RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 IGLV2-11P01706 119 aa7.83□□□□□ -1.16
ACTN1-221ENST00000556571 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
ACTN1-221ENST00000556571 TOR2AQ5JU69 321 aa7.83□□□□□ -1.16
ACTN1-221ENST00000556571 ATP6V0E2Q8NHE4 81 aa7.83□□□□□ -1.16
ACTN1-221ENST00000556571 FMC1Q96HJ9 113 aa7.83□□□□□ -1.16
ACTN1-221ENST00000556571 LINC00479Q96M42 142 aa7.83□□□□□ -1.16
ACTN1-221ENST00000556571 CHAC1Q9BUX1 264 aa7.83□□□□□ -1.16
ACTN1-221ENST00000556571 COX11Q9Y6N1 276 aa7.83□□□□□ -1.16
ACTN1-221ENST00000556571 RBFOX3A6NFN3 312 aa7.82□□□□□ -1.16
ACTN1-221ENST00000556571 RS1O15537 224 aa7.82□□□□□ -1.16
ACTN1-221ENST00000556571 TYMSP04818 313 aa7.82□□□□□ -1.16
ACTN1-221ENST00000556571 AKR1C3P42330 323 aa7.82□□□□□ -1.16
ACTN1-221ENST00000556571 ZNF876PQ49A33 203 aa7.82□□□□□ -1.16
ACTN1-221ENST00000556571 CFAP126Q5VTH2 177 aa7.82□□□□□ -1.16
ACTN1-221ENST00000556571 Q86TA4 180 aa7.82□□□□□ -1.16
ACTN1-221ENST00000556571 ZFP30Q9Y2G7 519 aa7.82□□□□□ -1.16
ACTN1-221ENST00000556571 LINC01620Q4KN68 170 aa7.81□□□□□ -1.16
ACTN1-221ENST00000556571 Q8N976 141 aa7.81□□□□□ -1.16
ACTN1-221ENST00000556571 BAALCQ8WXS3 180 aa7.81□□□□□ -1.16
ACTN1-221ENST00000556571 MANBALQ9NQG1 85 aa7.81□□□□□ -1.16
ACTN1-221ENST00000556571 GNG13Q9P2W3 67 aa7.81□□□□□ -1.16
ACTN1-221ENST00000556571 IGHV3-73A0A0B4J1V6 119 aa7.8□□□□□ -1.16
ACTN1-221ENST00000556571 FABP5P3A8MUU1 101 aa7.8□□□□□ -1.16
ACTN1-221ENST00000556571 IFNA1P01562 189 aa7.8□□□□□ -1.16
ACTN1-221ENST00000556571 S100A9P06702 114 aaKnown RBP7.8□□□□□ -1.16
ACTN1-221ENST00000556571 MGST1P10620 155 aaKnown RBP7.8□□□□□ -1.16
ACTN1-221ENST00000556571 SULT1A2P50226 295 aa7.8□□□□□ -1.16
ACTN1-221ENST00000556571 ZNF80P51504 273 aaPredicted RBP7.8□□□□□ -1.16
ACTN1-221ENST00000556571 Q8N3U1 123 aa7.8□□□□□ -1.16
ACTN1-221ENST00000556571 C9orf62Q8N4C0 152 aa7.8□□□□□ -1.16
ACTN1-221ENST00000556571 CIRBP-AS1Q8TBR5 109 aa7.8□□□□□ -1.16
ACTN1-221ENST00000556571 RMI2Q96E14 147 aa7.8□□□□□ -1.16
ACTN1-221ENST00000556571 TRAV1-1A0A0B4J248 108 aa7.79□□□□□ -1.16
ACTN1-221ENST00000556571 IGLV2-8P01709 118 aa7.79□□□□□ -1.16
ACTN1-221ENST00000556571 S100A4P26447 101 aaKnown RBP7.79□□□□□ -1.16
ACTN1-221ENST00000556571 DAZ4Q86SG3 579 aaKnown RBP7.79□□□□□ -1.16
ACTN1-221ENST00000556571 DAZ3Q9NR90 486 aaKnown RBP7.79□□□□□ -1.16
ACTN1-221ENST00000556571 TRBV6-1A0A0K0K1D8 114 aa7.78□□□□□ -1.16
ACTN1-221ENST00000556571 A0A1B0GVG6 124 aa7.78□□□□□ -1.16
ACTN1-221ENST00000556571 SCO2A0A1W2PP80 73 aa7.78□□□□□ -1.16
ACTN1-221ENST00000556571 LTAP01374 205 aa7.78□□□□□ -1.16
ACTN1-221ENST00000556571 FAM162BQ5T6X4 162 aa7.78□□□□□ -1.16
ACTN1-221ENST00000556571 PTH2Q96A98 100 aa7.78□□□□□ -1.16
ACTN1-221ENST00000556571 A0A087WWC5 75 aa7.77□□□□□ -1.17
ACTN1-221ENST00000556571 B4DEV8 164 aa7.77□□□□□ -1.17
ACTN1-221ENST00000556571 ASIPP42127 132 aa7.77□□□□□ -1.17
ACTN1-221ENST00000556571 CCL20P78556 96 aa7.77□□□□□ -1.17
ACTN1-221ENST00000556571 BAGE2Q86Y30 109 aa7.77□□□□□ -1.17
ACTN1-221ENST00000556571 ZC2HC1AQ96GY0 325 aa7.77□□□□□ -1.17
ACTN1-221ENST00000556571 C9orf85Q96MD7 179 aa7.77□□□□□ -1.17
ACTN1-221ENST00000556571 C11orf21Q9P2W6 132 aa7.77□□□□□ -1.17
ACTN1-221ENST00000556571 GAGE12JA6NER3 117 aa7.76□□□□□ -1.17
ACTN1-221ENST00000556571 PGPEP1LA6NFU8 196 aa7.76□□□□□ -1.17
ACTN1-221ENST00000556571 M0R036 132 aa7.76□□□□□ -1.17
ACTN1-221ENST00000556571 PDE6DO43924 150 aa7.76□□□□□ -1.17
ACTN1-221ENST00000556571 TAGLN2P37802 199 aaKnown RBP7.76□□□□□ -1.17
ACTN1-221ENST00000556571 GAGE1Q13065 139 aa7.76□□□□□ -1.17
ACTN1-221ENST00000556571 GAGE4Q13068 117 aa7.76□□□□□ -1.17
ACTN1-221ENST00000556571 GAGE5Q13069 117 aa7.76□□□□□ -1.17
ACTN1-221ENST00000556571 GAGE13Q4V321 117 aa7.76□□□□□ -1.17
ACTN1-221ENST00000556571 ZNF506Q5JVG8 444 aa7.76□□□□□ -1.17
ACTN1-221ENST00000556571 ALKAL2Q6UX46 152 aa7.76□□□□□ -1.17
ACTN1-221ENST00000556571 IGKV2D-24A0A075B6R9 120 aa7.75□□□□□ -1.17
ACTN1-221ENST00000556571 SH2D1AO60880 128 aa7.75□□□□□ -1.17
ACTN1-221ENST00000556571 LINC00694P0DN24 101 aa7.75□□□□□ -1.17
ACTN1-221ENST00000556571 NKX2-5P52952 324 aaPredicted RBP7.75□□□□□ -1.17
ACTN1-221ENST00000556571 BLOC1S1P78537 153 aa7.75□□□□□ -1.17
ACTN1-221ENST00000556571 MEF2BQ02080 365 aaPredicted RBP7.75□□□□□ -1.17
ACTN1-221ENST00000556571 ZFP2Q6ZN57 461 aa7.75□□□□□ -1.17
ACTN1-221ENST00000556571 COX8CQ7Z4L0 72 aa7.75□□□□□ -1.17
ACTN1-221ENST00000556571 URGCP-MRPS24S4R325 110 aa7.75□□□□□ -1.17
ACTN1-221ENST00000556571 IGKV3D-20A0A0C4DH25 116 aa7.74□□□□□ -1.17
ACTN1-221ENST00000556571 BCL2P10415 239 aa7.74□□□□□ -1.17
ACTN1-221ENST00000556571 RPL35P42766 123 aaKnown RBP7.74□□□□□ -1.17
ACTN1-221ENST00000556571 RPL37AP61513 92 aaKnown RBP7.74□□□□□ -1.17
ACTN1-221ENST00000556571 ZNF674Q2M3X9 581 aa7.74□□□□□ -1.17
ACTN1-221ENST00000556571 VAX2Q9UIW0 290 aa7.74□□□□□ -1.17
ACTN1-221ENST00000556571 TMSB15BA0A087X1C1 80 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 A8MWV9 139 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 KRBOX1C9JBD0 128 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 RNASE3P12724 160 aaKnown RBP7.73□□□□□ -1.17
ACTN1-221ENST00000556571 GNG4P50150 75 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 CRIP1P50238 77 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 C14orf177Q52M58 125 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 PIK3CD-AS1Q5SR53 167 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 PRR27Q6MZM9 219 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 NIT1Q86X76 327 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 C11orf52Q96A22 123 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 PARLQ9H300 379 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 MED9Q9NWA0 146 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 IL36BQ9NZH7 164 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 KLK12Q9UKR0 248 aa7.73□□□□□ -1.17
ACTN1-221ENST00000556571 GRIFINA4D1Z8 144 aa7.72□□□□□ -1.17
ACTN1-221ENST00000556571 H3BVH4 76 aa7.72□□□□□ -1.17
ACTN1-221ENST00000556571 ELOBQ15370 118 aa7.72□□□□□ -1.17
ACTN1-221ENST00000556571 LINC01559Q495D7 138 aa7.72□□□□□ -1.17
ACTN1-221ENST00000556571 CENPWQ5EE01 88 aa7.72□□□□□ -1.17
ACTN1-221ENST00000556571 UBE2WQ96B02 151 aa7.72□□□□□ -1.17
ACTN1-221ENST00000556571 DAZAP1Q96EP5 407 aaKnown RBP7.72□□□□□ -1.17
ACTN1-221ENST00000556571 DNAJC30Q96LL9 226 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms