RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 FAM222AQ5U5X8 452 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 FAM104BQ5XKR9 115 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 ZFP2Q6ZN57 461 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 TMEM136Q6ZRR5 245 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 C14orf178Q8N769 122 aaPredicted RBP6.61□□□□□ -1.35
ACTN1-218ENST00000556343 GATD1Q8NB37 220 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 RETNQ9HD89 108 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 MRPL16Q9NX20 251 aaKnown RBP6.61□□□□□ -1.35
ACTN1-218ENST00000556343 MSRB1Q9NZV6 116 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 DKK2Q9UBU2 259 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 PLAC8L1A1L4L8 177 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 H7C1H1 209 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 PPBPP02775 128 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 DEFB130BP0DP73 79 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 DEFB130AP0DP74 79 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 EVI2AP22794 236 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 SLAQ13239 276 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 FAM74A4Q5TZK3 123 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 Q6ZTI0 123 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 MRAP2Q96G30 205 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 C18orf15Q96N68 181 aa6.6□□□□□ -1.35
ACTN1-218ENST00000556343 MRPL18Q9H0U6 180 aaKnown RBP6.6□□□□□ -1.35
ACTN1-218ENST00000556343 TRGV4A0A0C4DH28 118 aa6.59□□□□□ -1.35
ACTN1-218ENST00000556343 C1orf196B1AJZ1 125 aa6.59□□□□□ -1.35
ACTN1-218ENST00000556343 DEFB4AO15263 64 aa6.59□□□□□ -1.35
ACTN1-218ENST00000556343 RAB4AP20338 218 aa6.59□□□□□ -1.35
ACTN1-218ENST00000556343 CKS2P33552 79 aa6.59□□□□□ -1.35
ACTN1-218ENST00000556343 ZNF56Q15929 161 aa6.59□□□□□ -1.35
ACTN1-218ENST00000556343 CFAP126Q5VTH2 177 aa6.59□□□□□ -1.35
ACTN1-218ENST00000556343 NBEAL2Q6ZNJ1 2754 aa6.59□□□□□ -1.35
ACTN1-218ENST00000556343 A0A087WWL8 130 aa6.58□□□□□ -1.36
ACTN1-218ENST00000556343 ATP5G1P05496 136 aa6.58□□□□□ -1.36
ACTN1-218ENST00000556343 CRYGDP07320 174 aa6.58□□□□□ -1.36
ACTN1-218ENST00000556343 AMN1Q8IY45 258 aa6.58□□□□□ -1.36
ACTN1-218ENST00000556343 ORMDL3Q8N138 153 aa6.58□□□□□ -1.36
ACTN1-218ENST00000556343 LINC00612Q8N6U2 182 aa6.58□□□□□ -1.36
ACTN1-218ENST00000556343 C11orf45Q8TAV5 145 aa6.58□□□□□ -1.36
ACTN1-218ENST00000556343 LAMTOR2Q9Y2Q5 125 aa6.58□□□□□ -1.36
ACTN1-218ENST00000556343 A0A0J9YWU9 116 aa6.57□□□□□ -1.36
ACTN1-218ENST00000556343 TRGC2P03986 189 aa6.57□□□□□ -1.36
ACTN1-218ENST00000556343 RAB5BP61020 215 aa6.57□□□□□ -1.36
ACTN1-218ENST00000556343 MRPL51Q4U2R6 128 aaKnown RBP6.57□□□□□ -1.36
ACTN1-218ENST00000556343 POM121L12Q8N7R1 296 aa6.57□□□□□ -1.36
ACTN1-218ENST00000556343 PRADC1Q9BSG0 188 aa6.57□□□□□ -1.36
ACTN1-218ENST00000556343 JPT2Q9H910 190 aa6.57□□□□□ -1.36
ACTN1-218ENST00000556343 IGHV3-73A0A0B4J1V6 119 aa6.56□□□□□ -1.36
ACTN1-218ENST00000556343 D6R8Y8 96 aa6.56□□□□□ -1.36
ACTN1-218ENST00000556343 PHOX2AO14813 284 aa6.56□□□□□ -1.36
ACTN1-218ENST00000556343 IGHV3-53P01767 116 aa6.56□□□□□ -1.36
ACTN1-218ENST00000556343 RNF185Q96GF1 192 aa6.56□□□□□ -1.36
ACTN1-218ENST00000556343 DNAJC30Q96LL9 226 aa6.56□□□□□ -1.36
ACTN1-218ENST00000556343 SAMD10Q9BYL1 202 aa6.56□□□□□ -1.36
ACTN1-218ENST00000556343 TNFRSF18Q9Y5U5 241 aa6.56□□□□□ -1.36
ACTN1-218ENST00000556343 KIF25-AS1Q9Y6Z4 181 aa6.56□□□□□ -1.36
ACTN1-218ENST00000556343 TRBV10-1A0A0K0K1A3 114 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 TRBV6-4A0A1B0GX49 114 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 KIAA1644Q3SXP7 199 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 OR10J3Q5JRS4 329 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 SUMO4Q6EEV6 95 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 UFSP1Q6NVU6 142 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 ZNF479Q96JC4 524 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 PRELID3AQ96N28 172 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 EDA2RQ9HAV5 297 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 NIT2Q9NQR4 276 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 PRO0255Q9UI72 69 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 HHLA3Q9XRX5 114 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 U3KQK5 164 aa6.55□□□□□ -1.36
ACTN1-218ENST00000556343 F5H768 121 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 GATA1P15976 413 aaPredicted RBP6.54□□□□□ -1.36
ACTN1-218ENST00000556343 SRIP30626 198 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 LINC00315P59091 139 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 FHL2Q14192 279 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 RHOHQ15669 191 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 C12orf74Q32Q52 190 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 C20orf78Q9BR46 151 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 ALKBH7Q9BT30 221 aaPredicted RBP6.54□□□□□ -1.36
ACTN1-218ENST00000556343 MAP1LC3AQ9H492 121 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 CELA1Q9UNI1 258 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 MUC4Q99102 2169 aa6.54□□□□□ -1.36
ACTN1-218ENST00000556343 TRAV10A0A0B4J240 114 aa6.53□□□□□ -1.36
ACTN1-218ENST00000556343 K7EQD1 137 aa6.53□□□□□ -1.36
ACTN1-218ENST00000556343 M0QY20 66 aa6.53□□□□□ -1.36
ACTN1-218ENST00000556343 TCAPO15273 167 aa6.53□□□□□ -1.36
ACTN1-218ENST00000556343 TNFRSF6BO95407 300 aa6.53□□□□□ -1.36
ACTN1-218ENST00000556343 HTN3P15516 51 aa6.53□□□□□ -1.36
ACTN1-218ENST00000556343 RPL36AP83881 106 aaKnown RBP6.53□□□□□ -1.36
ACTN1-218ENST00000556343 RPL36ALQ969Q0 106 aaKnown RBP6.53□□□□□ -1.36
ACTN1-218ENST00000556343 TRAV26-2A0A0B4J265 109 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 TRBV6-5A0A0K0K1A5 114 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 SMKR1H3BMG3 65 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 VCYO14598 125 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 PAX4O43316 350 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 NCR2O95944 276 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 S100A6P06703 90 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 PMCHP20382 165 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 NANOS2P60321 138 aaKnown RBP6.52□□□□□ -1.37
ACTN1-218ENST00000556343 SH2D6Q7Z4S9 175 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 BAGE3Q86Y29 109 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 SLC25A29Q8N8R3 303 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms