RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 KIF25-AS1Q9Y6Z4 181 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 A0A0J9YWU9 116 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 A0A1B0GW15 77 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 GAGE12BA1L429 117 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 GAGE7O76087 117 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 IGHV3-53P01767 116 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 MGPP08493 103 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 GAGE12FP0CL80 117 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 GAGE12GP0CL81 117 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 GAGE12IP0CL82 117 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 FAM104BQ5XKR9 115 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 SYT8Q8NBV8 401 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 SPXQ9BT56 116 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 CRYGDP07320 174 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 GATA1P15976 413 aaPredicted RBP7.66□□□□□ -1.18
TDP1-211ENST00000555178 RAB4AP20338 218 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 LINC00315P59091 139 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 DAZ2Q13117 558 aaKnown RBP7.66□□□□□ -1.18
TDP1-211ENST00000555178 MRPL51Q4U2R6 128 aaKnown RBP7.66□□□□□ -1.18
TDP1-211ENST00000555178 RASL10AQ92737 203 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 SPATA25Q9BR10 227 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 TP53TG1Q9Y2A0 90 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 SMIM9A6NGZ8 99 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 MT-ND6P03923 174 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 TRGC1P0CF51 173 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 DEFB130BP0DP73 79 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 DEFB130AP0DP74 79 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 FAM222AQ5U5X8 452 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 CFAP126Q5VTH2 177 aa7.66□□□□□ -1.18
TDP1-211ENST00000555178 D6R8Y8 96 aa7.65□□□□□ -1.18
TDP1-211ENST00000555178 S100A8P05109 93 aa7.65□□□□□ -1.18
TDP1-211ENST00000555178 MIFP14174 115 aa7.65□□□□□ -1.18
TDP1-211ENST00000555178 ZNF479Q96JC4 524 aa7.65□□□□□ -1.18
TDP1-211ENST00000555178 DPH3P1Q9H4G8 78 aa7.65□□□□□ -1.18
TDP1-211ENST00000555178 HIST1H2BKO60814 126 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 HIST1H2BJP06899 126 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 HIST1H2BOP23527 126 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 SRIP30626 198 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 HIST1H2BBP33778 126 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 HIST1H2BDP58876 126 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 HIST1H2BCP62807 126 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 HIST2H2BEQ16778 126 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.64□□□□□ -1.19
TDP1-211ENST00000555178 Q6ZSN1 163 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 HIST1H2BHQ93079 126 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 HIST1H2BNQ99877 126 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 HIST1H2BMQ99879 126 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 DNAH7Q8WXX0 4024 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 COX19Q49B96 90 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 UFSP1Q6NVU6 142 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 SMIM15Q7Z3B0 74 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 DKK2Q9UBU2 259 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 Q9UF83 564 aa7.64□□□□□ -1.19
TDP1-211ENST00000555178 TRGV2A0A075B6R0 118 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 C1orf196B1AJZ1 125 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 SMIM17P0DL12 118 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 ZNF56Q15929 161 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 IQCJQ1A5X6 159 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 SUMO4Q6EEV6 95 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 F5H697 171 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 RS1O15537 224 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 P0DMU3 169 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 FAM231AP0DMU4 169 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 FAM231CP0DMU5 169 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 LGALS9BQ3B8N2 356 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 PTH2Q96A98 100 aa7.63□□□□□ -1.19
TDP1-211ENST00000555178 RPL39LQ96EH5 51 aaKnown RBP7.63□□□□□ -1.19
TDP1-211ENST00000555178 ALKBH7Q9BT30 221 aaPredicted RBP7.63□□□□□ -1.19
TDP1-211ENST00000555178 A8MWV9 139 aa7.62□□□□□ -1.19
TDP1-211ENST00000555178 NPYP01303 97 aa7.62□□□□□ -1.19
TDP1-211ENST00000555178 CKS2P33552 79 aa7.62□□□□□ -1.19
TDP1-211ENST00000555178 OR4C5Q8NGB2 326 aa7.62□□□□□ -1.19
TDP1-211ENST00000555178 NANOS2P60321 138 aaKnown RBP7.62□□□□□ -1.19
TDP1-211ENST00000555178 LINC00612Q8N6U2 182 aa7.62□□□□□ -1.19
TDP1-211ENST00000555178 ZMAT4Q9H898 229 aa7.62□□□□□ -1.19
TDP1-211ENST00000555178 TENM2Q9NT68 2774 aa7.61□□□□□ -1.19
TDP1-211ENST00000555178 C12orf74Q32Q52 190 aa7.61□□□□□ -1.19
TDP1-211ENST00000555178 PIK3CD-AS1Q5SR53 167 aa7.61□□□□□ -1.19
TDP1-211ENST00000555178 U3KQK5 164 aa7.61□□□□□ -1.19
TDP1-211ENST00000555178 TRAV4A0A0B4J268 109 aa7.6□□□□□ -1.19
TDP1-211ENST00000555178 RAB5BP61020 215 aa7.6□□□□□ -1.19
TDP1-211ENST00000555178 ORMDL3Q8N138 153 aa7.6□□□□□ -1.19
TDP1-211ENST00000555178 NRACQ8N912 160 aa7.6□□□□□ -1.19
TDP1-211ENST00000555178 C18orf32Q8TCD1 76 aa7.6□□□□□ -1.19
TDP1-211ENST00000555178 DEFB104AQ8WTQ1 72 aa7.6□□□□□ -1.19
TDP1-211ENST00000555178 PRELID3AQ96N28 172 aa7.6□□□□□ -1.19
TDP1-211ENST00000555178 LYRM9A8MSI8 78 aa7.6□□□□□ -1.19
TDP1-211ENST00000555178 EDA2RQ9HAV5 297 aa7.6□□□□□ -1.19
TDP1-211ENST00000555178 LOC389332A0A1B0GUA5 103 aa7.59□□□□□ -1.19
TDP1-211ENST00000555178 M0QY20 66 aa7.59□□□□□ -1.19
TDP1-211ENST00000555178 HOXA5P20719 270 aa7.59□□□□□ -1.19
TDP1-211ENST00000555178 LINC00310P59036 64 aa7.59□□□□□ -1.19
TDP1-211ENST00000555178 C11orf68Q9H3H3 251 aaKnown RBP7.59□□□□□ -1.19
TDP1-211ENST00000555178 TNFRSF6BO95407 300 aa7.59□□□□□ -1.19
TDP1-211ENST00000555178 SPART-AS1P0CW21 52 aa7.59□□□□□ -1.19
TDP1-211ENST00000555178 DAD1P61803 113 aa7.59□□□□□ -1.19
TDP1-211ENST00000555178 Q6ZTC4 211 aa7.59□□□□□ -1.19
TDP1-211ENST00000555178 NEGR1Q7Z3B1 354 aa7.59□□□□□ -1.19
TDP1-211ENST00000555178 MRAP2Q96G30 205 aa7.59□□□□□ -1.19
TDP1-211ENST00000555178 NDUFAF3Q9BU61 184 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms