP13.09□□□□□ -0.31
XRCC3-218ENST00000557439 SLURP1P55000 103 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 PROK1P58294 105 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 SRSF9Q13242 221 aaKnown RBP eCLIP13.09□□□□□ -0.31
XRCC3-218ENST00000557439 PMVKQ15126 192 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 ZNF876PQ49A33 203 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 SH2D6Q7Z4S9 175 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 NAV2Q8IVL1 2488 aa13.09□□□□□ -0.31
XRCC3-218ENST00000557439 IGHV3-64A0A075B6Q5 118 aa13.08□□□□□ -0.32
XRCC3-218ENST00000557439 LGALS9O00182 355 aa13.08□□□□□ -0.32
XRCC3-218ENST00000557439 RRN3P1Q2M238 152 aa13.08□□□□□ -0.32
XRCC3-218ENST00000557439 KRTAP10-9P60411 292 aa13.08□□□□□ -0.32
XRCC3-218ENST00000557439 ZNF580Q9UK33 172 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 530.4 ms