RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 BORCS7Q96B45 105 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 CHCHD1Q96BP2 118 aaKnown RBP6.55□□□□□ -1.36
TDP1-210ENST00000554976 FAM110AQ9BQ89 295 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 GTSF1LQ9H1H1 148 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 D6R8Y8 96 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 IGLV1-51P01701 117 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 LINC00467Q9BRT7 94 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 C19orf73Q9NVV2 129 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 KIF25-AS1Q9Y6Z4 181 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 NSD1Q96L73 2696 aaPredicted RBP6.55□□□□□ -1.36
TDP1-210ENST00000554976 A0A096LNJ9 63 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 KNCNA6PVL3 124 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 H3BVH4 76 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 IGLL1P15814 213 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 DEFB131AP59861 70 aa6.55□□□□□ -1.36
TDP1-210ENST00000554976 ACANP16112 2415 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 CCDC168Q8NDH2 2452 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 IGLV2-18A0A075B6J9 118 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 IGHV3-16A0A0C4DH30 117 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 M0R2Z0 102 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 LINC00315P59091 139 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 HSD52Q0P140 79 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 NRACQ8N912 160 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 IGHV1-24A0A0C4DH33 117 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 K7EP34 96 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 NUDT3O95989 172 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 BEAN1Q3B7T3 259 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 EBLN2Q6P2I7 272 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 LINC00482Q8N8I6 264 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 OR2K2Q8NGT1 345 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
TDP1-210ENST00000554976 AGRNO00468 2067 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 TRAV12-2A0A075B6T6 113 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 NPYP01303 97 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 ASIPP42127 132 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 DYNLRB2Q8TF09 96 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 SPATA25Q9BR10 227 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 HIVEP1P15822 2718 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 TRAV12-3A0A0B4J271 114 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 EVI2AP22794 236 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 SPINK13Q1W4C9 94 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 ORMDL3Q8N138 153 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 FAM19A2Q8N3H0 131 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 OR5A1Q8NGJ0 315 aa6.53□□□□□ -1.36
TDP1-210ENST00000554976 GEMIN7Q9H840 131 aaKnown RBP6.53□□□□□ -1.36
TDP1-210ENST00000554976 SMKR1H3BMG3 65 aa6.52□□□□□ -1.36
TDP1-210ENST00000554976 SPATA12Q7Z6I5 190 aa6.52□□□□□ -1.36
TDP1-210ENST00000554976 SPATA3Q8NHX4 192 aa6.52□□□□□ -1.36
TDP1-210ENST00000554976 CITED1Q99966 193 aa6.52□□□□□ -1.36
TDP1-210ENST00000554976 SONP18583 2426 aaKnown RBP6.52□□□□□ -1.37
TDP1-210ENST00000554976 OR4C46A6NHA9 309 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 CYSRT1A8MQ03 144 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 SPRY2O43597 315 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 TRPT1Q86TN4 253 aaKnown RBP6.52□□□□□ -1.37
TDP1-210ENST00000554976 DNAH3Q8TD57 4116 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 PRELID3AQ96N28 172 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 TLN2Q9Y4G6 2542 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 GAGE12HA6NDE8 117 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 PMCHP20382 165 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 SEC11AP67812 179 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 ATOH7Q8N100 152 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 IL17DQ8TAD2 202 aa6.52□□□□□ -1.37
TDP1-210ENST00000554976 IGHV1OR15-1A0A075B7D0 117 aa6.51□□□□□ -1.37
TDP1-210ENST00000554976 NCR2O95944 276 aa6.51□□□□□ -1.37
TDP1-210ENST00000554976 Q8N1Y9 231 aa6.51□□□□□ -1.37
TDP1-210ENST00000554976 SETXQ7Z333 2677 aaKnown RBP6.51□□□□□ -1.37
TDP1-210ENST00000554976 IGKV3-20P01619 116 aa6.51□□□□□ -1.37
TDP1-210ENST00000554976 IFI27P40305 119 aaPredicted RBP6.51□□□□□ -1.37
TDP1-210ENST00000554976 NSUN5P1Q3KNT7 163 aa6.51□□□□□ -1.37
TDP1-210ENST00000554976 RNASEKQ6P5S7 137 aaKnown RBP6.51□□□□□ -1.37
TDP1-210ENST00000554976 SLC25A34Q6PIV7 304 aa6.51□□□□□ -1.37
TDP1-210ENST00000554976 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.51□□□□□ -1.37
TDP1-210ENST00000554976 PTH2Q96A98 100 aa6.51□□□□□ -1.37
TDP1-210ENST00000554976 MDFICQ9P1T7 246 aa6.51□□□□□ -1.37
TDP1-210ENST00000554976 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
TDP1-210ENST00000554976 GIG44P09565 113 aaPredicted RBP6.5□□□□□ -1.37
TDP1-210ENST00000554976 GATA1P15976 413 aaPredicted RBP6.5□□□□□ -1.37
TDP1-210ENST00000554976 TNFRSF18Q9Y5U5 241 aa6.5□□□□□ -1.37
TDP1-210ENST00000554976 FN1P02751 2386 aaKnown RBP6.5□□□□□ -1.37
TDP1-210ENST00000554976 HERV-K104P63124 156 aa6.5□□□□□ -1.37
TDP1-210ENST00000554976 FAM159AQ6UWV7 190 aa6.5□□□□□ -1.37
TDP1-210ENST00000554976 C11orf72Q8NBR9 251 aa6.5□□□□□ -1.37
TDP1-210ENST00000554976 TNFRSF6BO95407 300 aa6.5□□□□□ -1.37
TDP1-210ENST00000554976 FXYD7P58549 80 aa6.5□□□□□ -1.37
TDP1-210ENST00000554976 SPANXN1Q5VSR9 72 aa6.5□□□□□ -1.37
TDP1-210ENST00000554976 LINC00173Q6ZV60 143 aa6.5□□□□□ -1.37
TDP1-210ENST00000554976 RASL10AQ92737 203 aa6.5□□□□□ -1.37
TDP1-210ENST00000554976 H3BRM9 83 aa6.49□□□□□ -1.37
TDP1-210ENST00000554976 M0R381 172 aa6.49□□□□□ -1.37
TDP1-210ENST00000554976 CKS2P33552 79 aa6.49□□□□□ -1.37
TDP1-210ENST00000554976 MRPL16Q9NX20 251 aaKnown RBP6.49□□□□□ -1.37
TDP1-210ENST00000554976 NACAE9PAV3 2078 aa6.49□□□□□ -1.37
TDP1-210ENST00000554976 TRAV26-2A0A0B4J265 109 aa6.49□□□□□ -1.37
TDP1-210ENST00000554976 CD7P09564 240 aa6.49□□□□□ -1.37
TDP1-210ENST00000554976 AP1S3Q96PC3 154 aa6.49□□□□□ -1.37
TDP1-210ENST00000554976 DPH3P1Q9H4G8 78 aa6.49□□□□□ -1.37
TDP1-210ENST00000554976 TEX48A0A1B0GUV7 120 aa6.48□□□□□ -1.37
TDP1-210ENST00000554976 J3QR89 54 aa6.48□□□□□ -1.37
TDP1-210ENST00000554976 HSBP1O75506 76 aa6.48□□□□□ -1.37
TDP1-210ENST00000554976 PHLDA3Q9Y5J5 127 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms