RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 DAPP51397 102 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 RPL37AP61513 92 aaKnown RBP2.18□□□□□ -2.06
LIMA1-208ENST00000551691 IFITM2Q01629 132 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 MRPL51Q4U2R6 128 aaKnown RBP2.18□□□□□ -2.06
LIMA1-208ENST00000551691 GLT8D1Q68CQ7 371 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 RASL11AQ6T310 242 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 TCF24Q7RTU0 167 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 TMED4Q7Z7H5 227 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 EIF4E3Q8N5X7 224 aaKnown RBP2.18□□□□□ -2.06
LIMA1-208ENST00000551691 ANKRD29Q8N6D5 301 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 C1orf64Q8NEQ6 169 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 HIGD2AQ9BW72 106 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 DCSTAMPQ9H295 470 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 ENY2Q9NPA8 101 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 PKIGQ9Y2B9 76 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 R4GMQ9 66 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
LIMA1-208ENST00000551691 USH2AO75445 5202 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 A0A1B0GW54 56 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 ZNF705FA8MVS1 300 aaPredicted RBP2.17□□□□□ -2.06
LIMA1-208ENST00000551691 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.17□□□□□ -2.06
LIMA1-208ENST00000551691 COX7A2LO14548 114 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 PDE6DO43924 150 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 YPEL1O60688 119 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 GADD45GO95257 159 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 ZNF705BP0CI00 300 aaPredicted RBP2.17□□□□□ -2.06
LIMA1-208ENST00000551691 FGF6P10767 208 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 TSPEAR-AS2P59090 65 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 WFDC2Q14508 124 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 PYDC2Q56P42 97 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 ZNF322Q6U7Q0 402 aaPredicted RBP2.17□□□□□ -2.06
LIMA1-208ENST00000551691 ZNF705AQ6ZN79 300 aaPredicted RBP2.17□□□□□ -2.06
LIMA1-208ENST00000551691 TMEM136Q6ZRR5 245 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 S100A7AQ86SG5 101 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 ZFAND2AQ8N6M9 145 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 Q8N814 137 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 DAND5Q8N907 189 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 PXT1Q8NFP0 134 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 OR51A4Q8NGJ6 313 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 NEK7Q8TDX7 302 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 SFRP2Q96HF1 295 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 YPEL2Q96QA6 119 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 CCDC90BQ9GZT6 254 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 RABAC1Q9UI14 185 aa2.17□□□□□ -2.06
LIMA1-208ENST00000551691 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
LIMA1-208ENST00000551691 IGHV3-73A0A0B4J1V6 119 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 RIIAD1A6NNX1 92 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 GGTLC3B5MD39 225 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 FXYD1O00168 92 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 SLC17A3O00476 420 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 LECT2O14960 151 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 IFNGP01579 166 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 C1QBP02746 253 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 NPPCP23582 126 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 G0S2P27469 103 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 RPL27AP46776 148 aaKnown RBP2.16□□□□□ -2.06
LIMA1-208ENST00000551691 POLR2GP62487 172 aaKnown RBP eCLIP2.16□□□□□ -2.06
LIMA1-208ENST00000551691 RPL19P84098 196 aaKnown RBP2.16□□□□□ -2.06
LIMA1-208ENST00000551691 KISS1Q15726 138 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 AMMECR1LQ6DCA0 310 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 ADM2Q7Z4H4 148 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 C1orf158Q8N1D5 194 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 MIEN1Q9BRT3 115 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 UPK3BQ9BT76 320 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 YIPF3Q9GZM5 350 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 TMEM222Q9H0R3 208 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 CMC2Q9NRP2 79 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 GID8Q9NWU2 228 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 CMTM6Q9NX76 183 aa2.16□□□□□ -2.06
LIMA1-208ENST00000551691 TRBV7-1A0A0A6YYK4 115 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 LOC107986453A0A1B0GWG9 222 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 TMEM189A5PLL7 270 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 CDS2O95674 445 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 IGHV3-30-3P0DP02 117 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 S100A7P31151 101 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 TAS2R30P59541 319 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 TAS2R20P59543 309 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 RPL30P62888 115 aaKnown RBP2.15□□□□□ -2.07
LIMA1-208ENST00000551691 AKR1C1Q04828 323 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 DHRS2Q13268 280 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 GDF5OSQ5U4N7 250 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 LPCAT3Q6P1A2 487 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 OR51A2Q8NGJ7 313 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 CMTM2Q8TAZ6 248 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 PP6455Q8WZ26 134 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 IGF2BP2-AS1Q96M15 143 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 LINC01600Q96MT4 127 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 DPH3P1Q9H4G8 78 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 SMDT1Q9H4I9 107 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 TXNL4BQ9NX01 149 aaKnown RBP2.15□□□□□ -2.07
LIMA1-208ENST00000551691 PRO0461Q9UI25 63 aa2.15□□□□□ -2.07
LIMA1-208ENST00000551691 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
LIMA1-208ENST00000551691 TRBV20OR9-2A0A075B6H5 130 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 A0A096LPF7 62 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 TRAV14DV4A0A0A6YYC5 116 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 C9JCJ5 164 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 MCRIP1C9JLW8 97 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 INMT-MINDY4F8WBC2 141 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 NDUFA4O00483 81 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms