RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 Q6ZRN7 208 aaPredicted RBP3.12□□□□□ -1.91
HIF1A-209ENST00000556827 MRPL32Q9BYC8 188 aaKnown RBP3.12□□□□□ -1.91
HIF1A-209ENST00000556827 UQCC1Q9NVA1 299 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 MRPL16Q9NX20 251 aaKnown RBP3.12□□□□□ -1.91
HIF1A-209ENST00000556827 KLF12Q9Y4X4 402 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 FRAS1Q86XX4 4008 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 TRBV19A0A075B6N1 114 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 C9orf170A2RU37 121 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 FAM25EA8MYX2 175 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 H3BQ15 152 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 SLC17A3O00476 420 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 MRPS12O15235 138 aaKnown RBP3.11□□□□□ -1.91
HIF1A-209ENST00000556827 IGLC2P0DOY2 106 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 S100A11P31949 105 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 HBG1P69891 147 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 HBG2P69892 147 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 BAXQ07812 192 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 ERCC8Q13216 396 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 TDRG1Q3Y452 100 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 SPANXN2Q5MJ10 180 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 STX12Q86Y82 276 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 C11orf72Q8NBR9 251 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 OR4C5Q8NGB2 326 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 DEFB104AQ8WTQ1 72 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 BLNKQ8WV28 456 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 ATP5SQ99766 215 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 SLC25A31Q9H0C2 315 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 AGPAT4-IT1Q9H0P7 198 aa3.11□□□□□ -1.91
HIF1A-209ENST00000556827 KMT2AQ03164 3969 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 LINC00854A0A1B0GVQ3 168 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 C7orf66A4D0T2 115 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 CCDC160A6NGH7 325 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 M0R3E3 92 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 CCNKO75909 580 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 CST7O76096 145 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 C1QBP02746 253 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 PFN1P07737 140 aaKnown RBP3.1□□□□□ -1.91
HIF1A-209ENST00000556827 CRISP2P16562 243 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 ZNF138P52744 262 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 BTN1A1Q13410 526 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 ATP6V1FQ16864 119 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 OR10J3Q5JRS4 329 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 MIC13Q5XKP0 118 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 WFDC10BQ8IUB3 73 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 IQCF2Q8IXL9 164 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 MGST2Q99735 147 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 PRADC1Q9BSG0 188 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 TPPP3Q9BW30 176 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 SLIRPQ9GZT3 109 aaKnown RBP3.1□□□□□ -1.91
HIF1A-209ENST00000556827 KCNIP2Q9NS61 270 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 TMEM14CQ9P0S9 112 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 RCL1Q9Y2P8 373 aaKnown RBP3.1□□□□□ -1.91
HIF1A-209ENST00000556827 MUC4Q99102 2169 aa3.1□□□□□ -1.91
HIF1A-209ENST00000556827 IGKV2-40A0A087WW87 121 aaPredicted RBP3.09□□□□□ -1.91
HIF1A-209ENST00000556827 TRAV4A0A0B4J268 109 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 UBE2L5PA0A1B0GUS4 154 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 M0R2P5 195 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 NDUFB6O95139 128 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 IGKV2D-40P01614 121 aaPredicted RBP3.09□□□□□ -1.91
HIF1A-209ENST00000556827 NBEAP1P0C6P0 100 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 SEC11BP0C7V7 166 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 FGF7P21781 194 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 SULT1A1P50225 295 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 HNRNPA3P51991 378 aaKnown RBP3.09□□□□□ -1.91
HIF1A-209ENST00000556827 HAMPP81172 84 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 PLECQ15149 4684 aaKnown RBP3.09□□□□□ -1.91
HIF1A-209ENST00000556827 TMEM183BQ1AE95 376 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 FAM74A1Q5RGS3 127 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 TMEM183AQ8IXX5 376 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 EXOC3-AS1Q8N2X6 119 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 Q8N814 137 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 NKAPP1Q8N9T2 125 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 OR10G4Q8NGN3 311 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 RMI2Q96E14 147 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 FAM19A4Q96LR4 140 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 ZNF492Q9P255 531 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 NAGKQ9UJ70 344 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 KLK12Q9UKR0 248 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 FLVCR2Q9UPI3 526 aa3.09□□□□□ -1.91
HIF1A-209ENST00000556827 LSM5Q9Y4Y9 91 aaKnown RBP3.09□□□□□ -1.91
HIF1A-209ENST00000556827 TRAV8-3A0A0A6YYJ7 113 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 RBAKDNA6NC62 111 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 FAM24AA6NFZ4 105 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 IBA57-AS1B1ANH7 110 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 C17orf112F2Z3M2 114 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 OR7C2O60412 319 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 IGHV3-30P01768 117 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 IGHV3-33P01772 117 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 GIPP09681 153 aaPredicted RBP3.08□□□□□ -1.92
HIF1A-209ENST00000556827 SFTA3P0C7M3 94 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 IGHV3-30-3P0DP02 117 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 IGHV3-30-5P0DP03 117 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 PYYP10082 97 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 S100A10P60903 97 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 RANP62826 216 aaKnown RBP3.08□□□□□ -1.92
HIF1A-209ENST00000556827 ZNF266Q14584 549 aa3.08□□□□□ -1.92
HIF1A-209ENST00000556827 ACOT6Q3I5F7 207 aaPredicted RBP3.08□□□□□ -1.92
HIF1A-209ENST00000556827 LINC01556Q5JQF7 62 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms