RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 GRIFINA4D1Z8 144 aa4.09□□□□□ -1.75
CCDC65-204ENST00000552188 KRBOX1C9JBD0 128 aa4.09□□□□□ -1.75
CCDC65-204ENST00000552188 H3BVH4 76 aa4.09□□□□□ -1.75
CCDC65-204ENST00000552188 SIVA1O15304 175 aa4.09□□□□□ -1.75
CCDC65-204ENST00000552188 RS1O15537 224 aa4.09□□□□□ -1.75
CCDC65-204ENST00000552188 LTAP01374 205 aa4.09□□□□□ -1.75
CCDC65-204ENST00000552188 ARMS2P0C7Q2 107 aa4.09□□□□□ -1.75
CCDC65-204ENST00000552188 MGST1P10620 155 aaKnown RBP4.09□□□□□ -1.75
CCDC65-204ENST00000552188 BLOC1S1P78537 153 aa4.09□□□□□ -1.75
CCDC65-204ENST00000552188 ZNF506Q5JVG8 444 aa4.09□□□□□ -1.75
CCDC65-204ENST00000552188 SH2D6Q7Z4S9 175 aa4.09□□□□□ -1.75
CCDC65-204ENST00000552188 TRAV1-1A0A0B4J248 108 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 USP17L23D6RBM5 183 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 K7EQD1 137 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 M0R381 172 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 PDE6DO43924 150 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 RNASE3P12724 160 aaKnown RBP4.08□□□□□ -1.76
CCDC65-204ENST00000552188 RPL35P42766 123 aaKnown RBP4.08□□□□□ -1.76
CCDC65-204ENST00000552188 GNG4P50150 75 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 SSTP61278 116 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 CCL20P78556 96 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 MEF2BQ02080 365 aaPredicted RBP4.08□□□□□ -1.76
CCDC65-204ENST00000552188 RHOHQ15669 191 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 FAM74A4Q5TZK3 123 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 CFAP126Q5VTH2 177 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 LYPD5Q6UWN5 251 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 Q6ZR54 194 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 C6orf223Q8N319 242 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 C9orf62Q8N4C0 152 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 PTH2Q96A98 100 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 C9orf85Q96MD7 179 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 UPK3BQ9BT76 320 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 DNAH6Q9C0G6 4158 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 BIN3Q9NQY0 253 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 MED9Q9NWA0 146 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 IL36BQ9NZH7 164 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 VAX2Q9UIW0 290 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 KMT2AQ03164 3969 aa4.08□□□□□ -1.76
CCDC65-204ENST00000552188 TRAV8-6A0A0B4J262 113 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 LOC100131303A0A0U1RQF7 123 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 TRBV6-4A0A1B0GX49 114 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 A0A1W2PPQ1 181 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 RHODO00212 210 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 NXPH4O95158 308 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 SMIM17P0DL12 118 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 BCL2P10415 239 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 GATA1P15976 413 aaPredicted RBP4.07□□□□□ -1.76
CCDC65-204ENST00000552188 EVI2AP22794 236 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 CRIP1P50238 77 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 OR10J3Q5JRS4 329 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 PIK3CD-AS1Q5SR53 167 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 SERTAD4-AS1Q5TG53 156 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 SPANXN1Q5VSR9 72 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 ALKAL2Q6UX46 152 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 ZFP2Q6ZN57 461 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 COX8CQ7Z4L0 72 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 ZFP82Q8N141 532 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 SLC25A29Q8N8R3 303 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 FAM30AQ9NZY2 134 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 LY96Q9Y6Y9 160 aa4.07□□□□□ -1.76
CCDC65-204ENST00000552188 RAB19A4D1S5 217 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 GAGE12JA6NER3 117 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 RTL8CO15255 209 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 NKX2-5P52952 324 aaPredicted RBP4.06□□□□□ -1.76
CCDC65-204ENST00000552188 CEBPGP53567 150 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 RPS20P60866 119 aaKnown RBP4.06□□□□□ -1.76
CCDC65-204ENST00000552188 RPL19P84098 196 aaKnown RBP4.06□□□□□ -1.76
CCDC65-204ENST00000552188 GAGE1Q13065 139 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 GAGE4Q13068 117 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 GAGE5Q13069 117 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 GAGE13Q4V321 117 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 CENPWQ5EE01 88 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 DNLZQ5SXM8 178 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.06□□□□□ -1.76
CCDC65-204ENST00000552188 ATP6V0E2Q8NHE4 81 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 C11orf52Q96A22 123 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 DERL1Q9BUN8 251 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 EIF5A2Q9GZV4 153 aaKnown RBP4.06□□□□□ -1.76
CCDC65-204ENST00000552188 PARLQ9H300 379 aa4.06□□□□□ -1.76
CCDC65-204ENST00000552188 A0A1B0GVG6 124 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 RBFOX3A6NFN3 312 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 F5H697 171 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 P01737 135 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 CXCL1P09341 107 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 ZNF56Q15929 161 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 LBHQ53QV2 105 aaPredicted RBP4.05□□□□□ -1.76
CCDC65-204ENST00000552188 NFE4Q86UQ8 179 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 OR2D3Q8NGH3 330 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 SMIM12Q96EX1 92 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 SFRP2Q96HF1 295 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 MLST8Q9BVC4 326 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 JPT2Q9H910 190 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 DNAH10Q8IVF4 4471 aa4.05□□□□□ -1.76
CCDC65-204ENST00000552188 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
CCDC65-204ENST00000552188 IGHV3-38A0A0C4DH36 116 aa4.04□□□□□ -1.76
CCDC65-204ENST00000552188 MUC21A0A0G2JKD1 596 aa4.04□□□□□ -1.76
CCDC65-204ENST00000552188 MUC21A0A140T8X8 626 aa4.04□□□□□ -1.76
CCDC65-204ENST00000552188 K7EP13 123 aa4.04□□□□□ -1.76
CCDC65-204ENST00000552188 CRYGDP07320 174 aa4.04□□□□□ -1.76
CCDC65-204ENST00000552188 RPL36AP83881 106 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms