RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 MDFIC2A0A1B0GVS7 189 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 A0A1W2PRE2 83 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM213A2RRL7 107 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM189A5PLL7 270 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 MAP1LC3B2A6NCE7 125 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 FAM24AA6NFZ4 105 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 OR2T8A6NH00 312 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 FABP5P3A8MUU1 101 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 ZNF727A8MUV8 499 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 OR11H12B2RN74 326 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 F2Z2F3 143 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 K7ERU9 68 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 M0R036 132 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 UBE2L6O14933 153 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 SIX6O95475 246 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 IGKV1-5P01602 117 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 IGKV1-16P04430 117 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 SLC25A5P05141 298 aaKnown RBP1.02□□□□□ -2.25
LIMA1-209ENST00000552008 GPX1P07203 203 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 NMBP08949 121 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 LGALS1P09382 135 aaKnown RBP1.02□□□□□ -2.25
LIMA1-209ENST00000552008 OR10J4P0C629 311 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 NBEAP1P0C6P0 100 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 LINC00614P0C842 121 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 GNG4P50150 75 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 H2BFSP57053 126 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 DAD1P61803 113 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 PKIAP61925 76 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 SUPT4H1P63272 117 aaKnown RBP1.02□□□□□ -2.25
LIMA1-209ENST00000552008 UBE2L3P68036 154 aaKnown RBP1.02□□□□□ -2.25
LIMA1-209ENST00000552008 CTAG1AP78358 180 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 RUNX1Q01196 453 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 DEFA5Q01523 94 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 MYO7AQ13402 2215 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 LAMA3Q16787 3333 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 DEFB121Q5J5C9 76 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 RPL7L1Q6DKI1 246 aaKnown RBP1.02□□□□□ -2.25
LIMA1-209ENST00000552008 RASL11AQ6T310 242 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM14EPQ6UXP3 125 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 LINC00305Q7Z4B0 112 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 COMMD7Q86VX2 200 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 KRTAP13-1Q8IUC0 172 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM75Q8N9X5 138 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 ZNF439Q8NDP4 499 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 WFDC11Q8NEX6 87 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 OR11H1Q8NG94 326 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 LINC00052Q96N35 136 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 AP1S3Q96PC3 154 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 C12orf57Q99622 126 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 RHPN1-AS1Q9BWJ2 59 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 SMIM3Q9BZL3 60 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 MAP1LC3BQ9GZQ8 125 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 SPANXB1Q9NS25 103 aaPredicted RBP1.02□□□□□ -2.25
LIMA1-209ENST00000552008 OR5AC2Q9NZP5 309 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM14CQ9P0S9 112 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 GNG13Q9P2W3 67 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 FUT9Q9Y231 359 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 LENEPQ9Y5L5 61 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 PUS1Q9Y606 427 aaKnown RBP eCLIP1.02□□□□□ -2.25
LIMA1-209ENST00000552008 LAMA2P24043 3122 aaKnown RBP1.02□□□□□ -2.25
LIMA1-209ENST00000552008 WDR87Q6ZQQ6 2873 aa1.02□□□□□ -2.25
LIMA1-209ENST00000552008 ZDBF2Q9HCK1 2354 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 NUMA1Q14980 2115 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 MYOFQ9NZM1 2061 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 SZT2Q5T011 3432 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 TRAV9-1A0A075B6T8 112 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 IGHV3-73A0A0B4J1V6 119 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 TRAV21A0A0B4J279 112 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 A0A0J9YX75 114 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 C20orf202A1L168 122 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 GRIFINA4D1Z8 144 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 RBAKDNA6NC62 111 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 SMIM9A6NGZ8 99 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 H7BYZ3 331 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 M0R143 59 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 APOC3P02656 99 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 MT-ND6P03923 174 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 REG1AP05451 166 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 TRGC1P0CF51 173 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 APELAP0DMC3 54 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 MGST1P10620 155 aaKnown RBP1.01□□□□□ -2.25
LIMA1-209ENST00000552008 SCGB1A1P11684 91 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 CXCL3P19876 107 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 CBLN1P23435 193 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 CD24P25063 80 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 CRYBB3P26998 211 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 PSMB8P28062 276 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 AKR1C3P42330 323 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 BLCAPP62952 87 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 HIST1H1AQ02539 215 aaPredicted RBP1.01□□□□□ -2.25
LIMA1-209ENST00000552008 ZNF90Q03938 601 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 WT1-ASQ06250 92 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 KLRD1Q13241 179 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 MRPL51Q4U2R6 128 aaKnown RBP1.01□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM97Q5BJF2 176 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 SPINK9Q5DT21 86 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 SPANXN1Q5VSR9 72 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 ALKAL2Q6UX46 152 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 GTF2H5Q6ZYL4 71 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 ATP5L2Q7Z4Y8 100 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms