RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 NHLRC4P0CG21 123 aaPredicted RBP10.28□□□□□ -0.76
SHOX2-206ENST00000554685 SPART-AS1P0CW21 52 aa10.28□□□□□ -0.76
SHOX2-206ENST00000554685 EVI2AP22794 236 aa10.28□□□□□ -0.76
SHOX2-206ENST00000554685 FAM222AQ5U5X8 452 aa10.28□□□□□ -0.76
SHOX2-206ENST00000554685 FAM104BQ5XKR9 115 aa10.28□□□□□ -0.76
SHOX2-206ENST00000554685 Q6ZTI0 123 aa10.28□□□□□ -0.76
SHOX2-206ENST00000554685 C14orf178Q8N769 122 aaPredicted RBP10.28□□□□□ -0.76
SHOX2-206ENST00000554685 MRPL18Q9H0U6 180 aaKnown RBP10.28□□□□□ -0.76
SHOX2-206ENST00000554685 DKK2Q9UBU2 259 aa10.28□□□□□ -0.76
SHOX2-206ENST00000554685 TRAV4A0A0B4J268 109 aa10.27□□□□□ -0.77
SHOX2-206ENST00000554685 GAGE12BA1L429 117 aa10.27□□□□□ -0.77
SHOX2-206ENST00000554685 RS1O15537 224 aa10.27□□□□□ -0.77
SHOX2-206ENST00000554685 GAGE7O76087 117 aa10.27□□□□□ -0.77
SHOX2-206ENST00000554685 GAGE12FP0CL80 117 aa10.27□□□□□ -0.77
SHOX2-206ENST00000554685 GAGE12GP0CL81 117 aa10.27□□□□□ -0.77
SHOX2-206ENST00000554685 GAGE12IP0CL82 117 aa10.27□□□□□ -0.77
SHOX2-206ENST00000554685 LINC00612Q8N6U2 182 aa10.27□□□□□ -0.77
SHOX2-206ENST00000554685 OR4C5Q8NGB2 326 aa10.27□□□□□ -0.77
SHOX2-206ENST00000554685 C18orf15Q96N68 181 aa10.27□□□□□ -0.77
SHOX2-206ENST00000554685 DEFB4AO15263 64 aa10.26□□□□□ -0.77
SHOX2-206ENST00000554685 MGPP08493 103 aa10.26□□□□□ -0.77
SHOX2-206ENST00000554685 FABP9Q0Z7S8 132 aa10.26□□□□□ -0.77
SHOX2-206ENST00000554685 FAM74A4Q5TZK3 123 aa10.26□□□□□ -0.77
SHOX2-206ENST00000554685 CFAP126Q5VTH2 177 aa10.26□□□□□ -0.77
SHOX2-206ENST00000554685 ZFP2Q6ZN57 461 aa10.26□□□□□ -0.77
SHOX2-206ENST00000554685 AMN1Q8IY45 258 aa10.26□□□□□ -0.77
SHOX2-206ENST00000554685 MRAP2Q96G30 205 aa10.26□□□□□ -0.77
SHOX2-206ENST00000554685 A0A087WWL8 130 aa10.25□□□□□ -0.77
SHOX2-206ENST00000554685 PPBPP02775 128 aa10.25□□□□□ -0.77
SHOX2-206ENST00000554685 CRYGDP07320 174 aa10.25□□□□□ -0.77
SHOX2-206ENST00000554685 DAD1P61803 113 aa10.25□□□□□ -0.77
SHOX2-206ENST00000554685 JPT2Q9H910 190 aa10.25□□□□□ -0.77
SHOX2-206ENST00000554685 KIF25-AS1Q9Y6Z4 181 aa10.25□□□□□ -0.77
SHOX2-206ENST00000554685 DEFB130BP0DP73 79 aa10.24□□□□□ -0.77
SHOX2-206ENST00000554685 DEFB130AP0DP74 79 aa10.24□□□□□ -0.77
SHOX2-206ENST00000554685 RAB4AP20338 218 aa10.24□□□□□ -0.77
SHOX2-206ENST00000554685 SLAQ13239 276 aa10.24□□□□□ -0.77
SHOX2-206ENST00000554685 ZNF56Q15929 161 aa10.24□□□□□ -0.77
SHOX2-206ENST00000554685 POM121L12Q8N7R1 296 aa10.24□□□□□ -0.77
SHOX2-206ENST00000554685 MUC4Q99102 2169 aa10.24□□□□□ -0.77
SHOX2-206ENST00000554685 C1orf196B1AJZ1 125 aa10.23□□□□□ -0.77
SHOX2-206ENST00000554685 F5H697 171 aa10.23□□□□□ -0.77
SHOX2-206ENST00000554685 H7C1H1 209 aa10.23□□□□□ -0.77
SHOX2-206ENST00000554685 PPP1R17O96001 155 aa10.23□□□□□ -0.77
SHOX2-206ENST00000554685 TRGC2P03986 189 aa10.23□□□□□ -0.77
SHOX2-206ENST00000554685 MRPL51Q4U2R6 128 aaKnown RBP10.23□□□□□ -0.77
SHOX2-206ENST00000554685 RNF185Q96GF1 192 aa10.23□□□□□ -0.77
SHOX2-206ENST00000554685 SAMD10Q9BYL1 202 aa10.23□□□□□ -0.77
SHOX2-206ENST00000554685 A0A0J9YWU9 116 aa10.22□□□□□ -0.77
SHOX2-206ENST00000554685 CKS2P33552 79 aa10.22□□□□□ -0.77
SHOX2-206ENST00000554685 UFSP1Q6NVU6 142 aa10.22□□□□□ -0.77
SHOX2-206ENST00000554685 ORMDL3Q8N138 153 aa10.22□□□□□ -0.77
SHOX2-206ENST00000554685 CELA1Q9UNI1 258 aa10.22□□□□□ -0.77
SHOX2-206ENST00000554685 LAMTOR2Q9Y2Q5 125 aa10.22□□□□□ -0.77
SHOX2-206ENST00000554685 TRGV4A0A0C4DH28 118 aa10.21□□□□□ -0.77
SHOX2-206ENST00000554685 ATP5G1P05496 136 aa10.21□□□□□ -0.77
SHOX2-206ENST00000554685 LINC00315P59091 139 aa10.21□□□□□ -0.77
SHOX2-206ENST00000554685 ZNF479Q96JC4 524 aa10.21□□□□□ -0.77
SHOX2-206ENST00000554685 EDA2RQ9HAV5 297 aa10.21□□□□□ -0.77
SHOX2-206ENST00000554685 D6R8Y8 96 aa10.2□□□□□ -0.78
SHOX2-206ENST00000554685 PHOX2AO14813 284 aa10.2□□□□□ -0.78
SHOX2-206ENST00000554685 IGHV3-53P01767 116 aa10.2□□□□□ -0.78
SHOX2-206ENST00000554685 KIAA1644Q3SXP7 199 aa10.2□□□□□ -0.78
SHOX2-206ENST00000554685 SUMO4Q6EEV6 95 aa10.2□□□□□ -0.78
SHOX2-206ENST00000554685 PRELID3AQ96N28 172 aa10.2□□□□□ -0.78
SHOX2-206ENST00000554685 U3KQK5 164 aa10.2□□□□□ -0.78
SHOX2-206ENST00000554685 IGHV3-73A0A0B4J1V6 119 aa10.19□□□□□ -0.78
SHOX2-206ENST00000554685 RAB5BP61020 215 aa10.19□□□□□ -0.78
SHOX2-206ENST00000554685 C11orf45Q8TAV5 145 aa10.19□□□□□ -0.78
SHOX2-206ENST00000554685 NBEAL2Q6ZNJ1 2754 aa10.19□□□□□ -0.78
SHOX2-206ENST00000554685 TRBV6-4A0A1B0GX49 114 aa10.18□□□□□ -0.78
SHOX2-206ENST00000554685 SRIP30626 198 aa10.18□□□□□ -0.78
SHOX2-206ENST00000554685 ALKBH7Q9BT30 221 aaPredicted RBP10.18□□□□□ -0.78
SHOX2-206ENST00000554685 TRAV26-2A0A0B4J265 109 aa10.17□□□□□ -0.78
SHOX2-206ENST00000554685 TRBV10-1A0A0K0K1A3 114 aa10.17□□□□□ -0.78
SHOX2-206ENST00000554685 K7EQD1 137 aa10.17□□□□□ -0.78
SHOX2-206ENST00000554685 M0QY20 66 aa10.17□□□□□ -0.78
SHOX2-206ENST00000554685 NCR2O95944 276 aa10.17□□□□□ -0.78
SHOX2-206ENST00000554685 GATA1P15976 413 aaPredicted RBP10.17□□□□□ -0.78
SHOX2-206ENST00000554685 FHL2Q14192 279 aa10.17□□□□□ -0.78
SHOX2-206ENST00000554685 RHOHQ15669 191 aa10.17□□□□□ -0.78
SHOX2-206ENST00000554685 C12orf74Q32Q52 190 aa10.17□□□□□ -0.78
SHOX2-206ENST00000554685 OR10J3Q5JRS4 329 aa10.17□□□□□ -0.78
SHOX2-206ENST00000554685 PRADC1Q9BSG0 188 aa10.17□□□□□ -0.78
SHOX2-206ENST00000554685 SMKR1H3BMG3 65 aa10.16□□□□□ -0.78
SHOX2-206ENST00000554685 TNFRSF6BO95407 300 aa10.16□□□□□ -0.78
SHOX2-206ENST00000554685 DNAJC30Q96LL9 226 aa10.16□□□□□ -0.78
SHOX2-206ENST00000554685 C20orf78Q9BR46 151 aa10.16□□□□□ -0.78
SHOX2-206ENST00000554685 MAP1LC3AQ9H492 121 aa10.16□□□□□ -0.78
SHOX2-206ENST00000554685 NIT2Q9NQR4 276 aa10.16□□□□□ -0.78
SHOX2-206ENST00000554685 PRO0255Q9UI72 69 aa10.16□□□□□ -0.78
SHOX2-206ENST00000554685 TRBV6-5A0A0K0K1A5 114 aa10.15□□□□□ -0.78
SHOX2-206ENST00000554685 NRACQ8N912 160 aa10.15□□□□□ -0.78
SHOX2-206ENST00000554685 ST20Q9HBF5 79 aa10.15□□□□□ -0.78
SHOX2-206ENST00000554685 HHLA3Q9XRX5 114 aa10.15□□□□□ -0.78
SHOX2-206ENST00000554685 F5H768 121 aa10.14□□□□□ -0.79
SHOX2-206ENST00000554685 NPYP01303 97 aa10.14□□□□□ -0.79
SHOX2-206ENST00000554685 RPL36AP83881 106 aaKnown RBP10.14□□□□□ -0.79
SHOX2-206ENST00000554685 SLC25A29Q8N8R3 303 aa10.14□□□□□ -0.79
SHOX2-206ENST00000554685 RPL36ALQ969Q0 106 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms