RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TM2D2Q9BX73 214 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 TRBV7-9A0A0J9YWB2 115 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 K7EMT4 169 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 K7ERU9 68 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 SUMO4Q6EEV6 95 aa10.88□□□□□ -0.67
ACTN1-211ENST00000553882 PHLDA1Q8WV24 401 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-211ENST00000553882 SYNJ2BPP57105 145 aa10.87□□□□□ -0.67
ACTN1-211ENST00000553882 RPL39P62891 51 aaKnown RBP10.87□□□□□ -0.67
ACTN1-211ENST00000553882 MDFICQ9P1T7 246 aa10.87□□□□□ -0.67
ACTN1-211ENST00000553882 TP53TG1Q9Y2A0 90 aa10.87□□□□□ -0.67
ACTN1-211ENST00000553882 NAV2Q8IVL1 2488 aa10.86□□□□□ -0.67
ACTN1-211ENST00000553882 NXPH4O95158 308 aa10.86□□□□□ -0.67
ACTN1-211ENST00000553882 TGFAP01135 160 aa10.86□□□□□ -0.67
ACTN1-211ENST00000553882 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
ACTN1-211ENST00000553882 PRADC1Q9BSG0 188 aa10.86□□□□□ -0.67
ACTN1-211ENST00000553882 CYSLTR1Q9Y271 337 aa10.86□□□□□ -0.67
ACTN1-211ENST00000553882 MYMXA0A1B0GTQ4 84 aa10.85□□□□□ -0.67
ACTN1-211ENST00000553882 PPP1R17O96001 155 aa10.85□□□□□ -0.67
ACTN1-211ENST00000553882 OR5A1Q8NGJ0 315 aa10.85□□□□□ -0.67
ACTN1-211ENST00000553882 ZNF469Q96JG9 3925 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-211ENST00000553882 TSHBP01222 138 aa10.84□□□□□ -0.67
ACTN1-211ENST00000553882 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
ACTN1-211ENST00000553882 SCGB2A2Q13296 93 aa10.84□□□□□ -0.67
ACTN1-211ENST00000553882 CD300EQ496F6 205 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-211ENST00000553882 ZFP2Q6ZN57 461 aa10.84□□□□□ -0.67
ACTN1-211ENST00000553882 Q8N1Y9 231 aa10.84□□□□□ -0.67
ACTN1-211ENST00000553882 ZNF256Q9Y2P7 627 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-211ENST00000553882 SDHAF1A6NFY7 115 aa10.84□□□□□ -0.67
ACTN1-211ENST00000553882 CRYGDP07320 174 aa10.84□□□□□ -0.67
ACTN1-211ENST00000553882 IGHV4OR15-8A0A075B7B6 117 aa10.83□□□□□ -0.68
ACTN1-211ENST00000553882 A0A087WW49 117 aa10.83□□□□□ -0.68
ACTN1-211ENST00000553882 A0A0J9YX75 114 aa10.83□□□□□ -0.68
ACTN1-211ENST00000553882 C12orf74Q32Q52 190 aa10.83□□□□□ -0.68
ACTN1-211ENST00000553882 POM121L12Q8N7R1 296 aa10.83□□□□□ -0.68
ACTN1-211ENST00000553882 LINC01356Q8N9X3 169 aa10.83□□□□□ -0.68
ACTN1-211ENST00000553882 KLHL30-AS1Q8NEE0 82 aa10.83□□□□□ -0.68
ACTN1-211ENST00000553882 LGALS1P09382 135 aaKnown RBP10.83□□□□□ -0.68
ACTN1-211ENST00000553882 GATA3P23771 443 aa10.83□□□□□ -0.68
ACTN1-211ENST00000553882 POLR2KP53803 58 aaKnown RBP10.83□□□□□ -0.68
ACTN1-211ENST00000553882 ZNF56Q15929 161 aa10.83□□□□□ -0.68
ACTN1-211ENST00000553882 KIR2DL4Q99706 377 aa10.83□□□□□ -0.68
ACTN1-211ENST00000553882 TRBV7-3A0A075B6L6 115 aa10.82□□□□□ -0.68
ACTN1-211ENST00000553882 IGHV3-16A0A0C4DH30 117 aa10.82□□□□□ -0.68
ACTN1-211ENST00000553882 ZNF815PA8K554 130 aa10.82□□□□□ -0.68
ACTN1-211ENST00000553882 E9PLD3 99 aa10.82□□□□□ -0.68
ACTN1-211ENST00000553882 USP24Q9UPU5 2620 aa10.82□□□□□ -0.68
ACTN1-211ENST00000553882 C11orf86A6NJI1 115 aa10.82□□□□□ -0.68
ACTN1-211ENST00000553882 IGLL5B9A064 214 aa10.82□□□□□ -0.68
ACTN1-211ENST00000553882 HTN1P15515 57 aa10.82□□□□□ -0.68
ACTN1-211ENST00000553882 SCGB1D4Q6XE38 83 aa10.82□□□□□ -0.68
ACTN1-211ENST00000553882 ZNF479Q96JC4 524 aa10.82□□□□□ -0.68
ACTN1-211ENST00000553882 RIPPLY3P57055 190 aa10.81□□□□□ -0.68
ACTN1-211ENST00000553882 SONP18583 2426 aaKnown RBP10.81□□□□□ -0.68
ACTN1-211ENST00000553882 IGIPA6NJ69 53 aa10.81□□□□□ -0.68
ACTN1-211ENST00000553882 K7EQG2 157 aa10.81□□□□□ -0.68
ACTN1-211ENST00000553882 VCYO14598 125 aa10.81□□□□□ -0.68
ACTN1-211ENST00000553882 PRB1P04280 392 aa10.81□□□□□ -0.68
ACTN1-211ENST00000553882 TAL2Q16559 108 aa10.81□□□□□ -0.68
ACTN1-211ENST00000553882 SAMD13Q5VXD3 122 aa10.81□□□□□ -0.68
ACTN1-211ENST00000553882 PLEKHB2Q96CS7 222 aa10.81□□□□□ -0.68
ACTN1-211ENST00000553882 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
ACTN1-211ENST00000553882 HOXD3P31249 432 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-211ENST00000553882 RPL24P83731 157 aaKnown RBP10.8□□□□□ -0.68
ACTN1-211ENST00000553882 DEFB136Q30KP8 78 aa10.8□□□□□ -0.68
ACTN1-211ENST00000553882 AMTNQ6UX39 209 aa10.8□□□□□ -0.68
ACTN1-211ENST00000553882 EPG5Q9HCE0 2579 aa10.8□□□□□ -0.68
ACTN1-211ENST00000553882 MTURNQ8N3F0 131 aa10.8□□□□□ -0.68
ACTN1-211ENST00000553882 C9orf85Q96MD7 179 aa10.8□□□□□ -0.68
ACTN1-211ENST00000553882 ZNF580Q9UK33 172 aa10.8□□□□□ -0.68
ACTN1-211ENST00000553882 NF1P21359 2839 aa10.8□□□□□ -0.68
ACTN1-211ENST00000553882 DSCR9P59020 149 aa10.79□□□□□ -0.68
ACTN1-211ENST00000553882 BEX4Q9NWD9 120 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-211ENST00000553882 H3BMG7 143 aa10.79□□□□□ -0.68
ACTN1-211ENST00000553882 PMVKQ15126 192 aa10.79□□□□□ -0.68
ACTN1-211ENST00000553882 OPRPNQ99935 248 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-211ENST00000553882 IGHV1OR15-1A0A075B7D0 117 aa10.78□□□□□ -0.68
ACTN1-211ENST00000553882 A0A096LNT2 108 aa10.78□□□□□ -0.68
ACTN1-211ENST00000553882 ZNF876PQ49A33 203 aa10.78□□□□□ -0.68
ACTN1-211ENST00000553882 TMEM170BQ5T4T1 132 aa10.78□□□□□ -0.68
ACTN1-211ENST00000553882 MORN3Q6PF18 240 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-211ENST00000553882 VPREB3Q9UKI3 123 aa10.78□□□□□ -0.68
ACTN1-211ENST00000553882 G3V4G9 280 aa10.78□□□□□ -0.68
ACTN1-211ENST00000553882 LGALS9O00182 355 aa10.78□□□□□ -0.68
ACTN1-211ENST00000553882 C18orf65Q6ZTR6 163 aa10.78□□□□□ -0.68
ACTN1-211ENST00000553882 SETD2Q9BYW2 2564 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-211ENST00000553882 CHD6Q8TD26 2715 aa10.78□□□□□ -0.68
ACTN1-211ENST00000553882 TRBV27A0A0K0K1C4 114 aa10.77□□□□□ -0.68
ACTN1-211ENST00000553882 M0QY20 66 aa10.77□□□□□ -0.68
ACTN1-211ENST00000553882 PRM2P04554 102 aa10.77□□□□□ -0.68
ACTN1-211ENST00000553882 COX6B1P14854 86 aa10.77□□□□□ -0.68
ACTN1-211ENST00000553882 SRSF9Q13242 221 aaKnown RBP eCLIP10.77□□□□□ -0.68
ACTN1-211ENST00000553882 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.68
ACTN1-211ENST00000553882 FOXI2Q6ZQN5 318 aa10.77□□□□□ -0.68
ACTN1-211ENST00000553882 SYT8Q8NBV8 401 aa10.77□□□□□ -0.68
ACTN1-211ENST00000553882 TEX48A0A1B0GUV7 120 aa10.77□□□□□ -0.69
ACTN1-211ENST00000553882 HOXA3O43365 443 aaPredicted RBP10.77□□□□□ -0.69
ACTN1-211ENST00000553882 RPL32P62910 135 aaKnown RBP10.77□□□□□ -0.69
ACTN1-211ENST00000553882 KNCNA6PVL3 124 aa10.76□□□□□ -0.69
ACTN1-211ENST00000553882 SFTA2Q6UW10 78 aa10.76□□□□□ -0.69
ACTN1-211ENST00000553882 ZNRF2Q8NHG8 242 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms