RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 PCP2Q8IVA1 136 aa6.81□□□□□ -1.32
PRKCH-209ENST00000553889 Q8N1Y9 231 aa6.81□□□□□ -1.32
PRKCH-209ENST00000553889 TM2D2Q9BX73 214 aa6.81□□□□□ -1.32
PRKCH-209ENST00000553889 CSTL1Q9H114 145 aa6.81□□□□□ -1.32
PRKCH-209ENST00000553889 CYSLTR1Q9Y271 337 aa6.81□□□□□ -1.32
PRKCH-209ENST00000553889 IGKV2D-26A0A0A0MRZ7 120 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 CCL25O15444 150 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 MGPP08493 103 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 CRYBA4P53673 196 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 DEFB114Q30KQ6 69 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 NSUN5P1Q3KNT7 163 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 ZFP2Q6ZN57 461 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 TRPT1Q86TN4 253 aaKnown RBP6.8□□□□□ -1.32
PRKCH-209ENST00000553889 BAALCQ8WXS3 180 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 KIR2DL4Q99706 377 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 SPXQ9BT56 116 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 TMEM160Q9NX00 188 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 MDFICQ9P1T7 246 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 TP73-AS1Q9UF72 201 aa6.8□□□□□ -1.32
PRKCH-209ENST00000553889 CHTOPQ9Y3Y2 248 aaKnown RBP6.8□□□□□ -1.32
PRKCH-209ENST00000553889 TRBV25-1A0A075B6N4 114 aa6.79□□□□□ -1.32
PRKCH-209ENST00000553889 SDHAF1A6NFY7 115 aa6.79□□□□□ -1.32
PRKCH-209ENST00000553889 E9PLD3 99 aa6.79□□□□□ -1.32
PRKCH-209ENST00000553889 K7EP13 123 aa6.79□□□□□ -1.32
PRKCH-209ENST00000553889 KRTAP1-1Q07627 177 aa6.79□□□□□ -1.32
PRKCH-209ENST00000553889 BEAN1Q3B7T3 259 aa6.79□□□□□ -1.32
PRKCH-209ENST00000553889 UFSP1Q6NVU6 142 aa6.79□□□□□ -1.32
PRKCH-209ENST00000553889 OR11H1Q8NG94 326 aa6.79□□□□□ -1.32
PRKCH-209ENST00000553889 FAM110AQ9BQ89 295 aa6.79□□□□□ -1.32
PRKCH-209ENST00000553889 ZANQ9Y493 2812 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 C9orf118A6NHY6 69 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 PRSS29PA6NIE9 313 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 A8MWV9 139 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 NMUP48645 174 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 PTTG1IPP53801 180 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 SLURP1P55000 103 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 CMC4P56277 68 aaPredicted RBP6.78□□□□□ -1.32
PRKCH-209ENST00000553889 SCGB2A2Q13296 93 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 SPINK13Q1W4C9 94 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 MORN3Q6PF18 240 aaPredicted RBP6.78□□□□□ -1.32
PRKCH-209ENST00000553889 TMEM61Q8N0U2 210 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 DLX4Q92988 240 aaPredicted RBP6.78□□□□□ -1.32
PRKCH-209ENST00000553889 JPT2Q9H910 190 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 CELSR2Q9HCU4 2923 aa6.78□□□□□ -1.32
PRKCH-209ENST00000553889 SORL1Q92673 2214 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 CSMD1Q96PZ7 3565 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 CENPEQ02224 2701 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 DNAJC9-AS1A6NH13 148 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 M0R2P5 195 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 TSHBP01222 138 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 RNASE1P07998 156 aaKnown RBP6.77□□□□□ -1.33
PRKCH-209ENST00000553889 DEFB131AP59861 70 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 PMVKQ15126 192 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 ZNF876PQ49A33 203 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 C18orf65Q6ZTR6 163 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 GTSCR1Q86UQ5 136 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 WFDC11Q8NEX6 87 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 DUX5Q96PT3 197 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 MAP6D1Q9H9H5 199 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 PYGO1Q9Y3Y4 419 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 APCP25054 2843 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 MXRA5Q9NR99 2828 aa6.77□□□□□ -1.33
PRKCH-209ENST00000553889 TRAV12-2A0A075B6T6 113 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 A0A1B0GWB2 263 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 RBMY1BA6NDE4 496 aaKnown RBP6.76□□□□□ -1.33
PRKCH-209ENST00000553889 RBMY1EA6NEQ0 496 aaKnown RBP6.76□□□□□ -1.33
PRKCH-209ENST00000553889 OR11H12B2RN74 326 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 RHODO00212 210 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 SPRY2O43597 315 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 RBMY1DP0C7P1 496 aaKnown RBP6.76□□□□□ -1.33
PRKCH-209ENST00000553889 RBMY1A1P0DJD3 496 aaKnown RBP6.76□□□□□ -1.33
PRKCH-209ENST00000553889 RBMY1CP0DJD4 496 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 ZNF415Q09FC8 603 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 RBMY1FQ15415 496 aaKnown RBP6.76□□□□□ -1.33
PRKCH-209ENST00000553889 NFE4Q86UQ8 179 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 OR11H2Q8NH07 326 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 CHAC1Q9BUX1 264 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 CST9LQ9H4G1 147 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 AGRNO00468 2067 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 ITPR3Q14573 2671 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 TEX15Q9BXT5 2789 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 SVEP1Q4LDE5 3571 aa6.76□□□□□ -1.33
PRKCH-209ENST00000553889 IGLV4-69A0A075B6H9 119 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 A0A087WWL8 130 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 C11orf86A6NJI1 115 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 F5H697 171 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 I3L3M4 83 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 NDUFA7O95182 113 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 DEFB136Q30KP8 78 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 C20orf203Q8NBC4 194 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 C11orf72Q8NBR9 251 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 KLHL30-AS1Q8NEE0 82 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 DYNLRB2Q8TF09 96 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 PHLDA1Q8WV24 401 aaPredicted RBP6.75□□□□□ -1.33
PRKCH-209ENST00000553889 RAX2Q96IS3 184 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 DNAJC30Q96LL9 226 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 TP53TG1Q9Y2A0 90 aa6.75□□□□□ -1.33
PRKCH-209ENST00000553889 MAP1AP78559 2803 aaPredicted RBP6.75□□□□□ -1.33
PRKCH-209ENST00000553889 TRBV7-3A0A075B6L6 115 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 TRAV8-6A0A0B4J262 113 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms