RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ZNF705FA8MVS1 300 aaPredicted RBP2.06□□□□□ -2.08
SRP54-209ENST00000555746 C9JQL5 133 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 M0R1X1 148 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 SOCS1O15524 211 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST1H2BKO60814 126 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 PITX3O75364 302 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 SFT2D2O95562 160 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 FSTL3O95633 263 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 CFDP00746 253 aaPredicted RBP2.06□□□□□ -2.08
SRP54-209ENST00000555746 GYPAP02724 150 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 BGLAPP02818 100 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 MT-ATP8P03928 68 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 TCRAP04437 139 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST1H2BJP06899 126 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 ZNF705BP0CI00 300 aaPredicted RBP2.06□□□□□ -2.08
SRP54-209ENST00000555746 SLC25A4P12235 298 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HLA-DRB4P13762 266 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST1H2BOP23527 126 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 IL3RAP26951 378 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST1H2BBP33778 126 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST1H2BDP58876 126 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST1H2BCP62807 126 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST2H2BEQ16778 126 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 RSPO1Q2MKA7 263 aaPredicted RBP2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.06□□□□□ -2.08
SRP54-209ENST00000555746 LINC01545Q5VT33 79 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 OR2T2Q6IF00 324 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HEPN1Q6WQI6 88 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 TIFABQ6ZNK6 161 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 LINC00173Q6ZV60 143 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 PRNTQ86SH4 94 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 MDP1Q86V88 176 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 RPP25LQ8N5L8 163 aaKnown RBP2.06□□□□□ -2.08
SRP54-209ENST00000555746 LINC00311Q8N616 119 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 ZNF721Q8TF20 911 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST1H2BHQ93079 126 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 MAL2Q969L2 176 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST1H2BNQ99877 126 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HIST1H2BMQ99879 126 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 HDHD3Q9BSH5 251 aaPredicted RBP2.06□□□□□ -2.08
SRP54-209ENST00000555746 TMEM243Q9BU79 118 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 AGPAT4-IT1Q9H0P7 198 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 FAM60AQ9NP50 221 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 C21orf62Q9NYP8 219 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 RNF11Q9Y3C5 154 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 F11RQ9Y624 299 aaKnown RBP2.06□□□□□ -2.08
SRP54-209ENST00000555746 HLA-DRB4X5D2U9 266 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 EXPH5Q8NEV8 1989 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 ARFGEF3Q5TH69 2177 aa2.06□□□□□ -2.08
SRP54-209ENST00000555746 IGLV4-69A0A075B6H9 119 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 IGLV11-55A0A075B6I3 123 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 TRBV20-1A0A075B6N2 111 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 IGKV1-27A0A075B6S5 117 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 A0A096LNT2 108 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 FAM24AA6NFZ4 105 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 M0R129 80 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 M0R2P5 195 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 M0R378 163 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 NDUFB6O95139 128 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 UBL3O95164 117 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 IGLV3-27P01718 113 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 SRP19P09132 144 aaKnown RBP2.05□□□□□ -2.08
SRP54-209ENST00000555746 SLC25A6P12236 298 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 TPT1P13693 172 aaKnown RBP2.05□□□□□ -2.08
SRP54-209ENST00000555746 S100A4P26447 101 aaKnown RBP2.05□□□□□ -2.08
SRP54-209ENST00000555746 POLR2IP36954 125 aaKnown RBP2.05□□□□□ -2.08
SRP54-209ENST00000555746 ASIPP42127 132 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 HINT1P49773 126 aaPredicted RBP2.05□□□□□ -2.08
SRP54-209ENST00000555746 ZNF138P52744 262 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 LINC00313P59037 77 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 TAS2R45P59539 299 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 SNRPFP62306 86 aaKnown RBP2.05□□□□□ -2.08
SRP54-209ENST00000555746 UBE2BP63146 152 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 SEC11AP67812 179 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 HBBP68871 147 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 EBI3Q14213 229 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 LGALS9BQ3B8N2 356 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 KRTAP13-3Q3SY46 172 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 TDRG1Q3Y452 100 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 LGALSLQ3ZCW2 172 aaPredicted RBP2.05□□□□□ -2.08
SRP54-209ENST00000555746 EBLN2Q6P2I7 272 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 TEN1Q86WV5 123 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 BPIFA4PQ86YQ2 179 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 C10orf111Q8N326 155 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 APCDD1LQ8NCL9 501 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 OR5C1Q8NGR4 320 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 OR5H2Q8NGV7 314 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 DCANP1Q8TF63 244 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 H1FXQ92522 213 aaKnown RBP2.05□□□□□ -2.08
SRP54-209ENST00000555746 S100A16Q96FQ6 103 aaKnown RBP2.05□□□□□ -2.08
SRP54-209ENST00000555746 IMMP2LQ96T52 175 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 TIMM17AQ99595 171 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 ST20Q9HBF5 79 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 SLC39A9Q9NUM3 307 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 TXNL4BQ9NX01 149 aaKnown RBP2.05□□□□□ -2.08
SRP54-209ENST00000555746 OR5V1Q9UGF6 321 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 RABAC1Q9UI14 185 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 PRO0461Q9UI25 63 aa2.05□□□□□ -2.08
SRP54-209ENST00000555746 ZNF706Q9Y5V0 76 aaPredicted RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms