RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 DSCR9P59020 149 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 CFHR3Q02985 330 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 C12orf74Q32Q52 190 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 SCGB1D4Q6XE38 83 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 NEGR1Q7Z3B1 354 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 ZNF843Q8N446 348 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 PHLDA1Q8WV24 401 aaPredicted RBP5.25□□□□□ -1.57
TDP1-213ENST00000555880 TMEM141Q96I45 108 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 ODF3Q96PU9 254 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 PRADC1Q9BSG0 188 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 TP53TG1Q9Y2A0 90 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 SELENOKQ9Y6D0 94 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 AGRNO00468 2067 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 DOPEY1Q5JWR5 2465 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 MUC4Q99102 2169 aa5.25□□□□□ -1.57
TDP1-213ENST00000555880 CFAP46Q8IYW2 2715 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 TMEM89A2RUT3 159 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 ZNF815PA8K554 130 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 IGLL5B9A064 214 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 RPL24P83731 157 aaKnown RBP5.24□□□□□ -1.57
TDP1-213ENST00000555880 SUMO4Q6EEV6 95 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 DCANP1Q8TF63 244 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 MYO18BQ8IUG5 2567 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 ZFYVE26Q68DK2 2539 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 TRBV7-3A0A075B6L6 115 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 A0A087WWL8 130 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 F8W1H4 67 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 DUSP14O95147 198 aaKnown RBP5.24□□□□□ -1.57
TDP1-213ENST00000555880 LGALS1P09382 135 aaKnown RBP5.24□□□□□ -1.57
TDP1-213ENST00000555880 PSMB8P28062 276 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 PMVKQ15126 192 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 ZFP2Q6ZN57 461 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 FOXI2Q6ZQN5 318 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 KIF25-AS1Q9Y6Z4 181 aa5.24□□□□□ -1.57
TDP1-213ENST00000555880 SVEP1Q4LDE5 3571 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 SDHAF1A6NFY7 115 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 J3QR89 54 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 PAX4O43316 350 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 ZNF688P0C7X2 276 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 LINC00315P59091 139 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 SRSF9Q13242 221 aaKnown RBP eCLIP5.23□□□□□ -1.57
TDP1-213ENST00000555880 ZNF56Q15929 161 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 RRN3P1Q2M238 152 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 FAM74A4Q5TZK3 123 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 BBC3Q96PG8 261 aaPredicted RBP5.23□□□□□ -1.57
TDP1-213ENST00000555880 TIMM17AQ99595 171 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 CSPG4Q6UVK1 2322 aa5.23□□□□□ -1.57
TDP1-213ENST00000555880 ANKRD17O75179 2603 aaKnown RBP5.23□□□□□ -1.57
TDP1-213ENST00000555880 CHD6Q8TD26 2715 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 A0A0J9YX75 114 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 A0A1B0GWB2 263 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 LGALS9O00182 355 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 HOXA3O43365 443 aaPredicted RBP5.22□□□□□ -1.57
TDP1-213ENST00000555880 IGHV4-59P01825 116 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 POLR2KP53803 58 aaKnown RBP5.22□□□□□ -1.57
TDP1-213ENST00000555880 RIPPLY3P57055 190 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 CD300EQ496F6 205 aaPredicted RBP5.22□□□□□ -1.57
TDP1-213ENST00000555880 LINC01356Q8N9X3 169 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 IGHV1OR15-1A0A075B7D0 117 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 IGHV3-16A0A0C4DH30 117 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 TRBV6-5A0A0K0K1A5 114 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 TRBV27A0A0K0K1C4 114 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 IGIPA6NJ69 53 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 C11orf86A6NJI1 115 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 J3QLI3 93 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 IGKV3-20P01619 116 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 EDN2P20800 178 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 DEFB112Q30KQ8 113 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 LYRM7Q5U5X0 104 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 TRPT1Q86TN4 253 aaKnown RBP5.22□□□□□ -1.57
TDP1-213ENST00000555880 C9orf85Q96MD7 179 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 JPT2Q9H910 190 aa5.22□□□□□ -1.57
TDP1-213ENST00000555880 MRPL16Q9NX20 251 aaKnown RBP5.22□□□□□ -1.57
TDP1-213ENST00000555880 USP9XQ93008 2570 aaPredicted RBP5.22□□□□□ -1.57
TDP1-213ENST00000555880 CELSR1Q9NYQ6 3014 aa5.21□□□□□ -1.57
TDP1-213ENST00000555880 IGLV4-69A0A075B6H9 119 aa5.21□□□□□ -1.58
TDP1-213ENST00000555880 TRGV11A0A075B6L2 103 aa5.21□□□□□ -1.58
TDP1-213ENST00000555880 TEX48A0A1B0GUV7 120 aa5.21□□□□□ -1.58
TDP1-213ENST00000555880 K7EQG2 157 aa5.21□□□□□ -1.58
TDP1-213ENST00000555880 RPL39P62891 51 aaKnown RBP5.21□□□□□ -1.58
TDP1-213ENST00000555880 RHOHQ15669 191 aa5.21□□□□□ -1.58
TDP1-213ENST00000555880 GAGE13Q4V321 117 aa5.21□□□□□ -1.58
TDP1-213ENST00000555880 TMEM170BQ5T4T1 132 aa5.21□□□□□ -1.58
TDP1-213ENST00000555880 ZNF256Q9Y2P7 627 aaPredicted RBP5.21□□□□□ -1.58
TDP1-213ENST00000555880 IGSF10Q6WRI0 2623 aa5.21□□□□□ -1.58
TDP1-213ENST00000555880 TRAV12-2A0A075B6T6 113 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 H3BMG7 143 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 TSHBP01222 138 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 CRYGDP07320 174 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 EMP1P54849 157 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 SYNJ2BPP57105 145 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 SPINK13Q1W4C9 94 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 NSUN5P1Q3KNT7 163 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 Q8N1Y9 231 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 KMT2BQ9UMN6 2715 aaPredicted RBP5.2□□□□□ -1.58
TDP1-213ENST00000555880 M0QY20 66 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 ELANEP08246 267 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 LGALS3P17931 250 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms