RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 C11orf45Q8TAV5 145 aa8.03□□□□□ -1.12
SHMT2-220ENST00000555634 TMEM191AQ9H0A3 160 aa8.03□□□□□ -1.12
SHMT2-220ENST00000555634 TRGV4A0A0C4DH28 118 aa8.02□□□□□ -1.13
SHMT2-220ENST00000555634 A0A1B0GXF2 115 aa8.02□□□□□ -1.13
SHMT2-220ENST00000555634 PPP1R17O96001 155 aa8.02□□□□□ -1.13
SHMT2-220ENST00000555634 ATP5G1P05496 136 aa8.02□□□□□ -1.13
SHMT2-220ENST00000555634 ZFP2Q6ZN57 461 aa8.02□□□□□ -1.13
SHMT2-220ENST00000555634 C14orf178Q8N769 122 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-220ENST00000555634 GNB1LQ9BYB4 327 aa8.02□□□□□ -1.13
SHMT2-220ENST00000555634 U3KQK5 164 aa8.02□□□□□ -1.13
SHMT2-220ENST00000555634 A0A087WWL8 130 aa8.01□□□□□ -1.13
SHMT2-220ENST00000555634 RPS10P46783 165 aaKnown RBP8.01□□□□□ -1.13
SHMT2-220ENST00000555634 SLAQ13239 276 aa8.01□□□□□ -1.13
SHMT2-220ENST00000555634 MRAP2Q96G30 205 aa8.01□□□□□ -1.13
SHMT2-220ENST00000555634 C18orf15Q96N68 181 aa8.01□□□□□ -1.13
SHMT2-220ENST00000555634 TRAPPC1Q9Y5R8 145 aa8.01□□□□□ -1.13
SHMT2-220ENST00000555634 TGP01266 2768 aa8.01□□□□□ -1.13
SHMT2-220ENST00000555634 NACAE9PAV3 2078 aa8.01□□□□□ -1.13
SHMT2-220ENST00000555634 RS1O15537 224 aa8□□□□□ -1.13
SHMT2-220ENST00000555634 APCSP02743 223 aa8□□□□□ -1.13
SHMT2-220ENST00000555634 PPBPP02775 128 aa8□□□□□ -1.13
SHMT2-220ENST00000555634 RAB5AP20339 215 aa8□□□□□ -1.13
SHMT2-220ENST00000555634 EVI2AP22794 236 aa8□□□□□ -1.13
SHMT2-220ENST00000555634 CFAP126Q5VTH2 177 aa8□□□□□ -1.13
SHMT2-220ENST00000555634 MSRB1Q9NZV6 116 aa8□□□□□ -1.13
SHMT2-220ENST00000555634 MEGF8Q7Z7M0 2845 aa8□□□□□ -1.13
SHMT2-220ENST00000555634 NBEAL2Q6ZNJ1 2754 aa7.99□□□□□ -1.13
SHMT2-220ENST00000555634 IGHV3-53P01767 116 aa7.99□□□□□ -1.13
SHMT2-220ENST00000555634 HTN3P15516 51 aa7.99□□□□□ -1.13
SHMT2-220ENST00000555634 ZNF575Q86XF7 245 aa7.99□□□□□ -1.13
SHMT2-220ENST00000555634 LINC00612Q8N6U2 182 aa7.99□□□□□ -1.13
SHMT2-220ENST00000555634 GATD1Q8NB37 220 aa7.99□□□□□ -1.13
SHMT2-220ENST00000555634 PRADC1Q9BSG0 188 aa7.99□□□□□ -1.13
SHMT2-220ENST00000555634 MRPL18Q9H0U6 180 aaKnown RBP7.99□□□□□ -1.13
SHMT2-220ENST00000555634 CELA1Q9UNI1 258 aa7.99□□□□□ -1.13
SHMT2-220ENST00000555634 CKS2P33552 79 aa7.98□□□□□ -1.13
SHMT2-220ENST00000555634 FABP9Q0Z7S8 132 aa7.98□□□□□ -1.13
SHMT2-220ENST00000555634 RHOHQ15669 191 aa7.98□□□□□ -1.13
SHMT2-220ENST00000555634 FAM104BQ5XKR9 115 aa7.98□□□□□ -1.13
SHMT2-220ENST00000555634 TMEM136Q6ZRR5 245 aa7.98□□□□□ -1.13
SHMT2-220ENST00000555634 AMN1Q8IY45 258 aa7.98□□□□□ -1.13
SHMT2-220ENST00000555634 ORMDL3Q8N138 153 aa7.98□□□□□ -1.13
SHMT2-220ENST00000555634 CMYA5Q8N3K9 4069 aa7.97□□□□□ -1.13
SHMT2-220ENST00000555634 IGHV3-73A0A0B4J1V6 119 aa7.97□□□□□ -1.13
SHMT2-220ENST00000555634 TRAV10A0A0B4J240 114 aa7.97□□□□□ -1.13
SHMT2-220ENST00000555634 F5H768 121 aa7.97□□□□□ -1.13
SHMT2-220ENST00000555634 K7EQD1 137 aa7.97□□□□□ -1.13
SHMT2-220ENST00000555634 YPEL4Q96NS1 127 aa7.97□□□□□ -1.13
SHMT2-220ENST00000555634 LAMTOR2Q9Y2Q5 125 aa7.97□□□□□ -1.13
SHMT2-220ENST00000555634 TRBV10-1A0A0K0K1A3 114 aa7.96□□□□□ -1.14
SHMT2-220ENST00000555634 TRBV6-4A0A1B0GX49 114 aa7.96□□□□□ -1.14
SHMT2-220ENST00000555634 COLCA2A8K830 154 aa7.96□□□□□ -1.14
SHMT2-220ENST00000555634 OR10J3Q5JRS4 329 aa7.96□□□□□ -1.14
SHMT2-220ENST00000555634 SUMO4Q6EEV6 95 aa7.96□□□□□ -1.14
SHMT2-220ENST00000555634 ZNF479Q96JC4 524 aa7.96□□□□□ -1.14
SHMT2-220ENST00000555634 JPT2Q9H910 190 aa7.96□□□□□ -1.14
SHMT2-220ENST00000555634 PRO0255Q9UI72 69 aa7.96□□□□□ -1.14
SHMT2-220ENST00000555634 TNFRSF18Q9Y5U5 241 aa7.96□□□□□ -1.14
SHMT2-220ENST00000555634 DEFB131BA0A096LNP1 70 aa7.95□□□□□ -1.14
SHMT2-220ENST00000555634 D6R8Y8 96 aa7.95□□□□□ -1.14
SHMT2-220ENST00000555634 CRYGDP07320 174 aa7.95□□□□□ -1.14
SHMT2-220ENST00000555634 RAB4AP20338 218 aa7.95□□□□□ -1.14
SHMT2-220ENST00000555634 NANOS2P60321 138 aaKnown RBP7.95□□□□□ -1.14
SHMT2-220ENST00000555634 RPL36AP83881 106 aaKnown RBP7.95□□□□□ -1.14
SHMT2-220ENST00000555634 C12orf74Q32Q52 190 aa7.95□□□□□ -1.14
SHMT2-220ENST00000555634 MRPL51Q4U2R6 128 aaKnown RBP7.95□□□□□ -1.14
SHMT2-220ENST00000555634 Q6ZTC4 211 aa7.95□□□□□ -1.14
SHMT2-220ENST00000555634 RPL36ALQ969Q0 106 aaKnown RBP7.95□□□□□ -1.14
SHMT2-220ENST00000555634 PRELID3AQ96N28 172 aa7.95□□□□□ -1.14
SHMT2-220ENST00000555634 SAMD10Q9BYL1 202 aa7.95□□□□□ -1.14
SHMT2-220ENST00000555634 MAP1LC3AQ9H492 121 aa7.95□□□□□ -1.14
SHMT2-220ENST00000555634 HHLA3Q9XRX5 114 aa7.95□□□□□ -1.14
SHMT2-220ENST00000555634 C1orf196B1AJZ1 125 aa7.94□□□□□ -1.14
SHMT2-220ENST00000555634 PHOX2AO14813 284 aa7.94□□□□□ -1.14
SHMT2-220ENST00000555634 PAX4O43316 350 aa7.94□□□□□ -1.14
SHMT2-220ENST00000555634 PMCHP20382 165 aa7.94□□□□□ -1.14
SHMT2-220ENST00000555634 SH2D6Q7Z4S9 175 aa7.94□□□□□ -1.14
SHMT2-220ENST00000555634 DNAJC30Q96LL9 226 aa7.94□□□□□ -1.14
SHMT2-220ENST00000555634 EDA2RQ9HAV5 297 aa7.94□□□□□ -1.14
SHMT2-220ENST00000555634 KIF25-AS1Q9Y6Z4 181 aa7.94□□□□□ -1.14
SHMT2-220ENST00000555634 TRAV26-2A0A0B4J265 109 aa7.93□□□□□ -1.14
SHMT2-220ENST00000555634 NUPR2A6NF83 97 aa7.93□□□□□ -1.14
SHMT2-220ENST00000555634 NCR2O95944 276 aa7.93□□□□□ -1.14
SHMT2-220ENST00000555634 GATA1P15976 413 aaPredicted RBP7.93□□□□□ -1.14
SHMT2-220ENST00000555634 SLC25A29Q8N8R3 303 aa7.93□□□□□ -1.14
SHMT2-220ENST00000555634 ST20Q9HBF5 79 aa7.93□□□□□ -1.14
SHMT2-220ENST00000555634 NIT2Q9NQR4 276 aa7.93□□□□□ -1.14
SHMT2-220ENST00000555634 ICOSQ9Y6W8 199 aa7.93□□□□□ -1.14
SHMT2-220ENST00000555634 TENM3Q9P273 2699 aa7.93□□□□□ -1.14
SHMT2-220ENST00000555634 DNAH3Q8TD57 4116 aa7.93□□□□□ -1.14
SHMT2-220ENST00000555634 TCAPO15273 167 aa7.92□□□□□ -1.14
SHMT2-220ENST00000555634 TRGC2P03986 189 aa7.92□□□□□ -1.14
SHMT2-220ENST00000555634 SRIP30626 198 aa7.92□□□□□ -1.14
SHMT2-220ENST00000555634 RAB5BP61020 215 aa7.92□□□□□ -1.14
SHMT2-220ENST00000555634 UFSP1Q6NVU6 142 aa7.92□□□□□ -1.14
SHMT2-220ENST00000555634 POM121L12Q8N7R1 296 aa7.92□□□□□ -1.14
SHMT2-220ENST00000555634 RNF185Q96GF1 192 aa7.92□□□□□ -1.14
SHMT2-220ENST00000555634 KLK5Q9Y337 293 aaPredicted RBP7.92□□□□□ -1.14
SHMT2-220ENST00000555634 TRBV7-3A0A075B6L6 115 aa7.91□□□□□ -1.14
SHMT2-220ENST00000555634 TRAV26-1A0A087WT03 109 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 209.6 ms