RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 FOXA3P55318 350 aaPredicted RBP9.86□□□□□ -0.83
VIPAS39-208ENST00000556412 CLRN3Q8NCR9 226 aa9.86□□□□□ -0.83
VIPAS39-208ENST00000556412 A0A1B0GUT8 65 aa9.86□□□□□ -0.83
VIPAS39-208ENST00000556412 RHODO00212 210 aa9.86□□□□□ -0.83
VIPAS39-208ENST00000556412 RPS10P5Q9NQ39 176 aa9.86□□□□□ -0.83
VIPAS39-208ENST00000556412 PRO0255Q9UI72 69 aa9.86□□□□□ -0.83
VIPAS39-208ENST00000556412 C7orf77A4D0Y5 90 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 PAX4O43316 350 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 NUDT3O95989 172 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 CRYGDP07320 174 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 MGPP08493 103 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 TRGC1P0CF51 173 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 EVI2AP22794 236 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 ZNF56Q15929 161 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 WDR73Q6P4I2 378 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 SVBPQ8N300 66 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 CNFNQ9BYD5 112 aa9.85□□□□□ -0.83
VIPAS39-208ENST00000556412 F5H697 171 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 CRYBA4P53673 196 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 FAM3BP58499 235 aaPredicted RBP9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 SLAQ13239 276 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 ZFP2Q6ZN57 461 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 SMIM15Q7Z3B0 74 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 CTDSP1Q9GZU7 261 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 CIDEAO60543 219 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 SNAPINO95295 136 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 GATA1P15976 413 aaPredicted RBP9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 RIGQ13278 110 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 RHEBQ15382 184 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 MRPL54Q6P161 138 aaKnown RBP9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 Q6ZSN1 163 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 VSIG2Q96IQ7 327 aa9.84□□□□□ -0.83
VIPAS39-208ENST00000556412 UFSP1Q6NVU6 142 aa9.83□□□□□ -0.84
VIPAS39-208ENST00000556412 SLC25A29Q8N8R3 303 aa9.83□□□□□ -0.84
VIPAS39-208ENST00000556412 FAM210BQ96KR6 192 aa9.83□□□□□ -0.84
VIPAS39-208ENST00000556412 CAMPP49913 170 aa9.82□□□□□ -0.84
VIPAS39-208ENST00000556412 LOC100131303A0A0U1RQF7 123 aa9.82□□□□□ -0.84
VIPAS39-208ENST00000556412 GYPEP15421 78 aa9.82□□□□□ -0.84
VIPAS39-208ENST00000556412 KCNIP4Q6PIL6 250 aa9.82□□□□□ -0.84
VIPAS39-208ENST00000556412 PRADC1Q9BSG0 188 aa9.82□□□□□ -0.84
VIPAS39-208ENST00000556412 DPH3P1Q9H4G8 78 aa9.82□□□□□ -0.84
VIPAS39-208ENST00000556412 TRBV6-4A0A1B0GX49 114 aa9.81□□□□□ -0.84
VIPAS39-208ENST00000556412 K7EQD1 137 aa9.81□□□□□ -0.84
VIPAS39-208ENST00000556412 RHOHQ15669 191 aa9.81□□□□□ -0.84
VIPAS39-208ENST00000556412 C15orf53Q8NAA6 179 aa9.81□□□□□ -0.84
VIPAS39-208ENST00000556412 APLNQ9ULZ1 77 aa9.81□□□□□ -0.84
VIPAS39-208ENST00000556412 KIF25-AS1Q9Y6Z4 181 aa9.81□□□□□ -0.84
VIPAS39-208ENST00000556412 URGCP-MRPS24S4R325 110 aa9.81□□□□□ -0.84
VIPAS39-208ENST00000556412 A0A096LPF7 62 aa9.8□□□□□ -0.84
VIPAS39-208ENST00000556412 S100PP25815 95 aa9.8□□□□□ -0.84
VIPAS39-208ENST00000556412 ICOSQ9Y6W8 199 aa9.8□□□□□ -0.84
VIPAS39-208ENST00000556412 MUC4Q99102 2169 aa9.8□□□□□ -0.84
VIPAS39-208ENST00000556412 A0A087WWC5 75 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 P0DMU3 169 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 FAM231AP0DMU4 169 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 FAM231CP0DMU5 169 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 RAB4BP61018 213 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 HBBP68871 147 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 GAGE12JA6NER3 117 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 H3BNG1 76 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 TCTAP57738 103 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 LINC00315P59091 139 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 GAGE1Q13065 139 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 GAGE4Q13068 117 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 GAGE5Q13069 117 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 GAGE13Q4V321 117 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 IMMP2LQ96T52 175 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 TMEM242Q9NWH2 141 aa9.79□□□□□ -0.84
VIPAS39-208ENST00000556412 SRIP30626 198 aa9.78□□□□□ -0.84
VIPAS39-208ENST00000556412 SUMO4Q6EEV6 95 aa9.78□□□□□ -0.84
VIPAS39-208ENST00000556412 BTF3L4Q96K17 158 aa9.78□□□□□ -0.84
VIPAS39-208ENST00000556412 Q9UF83 564 aa9.78□□□□□ -0.84
VIPAS39-208ENST00000556412 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.84
VIPAS39-208ENST00000556412 A0A1B0GW15 77 aa9.77□□□□□ -0.84
VIPAS39-208ENST00000556412 S100A8P05109 93 aa9.77□□□□□ -0.84
VIPAS39-208ENST00000556412 MRPL23Q16540 153 aaKnown RBP9.77□□□□□ -0.84
VIPAS39-208ENST00000556412 ATRAIDQ6UW56 229 aa9.77□□□□□ -0.84
VIPAS39-208ENST00000556412 AMN1Q8IY45 258 aa9.77□□□□□ -0.84
VIPAS39-208ENST00000556412 TMEM191AQ9H0A3 160 aa9.77□□□□□ -0.84
VIPAS39-208ENST00000556412 ATP5L2Q7Z4Y8 100 aa9.77□□□□□ -0.85
VIPAS39-208ENST00000556412 A0A1B0GXF2 115 aa9.76□□□□□ -0.85
VIPAS39-208ENST00000556412 H7C1H1 209 aa9.76□□□□□ -0.85
VIPAS39-208ENST00000556412 UBE2DNLQ8IWF7 75 aa9.75□□□□□ -0.85
VIPAS39-208ENST00000556412 ZNRF2Q8NHG8 242 aa9.75□□□□□ -0.85
VIPAS39-208ENST00000556412 M0QY20 66 aa9.75□□□□□ -0.85
VIPAS39-208ENST00000556412 RPL36AP83881 106 aaKnown RBP9.75□□□□□ -0.85
VIPAS39-208ENST00000556412 NEGR1Q7Z3B1 354 aa9.75□□□□□ -0.85
VIPAS39-208ENST00000556412 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
VIPAS39-208ENST00000556412 TRBV10-1A0A0K0K1A3 114 aa9.74□□□□□ -0.85
VIPAS39-208ENST00000556412 RAB4AP20338 218 aa9.74□□□□□ -0.85
VIPAS39-208ENST00000556412 RASL11AQ6T310 242 aa9.74□□□□□ -0.85
VIPAS39-208ENST00000556412 GATD1Q8NB37 220 aa9.74□□□□□ -0.85
VIPAS39-208ENST00000556412 NEXN-AS1Q8NBZ9 246 aa9.74□□□□□ -0.85
VIPAS39-208ENST00000556412 RNF185Q96GF1 192 aa9.74□□□□□ -0.85
VIPAS39-208ENST00000556412 DNAH7Q8WXX0 4024 aa9.74□□□□□ -0.85
VIPAS39-208ENST00000556412 STARD9Q9P2P6 4700 aa9.73□□□□□ -0.85
VIPAS39-208ENST00000556412 TRAV9-1A0A075B6T8 112 aa9.73□□□□□ -0.85
VIPAS39-208ENST00000556412 LY6G6CO95867 125 aa9.73□□□□□ -0.85
VIPAS39-208ENST00000556412 NCR2O95944 276 aa9.73□□□□□ -0.85
VIPAS39-208ENST00000556412 CCL18P55774 89 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms