RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 A0A0J9YX75 114 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 FAM240AA0A1B0GVK7 77 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 A4D1N5 150 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 SDHAF1A6NFY7 115 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 IGIPA6NJ69 53 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 B9A039 149 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 H3BT86 120 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 LGALS9O00182 355 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 CDX4O14627 284 aaPredicted RBP2.15□□□□□ -2.07
SLIRP-208ENST00000556956 BUB3O43684 328 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 DUSP14O95147 198 aaKnown RBP2.15□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV1-69P01742 117 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV3-23P01764 117 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV4-39P01824 125 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 ATP5G1P05496 136 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 CRYGDP07320 174 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 LY6DQ14210 128 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 EBI3Q14213 229 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 RHOHQ15669 191 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 KLK9Q2XQG4 91 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 DEFB109BQ30KR1 87 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 DEFB121Q5J5C9 76 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 MINOS1Q5TGZ0 78 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 FAM159AQ6UWV7 190 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 C2orf82Q6UX34 121 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 C9orf139Q6ZV77 190 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 GPHB5Q86YW7 130 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 MUSTN1Q8IVN3 82 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 SMIM20Q8N5G0 67 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 C14orf178Q8N769 122 aaPredicted RBP2.15□□□□□ -2.07
SLIRP-208ENST00000556956 LY6G5BQ8NDX9 201 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 EEF1AKMT3Q96AZ1 226 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 TMEM101Q96IK0 257 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 IMUPQ9GZP8 106 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 KLK9Q9UKQ9 250 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 FAM215AQ9Y5M1 114 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 MINOS1-NBL1R4GNA1 71 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 ARHGAP21Q5T5U3 1957 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 XIRP2A4UGR9 3374 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 EYSQ5T1H1 3165 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 RP1P56715 2156 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 DOCK11Q5JSL3 2073 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 GTF3C1Q12789 2109 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 MYO7BQ6PIF6 2116 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 IGLV5-37A0A075B6J1 123 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV4OR15-8A0A075B7B6 117 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 A0A087WW49 117 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 TRBV6-5A0A0K0K1A5 114 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 TRBV7-7A0A0K0K1E9 115 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 A0A1B0GUV1 79 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 TMEM223A0PJW6 202 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 E7EQL1 145 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 CRLF1O75462 422 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 TGFAP01135 160 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 POLR2KP53803 58 aaKnown RBP2.14□□□□□ -2.07
SLIRP-208ENST00000556956 BSPH1Q075Z2 132 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 ZNF56Q15929 161 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 LPAL2Q16609 132 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 ZNF876PQ49A33 203 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 IGFL3Q6UXB1 125 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 C1orf122Q6ZSJ8 110 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 TRPT1Q86TN4 253 aaKnown RBP2.14□□□□□ -2.07
SLIRP-208ENST00000556956 RNF182Q8N6D2 247 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 RPL39LQ96EH5 51 aaKnown RBP2.14□□□□□ -2.07
SLIRP-208ENST00000556956 ODF3Q96PU9 254 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 TP53TG1Q9Y2A0 90 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 ZNF256Q9Y2P7 627 aaPredicted RBP2.14□□□□□ -2.07
SLIRP-208ENST00000556956 PRUNE2Q8WUY3 3088 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 UNC13CQ8NB66 2214 aa2.14□□□□□ -2.07
SLIRP-208ENST00000556956 TECTAO75443 2155 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 NCKAP5O14513 1909 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 PTPRBP23467 1997 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 IGLV5-52A0A0A0MRZ9 124 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV7-81A0A0B4J1V7 117 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV3-66A0A0C4DH42 116 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 A0A0J9YXY3 114 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 TRBV27A0A0K0K1C4 114 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 CLPSL1A2RUU4 121 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 FAM223BA6NKX1 122 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 ODF3BA8MYP8 253 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 H7C2G1 150 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 H7C423 109 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 TIMM17BO60830 172 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 NXPH4O95158 308 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 TSHBP01222 138 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 RNASE4P34096 147 aaKnown RBP2.13□□□□□ -2.07
SLIRP-208ENST00000556956 ID1P41134 155 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 CRIP2P52943 208 aaPredicted RBP2.13□□□□□ -2.07
SLIRP-208ENST00000556956 EMP1P54849 157 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 C15orf32Q32M92 178 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 CLEC19AQ6UXS0 136 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 LINC00643Q86TS7 51 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 APRG1Q8IVJ8 170 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 FAM223AQ8IWN6 122 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 LRRC75A-AS1Q8N1F1 130 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 C3orf22Q8N5N4 141 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 Q8N6K4 173 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 ZFAND2AQ8N6M9 145 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 Q8N9W7 124 aa2.13□□□□□ -2.07
SLIRP-208ENST00000556956 ITLN2Q8WWU7 325 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms