RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TRGV1A0A0A0MS02 117 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 TRAV4A0A0B4J268 109 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 IGHV4-28A0A0C4DH34 117 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST1H2BKO60814 126 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 PRB2P02812 416 aaPredicted RBP5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST1H2BJP06899 126 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 CRYGDP07320 174 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST1H2BOP23527 126 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST1H2BBP33778 126 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST1H2BDP58876 126 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 LINC00315P59091 139 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST1H2BCP62807 126 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST2H2BEQ16778 126 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.48□□□□□ -1.53
TDP1-209ENST00000554180 CFAP126Q5VTH2 177 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 UFSP1Q6NVU6 142 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 ORMDL3Q8N138 153 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 C14orf178Q8N769 122 aaPredicted RBP5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST1H2BHQ93079 126 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST1H2BNQ99877 126 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 HIST1H2BMQ99879 126 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 TM2D3Q9BRN9 247 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 C11orf68Q9H3H3 251 aaKnown RBP5.48□□□□□ -1.53
TDP1-209ENST00000554180 EDA2RQ9HAV5 297 aa5.48□□□□□ -1.53
TDP1-209ENST00000554180 MRPL16Q9NX20 251 aaKnown RBP5.48□□□□□ -1.53
TDP1-209ENST00000554180 D6R8Y8 96 aa5.47□□□□□ -1.53
TDP1-209ENST00000554180 RS1O15537 224 aa5.47□□□□□ -1.53
TDP1-209ENST00000554180 PPP1R17O96001 155 aa5.47□□□□□ -1.53
TDP1-209ENST00000554180 CKS2P33552 79 aa5.47□□□□□ -1.53
TDP1-209ENST00000554180 MRPL51Q4U2R6 128 aaKnown RBP5.47□□□□□ -1.53
TDP1-209ENST00000554180 DEFB121Q5J5C9 76 aa5.47□□□□□ -1.53
TDP1-209ENST00000554180 OR10J3Q5JRS4 329 aa5.47□□□□□ -1.53
TDP1-209ENST00000554180 Q6ZTI0 123 aa5.47□□□□□ -1.53
TDP1-209ENST00000554180 SBSPONQ8IVN8 264 aa5.47□□□□□ -1.53
TDP1-209ENST00000554180 ALKBH7Q9BT30 221 aaPredicted RBP5.47□□□□□ -1.53
TDP1-209ENST00000554180 JPT2Q9H910 190 aa5.47□□□□□ -1.53
TDP1-209ENST00000554180 TRGV2A0A075B6R0 118 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 A0A087WWL8 130 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 H7C1H1 209 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 MGPP08493 103 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 SRIP30626 198 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 EMP1P54849 157 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 Q0VG73 95 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 KIAA1644Q3SXP7 199 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 FAM74A4Q5TZK3 123 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 OR4C5Q8NGB2 326 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 MRAPQ8TCY5 172 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 PRELID3AQ96N28 172 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 B9D2Q9BPU9 175 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 SAMD10Q9BYL1 202 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 DKK2Q9UBU2 259 aa5.46□□□□□ -1.54
TDP1-209ENST00000554180 GAGE12BA1L429 117 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 F5H697 171 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 GAGE7O76087 117 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 IGHV3-53P01767 116 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 GAGE12FP0CL80 117 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 GAGE12GP0CL81 117 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 GAGE12IP0CL82 117 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 SPART-AS1P0CW21 52 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 ZNF56Q15929 161 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 COA6Q5JTJ3 125 aaKnown RBP5.45□□□□□ -1.54
TDP1-209ENST00000554180 FAM222AQ5U5X8 452 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 SUMO4Q6EEV6 95 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 C18orf32Q8TCD1 76 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 ZMAT4Q9H898 229 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 RETNQ9HD89 108 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 TENM3Q9P273 2699 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 STAB2Q8WWQ8 2551 aa5.45□□□□□ -1.54
TDP1-209ENST00000554180 MEGF8Q7Z7M0 2845 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 TRAV26-2A0A0B4J265 109 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 PRSS47A8MTI9 375 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 M0QY20 66 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 TNFRSF6BO95407 300 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 NCR2O95944 276 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 NPYP01303 97 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 S100A6P06703 90 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 RPL32P62910 135 aaKnown RBP5.44□□□□□ -1.54
TDP1-209ENST00000554180 NRACQ8N912 160 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 ZNF479Q96JC4 524 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 C20orf78Q9BR46 151 aa5.44□□□□□ -1.54
TDP1-209ENST00000554180 TMA7Q9Y2S6 64 aaKnown RBP5.44□□□□□ -1.54
TDP1-209ENST00000554180 TRBV10-1A0A0K0K1A3 114 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 TRBV6-5A0A0K0K1A5 114 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 TRBV6-4A0A1B0GX49 114 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 SMKR1H3BMG3 65 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 DEFB4AO15263 64 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 DEFB130BP0DP73 79 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 DEFB130AP0DP74 79 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 GATA1P15976 413 aaPredicted RBP5.43□□□□□ -1.54
TDP1-209ENST00000554180 DAD1P61803 113 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 SUMO2P61956 95 aaKnown RBP5.43□□□□□ -1.54
TDP1-209ENST00000554180 BAGE3Q86Y29 109 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 MAP1LC3AQ9H492 121 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 NXT2Q9NPJ8 142 aaKnown RBP5.43□□□□□ -1.54
TDP1-209ENST00000554180 NIT2Q9NQR4 276 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 CELA1Q9UNI1 258 aa5.43□□□□□ -1.54
TDP1-209ENST00000554180 IGHV3-73A0A0B4J1V6 119 aa5.42□□□□□ -1.54
TDP1-209ENST00000554180 K7EMI3 77 aa5.42□□□□□ -1.54
TDP1-209ENST00000554180 K7EQD1 137 aa5.42□□□□□ -1.54
TDP1-209ENST00000554180 GAS8-AS1O95177 125 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms