RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 MUC4Q99102 2169 aa6.72□□□□□ -1.33
HNRNPC-228ENST00000557033 TRAV8-1A0A0A6YYK1 113 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 TRAV4A0A0B4J268 109 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 A0A1W2PRE2 83 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 TAAR5O14804 337 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 SIVA1O15304 175 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 ORM1P02763 201 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 GNG5P63218 68 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 RGS21Q2M5E4 152 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 SAPCD1Q5SSQ6 148 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 RPL7L1Q6DKI1 246 aaKnown RBP6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 OR2T35Q8NGX2 323 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 ZNF479Q96JC4 524 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 SH3BGRL3Q9H299 93 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 EPDR1Q9UM22 224 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 PSG8Q9UQ74 426 aa6.71□□□□□ -1.34
HNRNPC-228ENST00000557033 FXYD6-FXYD2A0A087WZ82 144 aa6.7□□□□□ -1.34
HNRNPC-228ENST00000557033 F6UZH7 168 aa6.7□□□□□ -1.34
HNRNPC-228ENST00000557033 K7EP13 123 aa6.7□□□□□ -1.34
HNRNPC-228ENST00000557033 TYMSP04818 313 aa6.7□□□□□ -1.34
HNRNPC-228ENST00000557033 TMEM75Q8N9X5 138 aa6.7□□□□□ -1.34
HNRNPC-228ENST00000557033 OR4C5Q8NGB2 326 aa6.7□□□□□ -1.34
HNRNPC-228ENST00000557033 PCNPQ8WW12 178 aaKnown RBP6.7□□□□□ -1.34
HNRNPC-228ENST00000557033 NKX6-2Q9C056 277 aaPredicted RBP6.7□□□□□ -1.34
HNRNPC-228ENST00000557033 RYR1P21817 5038 aa6.7□□□□□ -1.34
HNRNPC-228ENST00000557033 TRAV9-2A0A087WT02 112 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 CTXND1A0A1B0GTU2 59 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 GGTLC3B5MD39 225 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 C9JCJ5 164 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 K7EQD1 137 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 NXPH4O95158 308 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 IGLV2-11P01706 119 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 SLPIP03973 132 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 PFN1P07737 140 aaKnown RBP6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 SFTA3P0C7M3 94 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 SRIP30626 198 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 FLI1Q01543 452 aaPredicted RBP6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 ZFP69Q49AA0 526 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 SMUG1Q53HV7 270 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 RNASEKQ6P5S7 137 aaKnown RBP6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 SH2D6Q7Z4S9 175 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 CYB561D1Q8N8Q1 229 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 PTH2Q96A98 100 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 TXNDC17Q9BRA2 123 aa6.69□□□□□ -1.34
HNRNPC-228ENST00000557033 GCGP01275 180 aa6.68□□□□□ -1.34
HNRNPC-228ENST00000557033 ZNF80P51504 273 aaPredicted RBP6.68□□□□□ -1.34
HNRNPC-228ENST00000557033 ZNF876PQ49A33 203 aa6.68□□□□□ -1.34
HNRNPC-228ENST00000557033 AKR1C8PQ5T2L2 129 aa6.68□□□□□ -1.34
HNRNPC-228ENST00000557033 PRNTQ86SH4 94 aa6.68□□□□□ -1.34
HNRNPC-228ENST00000557033 KRTAP17-1Q9BYP8 105 aa6.68□□□□□ -1.34
HNRNPC-228ENST00000557033 SMIM1B2RUZ4 78 aa6.67□□□□□ -1.34
HNRNPC-228ENST00000557033 G3V3Q6 166 aa6.67□□□□□ -1.34
HNRNPC-228ENST00000557033 LINC00315P59091 139 aa6.67□□□□□ -1.34
HNRNPC-228ENST00000557033 ZNF726P1Q15940 193 aa6.67□□□□□ -1.34
HNRNPC-228ENST00000557033 HIST1H2BAQ96A08 127 aa6.67□□□□□ -1.34
HNRNPC-228ENST00000557033 LY96Q9Y6Y9 160 aa6.67□□□□□ -1.34
HNRNPC-228ENST00000557033 FABP5P3A8MUU1 101 aa6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 ARPC5O15511 151 aa6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 RS1O15537 224 aa6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 IFNA7P01567 189 aa6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 GATA1P15976 413 aaPredicted RBP6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 UQCC3Q6UW78 93 aa6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 SPATA12Q7Z6I5 190 aa6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 PRAC1Q96KF2 57 aa6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 LINC00479Q96M42 142 aa6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 C9orf85Q96MD7 179 aa6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 CYTL1Q9NRR1 136 aa6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 CSDC2Q9Y534 153 aaKnown RBP6.66□□□□□ -1.34
HNRNPC-228ENST00000557033 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 PEX7O00628 323 aa6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 DNAH10OSP0CZ25 163 aa6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 EVI2AP22794 236 aa6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 UBE2G2P60604 165 aa6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 CFAP126Q5VTH2 177 aa6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 STOML3Q8TAV4 291 aa6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 TCEAL7Q9BRU2 100 aa6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 PRADC1Q9BSG0 188 aa6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 GEMIN7Q9H840 131 aaKnown RBP6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 ZFP30Q9Y2G7 519 aa6.65□□□□□ -1.34
HNRNPC-228ENST00000557033 IGKV3D-20A0A0C4DH25 116 aa6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 HMSDA8MTL9 139 aa6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 S100A9P06702 114 aaKnown RBP6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 MGST1P10620 155 aaKnown RBP6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 RNASE3P12724 160 aaKnown RBP6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 FGF8P55075 233 aaPredicted RBP6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 ZNF345Q14585 488 aa6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 RHOHQ15669 191 aa6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 KCNRGQ8N5I3 272 aa6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 SLC25A29Q8N8R3 303 aa6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 ARL2-SNX15V9GYD0 113 aa6.64□□□□□ -1.35
HNRNPC-228ENST00000557033 TRBV6-1A0A0K0K1D8 114 aa6.63□□□□□ -1.35
HNRNPC-228ENST00000557033 LOC100131303A0A0U1RQF7 123 aa6.63□□□□□ -1.35
HNRNPC-228ENST00000557033 MAP1LC3B2A6NCE7 125 aa6.63□□□□□ -1.35
HNRNPC-228ENST00000557033 A8MWV9 139 aa6.63□□□□□ -1.35
HNRNPC-228ENST00000557033 UMAD1C9J7I0 102 aa6.63□□□□□ -1.35
HNRNPC-228ENST00000557033 SEC11BP0C7V7 166 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms