RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 WFDC2Q14508 124 aa10.52□□□□□ -0.73
TUBB3-213ENST00000557262 FAM162BQ5T6X4 162 aa10.52□□□□□ -0.73
TUBB3-213ENST00000557262 SFRP2Q96HF1 295 aa10.52□□□□□ -0.73
TUBB3-213ENST00000557262 FMC1Q96HJ9 113 aa10.52□□□□□ -0.73
TUBB3-213ENST00000557262 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.73
TUBB3-213ENST00000557262 COX11Q9Y6N1 276 aa10.52□□□□□ -0.73
TUBB3-213ENST00000557262 DNAH8Q96JB1 4490 aa10.51□□□□□ -0.73
TUBB3-213ENST00000557262 FAM74A4Q5TZK3 123 aa10.51□□□□□ -0.73
TUBB3-213ENST00000557262 URGCP-MRPS24S4R325 110 aa10.51□□□□□ -0.73
TUBB3-213ENST00000557262 TRBV6-1A0A0K0K1D8 114 aa10.5□□□□□ -0.73
TUBB3-213ENST00000557262 MAP1LC3B2A6NCE7 125 aa10.5□□□□□ -0.73
TUBB3-213ENST00000557262 SEC11BP0C7V7 166 aa10.5□□□□□ -0.73
TUBB3-213ENST00000557262 TPT1P13693 172 aaKnown RBP10.5□□□□□ -0.73
TUBB3-213ENST00000557262 FHITP49789 147 aa10.5□□□□□ -0.73
TUBB3-213ENST00000557262 ZNF674Q2M3X9 581 aa10.5□□□□□ -0.73
TUBB3-213ENST00000557262 NIT1Q86X76 327 aa10.5□□□□□ -0.73
TUBB3-213ENST00000557262 RMI2Q96E14 147 aa10.5□□□□□ -0.73
TUBB3-213ENST00000557262 MAP1LC3BQ9GZQ8 125 aa10.5□□□□□ -0.73
TUBB3-213ENST00000557262 CYTL1Q9NRR1 136 aa10.5□□□□□ -0.73
TUBB3-213ENST00000557262 A0A087WWL8 130 aa10.49□□□□□ -0.73
TUBB3-213ENST00000557262 LECT2O14960 151 aa10.49□□□□□ -0.73
TUBB3-213ENST00000557262 LINC01559Q495D7 138 aa10.49□□□□□ -0.73
TUBB3-213ENST00000557262 CST9LP1Q5W188 147 aa10.49□□□□□ -0.73
TUBB3-213ENST00000557262 STOML3Q8TAV4 291 aa10.49□□□□□ -0.73
TUBB3-213ENST00000557262 BAALCQ8WXS3 180 aa10.49□□□□□ -0.73
TUBB3-213ENST00000557262 TCEAL7Q9BRU2 100 aa10.49□□□□□ -0.73
TUBB3-213ENST00000557262 TMSB15BA0A087X1C1 80 aa10.48□□□□□ -0.73
TUBB3-213ENST00000557262 G3V3Q6 166 aa10.48□□□□□ -0.73
TUBB3-213ENST00000557262 M0R381 172 aa10.48□□□□□ -0.73
TUBB3-213ENST00000557262 LTAP01374 205 aa10.48□□□□□ -0.73
TUBB3-213ENST00000557262 Q6ZSA8 131 aa10.48□□□□□ -0.73
TUBB3-213ENST00000557262 ZFP82Q8N141 532 aa10.48□□□□□ -0.73
TUBB3-213ENST00000557262 Q8N976 141 aa10.48□□□□□ -0.73
TUBB3-213ENST00000557262 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.47□□□□□ -0.73
TUBB3-213ENST00000557262 TRBV10-1A0A0K0K1A3 114 aa10.47□□□□□ -0.73
TUBB3-213ENST00000557262 ARPC5O15511 151 aa10.47□□□□□ -0.73
TUBB3-213ENST00000557262 KLK12Q9UKR0 248 aa10.47□□□□□ -0.73
TUBB3-213ENST00000557262 PLA2G1BP04054 148 aaKnown RBP10.46□□□□□ -0.73
TUBB3-213ENST00000557262 AKR1C3P42330 323 aa10.46□□□□□ -0.73
TUBB3-213ENST00000557262 RPL36AP83881 106 aaKnown RBP10.46□□□□□ -0.73
TUBB3-213ENST00000557262 ELOBQ15370 118 aa10.46□□□□□ -0.73
TUBB3-213ENST00000557262 RPL36ALQ969Q0 106 aaKnown RBP10.46□□□□□ -0.73
TUBB3-213ENST00000557262 CHCHD7Q9BUK0 85 aa10.46□□□□□ -0.73
TUBB3-213ENST00000557262 TRBV7-3A0A075B6L6 115 aa10.45□□□□□ -0.74
TUBB3-213ENST00000557262 IGKV2D-24A0A075B6R9 120 aa10.45□□□□□ -0.74
TUBB3-213ENST00000557262 A0A087WX48 190 aa10.45□□□□□ -0.74
TUBB3-213ENST00000557262 PAGE4O60829 102 aa10.45□□□□□ -0.74
TUBB3-213ENST00000557262 S100A9P06702 114 aaKnown RBP10.45□□□□□ -0.74
TUBB3-213ENST00000557262 UBE2D3P61077 147 aa10.45□□□□□ -0.74
TUBB3-213ENST00000557262 UBE2D2P62837 147 aa10.45□□□□□ -0.74
TUBB3-213ENST00000557262 KCNIP4Q6PIL6 250 aa10.45□□□□□ -0.74
TUBB3-213ENST00000557262 DNAJC30Q96LL9 226 aa10.45□□□□□ -0.74
TUBB3-213ENST00000557262 RBFOX3A6NFN3 312 aa10.44□□□□□ -0.74
TUBB3-213ENST00000557262 UBE2WQ96B02 151 aa10.44□□□□□ -0.74
TUBB3-213ENST00000557262 RAB4BP61018 213 aa10.43□□□□□ -0.74
TUBB3-213ENST00000557262 Q0VG73 95 aa10.43□□□□□ -0.74
TUBB3-213ENST00000557262 OR10G8Q8NGN5 311 aa10.43□□□□□ -0.74
TUBB3-213ENST00000557262 SFT2D1Q8WV19 159 aa10.43□□□□□ -0.74
TUBB3-213ENST00000557262 MBD3L1Q8WWY6 194 aa10.43□□□□□ -0.74
TUBB3-213ENST00000557262 TMEM262E9PQX1 116 aa10.42□□□□□ -0.74
TUBB3-213ENST00000557262 LINC01620Q4KN68 170 aa10.42□□□□□ -0.74
TUBB3-213ENST00000557262 ATRAIDQ6UW56 229 aa10.42□□□□□ -0.74
TUBB3-213ENST00000557262 LINC00528Q8N1L1 170 aa10.42□□□□□ -0.74
TUBB3-213ENST00000557262 TRBV6-8A0A0A6YYG3 113 aa10.41□□□□□ -0.74
TUBB3-213ENST00000557262 UMAD1C9J7I0 102 aa10.41□□□□□ -0.74
TUBB3-213ENST00000557262 J3QL48 77 aa10.41□□□□□ -0.74
TUBB3-213ENST00000557262 CXCL1P09341 107 aa10.41□□□□□ -0.74
TUBB3-213ENST00000557262 RGS21Q2M5E4 152 aa10.41□□□□□ -0.74
TUBB3-213ENST00000557262 BAGE2Q86Y30 109 aa10.41□□□□□ -0.74
TUBB3-213ENST00000557262 KCNRGQ8N5I3 272 aa10.41□□□□□ -0.74
TUBB3-213ENST00000557262 MLST8Q9BVC4 326 aa10.41□□□□□ -0.74
TUBB3-213ENST00000557262 ZNF471Q9BX82 626 aaPredicted RBP10.41□□□□□ -0.74
TUBB3-213ENST00000557262 SMLR1H3BR10 107 aa10.4□□□□□ -0.74
TUBB3-213ENST00000557262 RPL19P84098 196 aaKnown RBP10.4□□□□□ -0.74
TUBB3-213ENST00000557262 ZNF345Q14585 488 aa10.4□□□□□ -0.74
TUBB3-213ENST00000557262 PRR27Q6MZM9 219 aa10.4□□□□□ -0.74
TUBB3-213ENST00000557262 NEXN-AS1Q8NBZ9 246 aa10.4□□□□□ -0.74
TUBB3-213ENST00000557262 OR10AG1Q8NH19 301 aa10.4□□□□□ -0.74
TUBB3-213ENST00000557262 FAM213BQ8TBF2 198 aa10.4□□□□□ -0.74
TUBB3-213ENST00000557262 SSBP4Q9BWG4 385 aaPredicted RBP10.4□□□□□ -0.74
TUBB3-213ENST00000557262 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
TUBB3-213ENST00000557262 SNAI2O43623 268 aa10.39□□□□□ -0.75
TUBB3-213ENST00000557262 PFDN1O60925 122 aa10.39□□□□□ -0.75
TUBB3-213ENST00000557262 ZNF56Q15929 161 aa10.39□□□□□ -0.75
TUBB3-213ENST00000557262 ENHOQ6UWT2 76 aa10.39□□□□□ -0.75
TUBB3-213ENST00000557262 TMUB2Q71RG4 321 aa10.39□□□□□ -0.75
TUBB3-213ENST00000557262 SCXQ7RTU7 201 aa10.39□□□□□ -0.75
TUBB3-213ENST00000557262 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.39□□□□□ -0.75
TUBB3-213ENST00000557262 DEFB104AQ8WTQ1 72 aa10.39□□□□□ -0.75
TUBB3-213ENST00000557262 A0A1B0GV50 99 aa10.38□□□□□ -0.75
TUBB3-213ENST00000557262 OR5AL1P0C617 328 aa10.38□□□□□ -0.75
TUBB3-213ENST00000557262 SPANXN1Q5VSR9 72 aa10.38□□□□□ -0.75
TUBB3-213ENST00000557262 CHAC1Q9BUX1 264 aa10.38□□□□□ -0.75
TUBB3-213ENST00000557262 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
TUBB3-213ENST00000557262 A0A0D9SG52 128 aa10.37□□□□□ -0.75
TUBB3-213ENST00000557262 HMSDA8MTL9 139 aa10.37□□□□□ -0.75
TUBB3-213ENST00000557262 F5H697 171 aa10.37□□□□□ -0.75
TUBB3-213ENST00000557262 H2AFB1P0C5Y9 115 aa10.37□□□□□ -0.75
TUBB3-213ENST00000557262 C14orf177Q52M58 125 aa10.37□□□□□ -0.75
TUBB3-213ENST00000557262 C15orf54Q8N8G6 183 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms