RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 SAPCD1Q5SSQ6 148 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 FAM74A4Q5TZK3 123 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 DPPA3Q6W0C5 159 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 OR2T35Q8NGX2 323 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 C9orf85Q96MD7 179 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 CTDSP1Q9GZU7 261 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 WFDC1Q9HC57 220 aa6.6□□□□□ -1.35
ACTN1-208ENST00000553370 IGKV2D-24A0A075B6R9 120 aa6.59□□□□□ -1.35
ACTN1-208ENST00000553370 H3BVH4 76 aa6.59□□□□□ -1.35
ACTN1-208ENST00000553370 FGF8P55075 233 aaPredicted RBP6.59□□□□□ -1.35
ACTN1-208ENST00000553370 ACTR3CQ9C0K3 210 aaPredicted RBP6.59□□□□□ -1.35
ACTN1-208ENST00000553370 PARLQ9H300 379 aa6.59□□□□□ -1.35
ACTN1-208ENST00000553370 C11orf21Q9P2W6 132 aa6.59□□□□□ -1.35
ACTN1-208ENST00000553370 A0A087WX48 190 aa6.58□□□□□ -1.36
ACTN1-208ENST00000553370 B4DEV8 164 aa6.58□□□□□ -1.36
ACTN1-208ENST00000553370 RHODO00212 210 aa6.58□□□□□ -1.36
ACTN1-208ENST00000553370 STAG3L2P0CL84 134 aa6.58□□□□□ -1.36
ACTN1-208ENST00000553370 STAG3L3P0CL85 134 aa6.58□□□□□ -1.36
ACTN1-208ENST00000553370 ZFP2Q6ZN57 461 aa6.58□□□□□ -1.36
ACTN1-208ENST00000553370 DAZ4Q86SG3 579 aaKnown RBP6.58□□□□□ -1.36
ACTN1-208ENST00000553370 OR11H4Q8NGC9 324 aa6.58□□□□□ -1.36
ACTN1-208ENST00000553370 DEFB104AQ8WTQ1 72 aa6.58□□□□□ -1.36
ACTN1-208ENST00000553370 BAALCQ8WXS3 180 aa6.58□□□□□ -1.36
ACTN1-208ENST00000553370 DAZ3Q9NR90 486 aaKnown RBP6.58□□□□□ -1.36
ACTN1-208ENST00000553370 EPDR1Q9UM22 224 aa6.58□□□□□ -1.36
ACTN1-208ENST00000553370 TRAV34A0A0B4J273 112 aa6.57□□□□□ -1.36
ACTN1-208ENST00000553370 M0R036 132 aa6.57□□□□□ -1.36
ACTN1-208ENST00000553370 RNASE3P12724 160 aaKnown RBP6.57□□□□□ -1.36
ACTN1-208ENST00000553370 UBE2G2P60604 165 aa6.57□□□□□ -1.36
ACTN1-208ENST00000553370 WFDC2Q14508 124 aa6.57□□□□□ -1.36
ACTN1-208ENST00000553370 OR2G3Q8NGZ4 309 aa6.57□□□□□ -1.36
ACTN1-208ENST00000553370 PTH2Q96A98 100 aa6.57□□□□□ -1.36
ACTN1-208ENST00000553370 PSMG3Q9BT73 122 aaPredicted RBP6.57□□□□□ -1.36
ACTN1-208ENST00000553370 PHLDA3Q9Y5J5 127 aa6.57□□□□□ -1.36
ACTN1-208ENST00000553370 ARL2-SNX15V9GYD0 113 aa6.57□□□□□ -1.36
ACTN1-208ENST00000553370 BORCS7-ASMTA0A0B4J1R7 106 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 A0A1B0GVG6 124 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 FABP5P3A8MUU1 101 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 CRPP02741 224 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 TPT1P13693 172 aaKnown RBP6.56□□□□□ -1.36
ACTN1-208ENST00000553370 ATP6V0CP27449 155 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 UBE2G1P62253 170 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 SERF2P84101 59 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 ELOBQ15370 118 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 LINC01620Q4KN68 170 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 Q86TA4 180 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 C14orf178Q8N769 122 aaPredicted RBP6.56□□□□□ -1.36
ACTN1-208ENST00000553370 Q8N976 141 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.56□□□□□ -1.36
ACTN1-208ENST00000553370 INO80EQ8NBZ0 244 aaPredicted RBP6.56□□□□□ -1.36
ACTN1-208ENST00000553370 UBE2WQ96B02 151 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 KLK12Q9UKR0 248 aa6.56□□□□□ -1.36
ACTN1-208ENST00000553370 A0A1W2PRE2 83 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 TMEM262E9PQX1 116 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 M0R381 172 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 PEX7O00628 323 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 NPSP0C0P6 89 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 C14orf177Q52M58 125 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 SAMD10Q9BYL1 202 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 MED28Q9H204 178 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 JPT2Q9H910 190 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 IL36BQ9NZH7 164 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 ALG5Q9Y673 324 aa6.55□□□□□ -1.36
ACTN1-208ENST00000553370 TMSB15BA0A087X1C1 80 aa6.54□□□□□ -1.36
ACTN1-208ENST00000553370 GRIFINA4D1Z8 144 aa6.54□□□□□ -1.36
ACTN1-208ENST00000553370 IGLV2-11P01706 119 aa6.54□□□□□ -1.36
ACTN1-208ENST00000553370 RPL36AP83881 106 aaKnown RBP6.54□□□□□ -1.36
ACTN1-208ENST00000553370 PIK3CD-AS1Q5SR53 167 aa6.54□□□□□ -1.36
ACTN1-208ENST00000553370 AKR1C8PQ5T2L2 129 aa6.54□□□□□ -1.36
ACTN1-208ENST00000553370 FAM162BQ5T6X4 162 aa6.54□□□□□ -1.36
ACTN1-208ENST00000553370 SCXQ7RTU7 201 aa6.54□□□□□ -1.36
ACTN1-208ENST00000553370 RPL36ALQ969Q0 106 aaKnown RBP6.54□□□□□ -1.36
ACTN1-208ENST00000553370 LINC00479Q96M42 142 aa6.54□□□□□ -1.36
ACTN1-208ENST00000553370 TNFSF18Q9UNG2 199 aa6.54□□□□□ -1.36
ACTN1-208ENST00000553370 FXYD6-FXYD2A0A087WZ82 144 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 IGKV3D-20A0A0C4DH25 116 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 CTXND1A0A1B0GTU2 59 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 SH2D1AO60880 128 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 ARMS2P0C7Q2 107 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 LINC00694P0DN24 101 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 Q0VG73 95 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 ZNF56Q15929 161 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 Q6ZSA8 131 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 NIT1Q86X76 327 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 ZFP82Q8N141 532 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 STOML3Q8TAV4 291 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 AQP10Q96PS8 301 aa6.53□□□□□ -1.36
ACTN1-208ENST00000553370 NKX6-2Q9C056 277 aaPredicted RBP6.53□□□□□ -1.36
ACTN1-208ENST00000553370 HLA-DQA1P01909 254 aa6.52□□□□□ -1.37
ACTN1-208ENST00000553370 C15orf54Q8N8G6 183 aa6.52□□□□□ -1.37
ACTN1-208ENST00000553370 SUN5Q8TC36 379 aa6.52□□□□□ -1.37
ACTN1-208ENST00000553370 HIST1H2BAQ96A08 127 aa6.52□□□□□ -1.37
ACTN1-208ENST00000553370 ZC2HC1AQ96GY0 325 aa6.52□□□□□ -1.37
ACTN1-208ENST00000553370 FMC1Q96HJ9 113 aa6.52□□□□□ -1.37
ACTN1-208ENST00000553370 CHCHD7Q9BUK0 85 aa6.52□□□□□ -1.37
ACTN1-208ENST00000553370 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
ACTN1-208ENST00000553370 KRTAP29-1A8MX34 341 aaPredicted RBP6.51□□□□□ -1.37
ACTN1-208ENST00000553370 KRBOX1C9JBD0 128 aa6.51□□□□□ -1.37
ACTN1-208ENST00000553370 PFDN1O60925 122 aa6.51□□□□□ -1.37
ACTN1-208ENST00000553370 IGLV2-8P01709 118 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms