RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-204ENST00000555690 NKX6-2Q9C056 277 aaPredicted RBP16.12■□□□□ 0.17
PPP4R4-204ENST00000555690 RHODO00212 210 aa16.11■□□□□ 0.17
PPP4R4-204ENST00000555690 DNAJC30Q96LL9 226 aa16.11■□□□□ 0.17
PPP4R4-204ENST00000555690 A0A087WWL8 130 aa16.1■□□□□ 0.17
PPP4R4-204ENST00000555690 AKR1C8PQ5T2L2 129 aa16.1■□□□□ 0.17
PPP4R4-204ENST00000555690 COX8CQ7Z4L0 72 aa16.1■□□□□ 0.17
PPP4R4-204ENST00000555690 NIT1Q86X76 327 aa16.1■□□□□ 0.17
PPP4R4-204ENST00000555690 ZFP30Q9Y2G7 519 aa16.1■□□□□ 0.17
PPP4R4-204ENST00000555690 COX11Q9Y6N1 276 aa16.1■□□□□ 0.17
PPP4R4-204ENST00000555690 URGCP-MRPS24S4R325 110 aa16.1■□□□□ 0.17
PPP4R4-204ENST00000555690 LINC01620Q4KN68 170 aa16.09■□□□□ 0.17
PPP4R4-204ENST00000555690 FAM162BQ5T6X4 162 aa16.09■□□□□ 0.17
PPP4R4-204ENST00000555690 SFRP2Q96HF1 295 aa16.09■□□□□ 0.17
PPP4R4-204ENST00000555690 PHLDA3Q9Y5J5 127 aa16.09■□□□□ 0.17
PPP4R4-204ENST00000555690 TMSB15BA0A087X1C1 80 aa16.08■□□□□ 0.16
PPP4R4-204ENST00000555690 LINC00528Q8N1L1 170 aa16.08■□□□□ 0.16
PPP4R4-204ENST00000555690 KLK12Q9UKR0 248 aa16.08■□□□□ 0.16
PPP4R4-204ENST00000555690 J3QL48 77 aa16.07■□□□□ 0.16
PPP4R4-204ENST00000555690 M0R381 172 aa16.07■□□□□ 0.16
PPP4R4-204ENST00000555690 PLA2G1BP04054 148 aaKnown RBP16.07■□□□□ 0.16
PPP4R4-204ENST00000555690 UBE2G1P62253 170 aa16.07■□□□□ 0.16
PPP4R4-204ENST00000555690 RMI2Q96E14 147 aa16.07■□□□□ 0.16
PPP4R4-204ENST00000555690 FMC1Q96HJ9 113 aa16.07■□□□□ 0.16
PPP4R4-204ENST00000555690 IGKV2D-24A0A075B6R9 120 aa16.06■□□□□ 0.16
PPP4R4-204ENST00000555690 MAP1LC3B2A6NCE7 125 aa16.06■□□□□ 0.16
PPP4R4-204ENST00000555690 TPT1P13693 172 aaKnown RBP16.06■□□□□ 0.16
PPP4R4-204ENST00000555690 ZNF674Q2M3X9 581 aa16.06■□□□□ 0.16
PPP4R4-204ENST00000555690 MAP1LC3BQ9GZQ8 125 aa16.06■□□□□ 0.16
PPP4R4-204ENST00000555690 LINC01559Q495D7 138 aa16.05■□□□□ 0.16
PPP4R4-204ENST00000555690 Q8N976 141 aa16.05■□□□□ 0.16
PPP4R4-204ENST00000555690 RBFOX3A6NFN3 312 aa16.04■□□□□ 0.16
PPP4R4-204ENST00000555690 SEC11BP0C7V7 166 aa16.04■□□□□ 0.16
PPP4R4-204ENST00000555690 UBE2WQ96B02 151 aa16.04■□□□□ 0.16
PPP4R4-204ENST00000555690 BATF3Q9NR55 127 aa16.04■□□□□ 0.16
PPP4R4-204ENST00000555690 A0A087WX48 190 aa16.03■□□□□ 0.16
PPP4R4-204ENST00000555690 LTAP01374 205 aa16.03■□□□□ 0.16
PPP4R4-204ENST00000555690 CST9LP1Q5W188 147 aa16.03■□□□□ 0.16
PPP4R4-204ENST00000555690 SCXQ7RTU7 201 aa16.02■□□□□ 0.16
PPP4R4-204ENST00000555690 ZFP82Q8N141 532 aa16.02■□□□□ 0.16
PPP4R4-204ENST00000555690 CYTL1Q9NRR1 136 aa16.02■□□□□ 0.16
PPP4R4-204ENST00000555690 TRBV10-1A0A0K0K1A3 114 aa16.01■□□□□ 0.15
PPP4R4-204ENST00000555690 TRBV6-1A0A0K0K1D8 114 aa16.01■□□□□ 0.15
PPP4R4-204ENST00000555690 G3V3Q6 166 aa16.01■□□□□ 0.15
PPP4R4-204ENST00000555690 RPL36AP83881 106 aaKnown RBP16.01■□□□□ 0.15
PPP4R4-204ENST00000555690 RPL36ALQ969Q0 106 aaKnown RBP16.01■□□□□ 0.15
PPP4R4-204ENST00000555690 FHITP49789 147 aa16■□□□□ 0.15
PPP4R4-204ENST00000555690 UBE2D3P61077 147 aa16■□□□□ 0.15
PPP4R4-204ENST00000555690 UBE2D2P62837 147 aa16■□□□□ 0.15
PPP4R4-204ENST00000555690 ELOBQ15370 118 aa16■□□□□ 0.15
PPP4R4-204ENST00000555690 KCNIP4Q6PIL6 250 aa16■□□□□ 0.15
PPP4R4-204ENST00000555690 TCEAL7Q9BRU2 100 aa16■□□□□ 0.15
PPP4R4-204ENST00000555690 CHCHD7Q9BUK0 85 aa16■□□□□ 0.15
PPP4R4-204ENST00000555690 TRBV7-3A0A075B6L6 115 aa15.99■□□□□ 0.15
PPP4R4-204ENST00000555690 ARPC5O15511 151 aa15.99■□□□□ 0.15
PPP4R4-204ENST00000555690 AKR1C3P42330 323 aa15.99■□□□□ 0.15
PPP4R4-204ENST00000555690 STOML3Q8TAV4 291 aa15.99■□□□□ 0.15
PPP4R4-204ENST00000555690 DEFB104AQ8WTQ1 72 aa15.98■□□□□ 0.15
PPP4R4-204ENST00000555690 TMEM262E9PQX1 116 aa15.97■□□□□ 0.15
PPP4R4-204ENST00000555690 PAGE4O60829 102 aa15.97■□□□□ 0.15
PPP4R4-204ENST00000555690 ATRAIDQ6UW56 229 aa15.97■□□□□ 0.15
PPP4R4-204ENST00000555690 KRTAP29-1A8MX34 341 aaPredicted RBP15.96■□□□□ 0.15
PPP4R4-204ENST00000555690 RPL19P84098 196 aaKnown RBP15.96■□□□□ 0.15
PPP4R4-204ENST00000555690 Q0VG73 95 aa15.96■□□□□ 0.15
PPP4R4-204ENST00000555690 OR10G8Q8NGN5 311 aa15.96■□□□□ 0.15
PPP4R4-204ENST00000555690 CHAC1Q9BUX1 264 aa15.96■□□□□ 0.15
PPP4R4-204ENST00000555690 LRP1Q07954 4544 aaKnown RBP15.95■□□□□ 0.14
PPP4R4-204ENST00000555690 TRBV6-8A0A0A6YYG3 113 aa15.95■□□□□ 0.14
PPP4R4-204ENST00000555690 RAB4BP61018 213 aa15.95■□□□□ 0.14
PPP4R4-204ENST00000555690 OR10AG1Q8NH19 301 aa15.95■□□□□ 0.14
PPP4R4-204ENST00000555690 ZNF56Q15929 161 aa15.94■□□□□ 0.14
PPP4R4-204ENST00000555690 ENHOQ6UWT2 76 aa15.94■□□□□ 0.14
PPP4R4-204ENST00000555690 NEXN-AS1Q8NBZ9 246 aa15.94■□□□□ 0.14
PPP4R4-204ENST00000555690 CIRBP-AS1Q8TBR5 109 aa15.93■□□□□ 0.14
PPP4R4-204ENST00000555690 C1orf43Q9BWL3 253 aa15.93■□□□□ 0.14
PPP4R4-204ENST00000555690 A0A1B0GV50 99 aa15.92■□□□□ 0.14
PPP4R4-204ENST00000555690 C15orf54Q8N8G6 183 aa15.92■□□□□ 0.14
PPP4R4-204ENST00000555690 SFT2D1Q8WV19 159 aa15.92■□□□□ 0.14
PPP4R4-204ENST00000555690 MUC21A0A0G2JKD1 596 aa15.91■□□□□ 0.14
PPP4R4-204ENST00000555690 MUC21A0A140T8X8 626 aa15.91■□□□□ 0.14
PPP4R4-204ENST00000555690 SCO2A0A1W2PP80 73 aa15.91■□□□□ 0.14
PPP4R4-204ENST00000555690 SMLR1H3BR10 107 aa15.91■□□□□ 0.14
PPP4R4-204ENST00000555690 MPV17L2Q567V2 206 aa15.91■□□□□ 0.14
PPP4R4-204ENST00000555690 PRR27Q6MZM9 219 aa15.91■□□□□ 0.14
PPP4R4-204ENST00000555690 ZNF471Q9BX82 626 aaPredicted RBP15.91■□□□□ 0.14
PPP4R4-204ENST00000555690 CRPP02741 224 aa15.9■□□□□ 0.14
PPP4R4-204ENST00000555690 S100A9P06702 114 aaKnown RBP15.9■□□□□ 0.14
PPP4R4-204ENST00000555690 KRTAP10-4P60372 401 aaPredicted RBP15.9■□□□□ 0.14
PPP4R4-204ENST00000555690 BAGE2Q86Y30 109 aa15.9■□□□□ 0.14
PPP4R4-204ENST00000555690 FAM213BQ8TBF2 198 aa15.9■□□□□ 0.14
PPP4R4-204ENST00000555690 MLST8Q9BVC4 326 aa15.9■□□□□ 0.14
PPP4R4-204ENST00000555690 ANGP03950 147 aaKnown RBP15.89■□□□□ 0.13
PPP4R4-204ENST00000555690 SSTP61278 116 aa15.89■□□□□ 0.13
PPP4R4-204ENST00000555690 C14orf177Q52M58 125 aa15.89■□□□□ 0.13
PPP4R4-204ENST00000555690 MBD3L1Q8WWY6 194 aa15.89■□□□□ 0.13
PPP4R4-204ENST00000555690 CHCHD5Q9BSY4 110 aa15.89■□□□□ 0.13
PPP4R4-204ENST00000555690 SSBP4Q9BWG4 385 aaPredicted RBP15.89■□□□□ 0.13
PPP4R4-204ENST00000555690 F5H697 171 aa15.88■□□□□ 0.13
PPP4R4-204ENST00000555690 SNAI2O43623 268 aa15.88■□□□□ 0.13
PPP4R4-204ENST00000555690 CXCL1P09341 107 aa15.88■□□□□ 0.13
PPP4R4-204ENST00000555690 SPANXN1Q5VSR9 72 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms