RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 EIF3GO75821 320 aaKnown RBP eCLIP6.01□□□□□ -1.45
SCFD1-215ENST00000555259 S100A4P26447 101 aaKnown RBP6.01□□□□□ -1.45
SCFD1-215ENST00000555259 RPL36AP83881 106 aaKnown RBP6.01□□□□□ -1.45
SCFD1-215ENST00000555259 FAM74A4Q5TZK3 123 aa6.01□□□□□ -1.45
SCFD1-215ENST00000555259 CLPSL2Q6UWE3 100 aa6.01□□□□□ -1.45
SCFD1-215ENST00000555259 OR5C1Q8NGR4 320 aa6.01□□□□□ -1.45
SCFD1-215ENST00000555259 RPL36ALQ969Q0 106 aaKnown RBP6.01□□□□□ -1.45
SCFD1-215ENST00000555259 TRBV7-3A0A075B6L6 115 aa6□□□□□ -1.45
SCFD1-215ENST00000555259 IGKV3D-20A0A0C4DH25 116 aa6□□□□□ -1.45
SCFD1-215ENST00000555259 TRBV10-1A0A0K0K1A3 114 aa6□□□□□ -1.45
SCFD1-215ENST00000555259 TAS2R45P59539 299 aa6□□□□□ -1.45
SCFD1-215ENST00000555259 NHLH2Q02577 135 aa6□□□□□ -1.45
SCFD1-215ENST00000555259 RAB32Q13637 225 aa6□□□□□ -1.45
SCFD1-215ENST00000555259 WDR61Q9GZS3 305 aaKnown RBP6□□□□□ -1.45
SCFD1-215ENST00000555259 MUC21A0A0G2JKD1 596 aa5.99□□□□□ -1.45
SCFD1-215ENST00000555259 TCRBP04435 133 aa5.99□□□□□ -1.45
SCFD1-215ENST00000555259 BTCP35070 178 aa5.99□□□□□ -1.45
SCFD1-215ENST00000555259 SRSF9Q13242 221 aaKnown RBP eCLIP5.99□□□□□ -1.45
SCFD1-215ENST00000555259 SMUG1Q53HV7 270 aa5.99□□□□□ -1.45
SCFD1-215ENST00000555259 LINC00269Q8N2A0 174 aa5.99□□□□□ -1.45
SCFD1-215ENST00000555259 MRPS26Q9BYN8 205 aaKnown RBP5.99□□□□□ -1.45
SCFD1-215ENST00000555259 AP5S1Q9NUS5 200 aa5.99□□□□□ -1.45
SCFD1-215ENST00000555259 IL36BQ9NZH7 164 aa5.99□□□□□ -1.45
SCFD1-215ENST00000555259 SERTM2A0A1B0GWG4 89 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 C17orf112F2Z3M2 114 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 PTTG1O95997 202 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 TMBIM6P55061 237 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 PKIAP61925 76 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 COX6A2Q02221 97 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 IL15RAQ13261 267 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 ZFP69Q49AA0 526 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 LYPD6BQ8NI32 183 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 CHCHD5Q9BSY4 110 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 FSIP2Q5CZC0 6907 aa5.98□□□□□ -1.45
SCFD1-215ENST00000555259 IGLV10-54A0A075B6I4 117 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 H3BVH4 76 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 RBX1P62877 108 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 MAJINQ3KP22 176 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 STPG4Q8N801 248 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 VAX2Q9UIW0 290 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 PSG8Q9UQ74 426 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 IGKV2-24A0A0C4DH68 120 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 H3BMQ9 156 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 H7C1H1 209 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 TCRAP04437 139 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 OR10G8Q8NGN5 311 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 SFRP2Q96HF1 295 aa5.97□□□□□ -1.45
SCFD1-215ENST00000555259 NDUFS6O75380 124 aaKnown RBP5.96□□□□□ -1.46
SCFD1-215ENST00000555259 FLI1Q01543 452 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-215ENST00000555259 TRIQKQ629K1 86 aa5.96□□□□□ -1.46
SCFD1-215ENST00000555259 PQLC2Q6ZP29 291 aa5.96□□□□□ -1.46
SCFD1-215ENST00000555259 PRNTQ86SH4 94 aa5.96□□□□□ -1.46
SCFD1-215ENST00000555259 OR11H4Q8NGC9 324 aa5.96□□□□□ -1.46
SCFD1-215ENST00000555259 PRSS3P2Q8NHM4 247 aa5.96□□□□□ -1.46
SCFD1-215ENST00000555259 FAM231BA6NCW3 169 aa5.95□□□□□ -1.46
SCFD1-215ENST00000555259 CENPXA8MT69 81 aa5.95□□□□□ -1.46
SCFD1-215ENST00000555259 K7EQM0 130 aa5.95□□□□□ -1.46
SCFD1-215ENST00000555259 ARMS2P0C7Q2 107 aa5.95□□□□□ -1.46
SCFD1-215ENST00000555259 S100A5P33763 92 aa5.95□□□□□ -1.46
SCFD1-215ENST00000555259 REG3AQ06141 175 aa5.95□□□□□ -1.46
SCFD1-215ENST00000555259 C5orf17Q8NAS9 161 aa5.95□□□□□ -1.46
SCFD1-215ENST00000555259 SEC22CQ9BRL7 303 aa5.95□□□□□ -1.46
SCFD1-215ENST00000555259 B4DEV8 164 aa5.94□□□□□ -1.46
SCFD1-215ENST00000555259 GAGE6Q13070 117 aa5.94□□□□□ -1.46
SCFD1-215ENST00000555259 CNPY1Q3B7I2 92 aa5.94□□□□□ -1.46
SCFD1-215ENST00000555259 SAPCD1Q5SSQ6 148 aa5.94□□□□□ -1.46
SCFD1-215ENST00000555259 Q6ZRP5 223 aa5.94□□□□□ -1.46
SCFD1-215ENST00000555259 NTM-AS1Q6ZSK4 140 aa5.94□□□□□ -1.46
SCFD1-215ENST00000555259 NEXN-AS1Q8NBZ9 246 aa5.94□□□□□ -1.46
SCFD1-215ENST00000555259 TRAV8-4A0A0B4J246 113 aa5.93□□□□□ -1.46
SCFD1-215ENST00000555259 FABP5P3A8MUU1 101 aa5.93□□□□□ -1.46
SCFD1-215ENST00000555259 M0R381 172 aa5.93□□□□□ -1.46
SCFD1-215ENST00000555259 NOL3O60936 208 aaKnown RBP5.93□□□□□ -1.46
SCFD1-215ENST00000555259 P01737 135 aa5.93□□□□□ -1.46
SCFD1-215ENST00000555259 RPS10P46783 165 aaKnown RBP5.93□□□□□ -1.46
SCFD1-215ENST00000555259 DNLZQ5SXM8 178 aa5.93□□□□□ -1.46
SCFD1-215ENST00000555259 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-215ENST00000555259 PHLDA3Q9Y5J5 127 aa5.93□□□□□ -1.46
SCFD1-215ENST00000555259 A0A1W2PPV4 95 aa5.93□□□□□ -1.46
SCFD1-215ENST00000555259 HMGB3O15347 200 aaKnown RBP5.93□□□□□ -1.46
SCFD1-215ENST00000555259 IFNA7P01567 189 aa5.93□□□□□ -1.46
SCFD1-215ENST00000555259 RAB5CP51148 216 aa5.93□□□□□ -1.46
SCFD1-215ENST00000555259 TRAV6A0A075B6T7 132 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 A0A096LNI7 61 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 GRIFINA4D1Z8 144 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 KRBOX1C9JBD0 128 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 M0R036 132 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 ARL14EPLP0DKL9 152 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 GZMBP10144 247 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 RAB4BP61018 213 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 TMEM97Q5BJF2 176 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 PRR27Q6MZM9 219 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 ZNF664Q8N3J9 261 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 C15orf56Q8N910 161 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 PSORS1C2Q9UIG4 136 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 EPDR1Q9UM22 224 aa5.92□□□□□ -1.46
SCFD1-215ENST00000555259 TRBV25-1A0A075B6N4 114 aa5.91□□□□□ -1.46
SCFD1-215ENST00000555259 TRAV26-2A0A0B4J265 109 aa5.91□□□□□ -1.46
SCFD1-215ENST00000555259 TPT1P13693 172 aaKnown RBP5.91□□□□□ -1.46
SCFD1-215ENST00000555259 SUMO1P63165 101 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms