RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 LCE2BO14633 110 aa8.42□□□□□ -1.06
PTCH1-221ENST00000550914 IFNA7P01567 189 aa8.42□□□□□ -1.06
PTCH1-221ENST00000550914 Q86TA4 180 aa8.42□□□□□ -1.06
PTCH1-221ENST00000550914 OR11H4Q8NGC9 324 aa8.42□□□□□ -1.06
PTCH1-221ENST00000550914 HIST1H2BAQ96A08 127 aa8.42□□□□□ -1.06
PTCH1-221ENST00000550914 IGKV2D-24A0A075B6R9 120 aa8.41□□□□□ -1.06
PTCH1-221ENST00000550914 A0A087WX48 190 aa8.41□□□□□ -1.06
PTCH1-221ENST00000550914 TRBV10-1A0A0K0K1A3 114 aa8.41□□□□□ -1.06
PTCH1-221ENST00000550914 KRBOX1C9JBD0 128 aa8.41□□□□□ -1.06
PTCH1-221ENST00000550914 PEX7O00628 323 aa8.41□□□□□ -1.06
PTCH1-221ENST00000550914 ARMS2P0C7Q2 107 aa8.41□□□□□ -1.06
PTCH1-221ENST00000550914 KRTAP10-4P60372 401 aaPredicted RBP8.41□□□□□ -1.06
PTCH1-221ENST00000550914 LINC01620Q4KN68 170 aa8.41□□□□□ -1.06
PTCH1-221ENST00000550914 SFRP2Q96HF1 295 aa8.41□□□□□ -1.06
PTCH1-221ENST00000550914 KLK12Q9UKR0 248 aa8.41□□□□□ -1.06
PTCH1-221ENST00000550914 ZFP30Q9Y2G7 519 aa8.41□□□□□ -1.06
PTCH1-221ENST00000550914 CTXND1A0A1B0GTU2 59 aa8.4□□□□□ -1.06
PTCH1-221ENST00000550914 OXTP01178 125 aa8.4□□□□□ -1.06
PTCH1-221ENST00000550914 CRIP1P50238 77 aa8.4□□□□□ -1.06
PTCH1-221ENST00000550914 Q0VG73 95 aa8.4□□□□□ -1.06
PTCH1-221ENST00000550914 C14orf177Q52M58 125 aa8.4□□□□□ -1.06
PTCH1-221ENST00000550914 FAM162BQ5T6X4 162 aa8.4□□□□□ -1.06
PTCH1-221ENST00000550914 FAM74A4Q5TZK3 123 aa8.4□□□□□ -1.06
PTCH1-221ENST00000550914 KCNIP4Q6PIL6 250 aa8.4□□□□□ -1.06
PTCH1-221ENST00000550914 PHLDA3Q9Y5J5 127 aa8.4□□□□□ -1.06
PTCH1-221ENST00000550914 ALG5Q9Y673 324 aa8.4□□□□□ -1.06
PTCH1-221ENST00000550914 FAT3Q8TDW7 4589 aa8.39□□□□□ -1.07
PTCH1-221ENST00000550914 HMCN2Q8NDA2 5059 aa8.39□□□□□ -1.07
PTCH1-221ENST00000550914 A6NHS1 94 aa8.39□□□□□ -1.07
PTCH1-221ENST00000550914 IGLV2-8P01709 118 aa8.39□□□□□ -1.07
PTCH1-221ENST00000550914 RPL36AP83881 106 aaKnown RBP8.39□□□□□ -1.07
PTCH1-221ENST00000550914 CIRBP-AS1Q8TBR5 109 aa8.39□□□□□ -1.07
PTCH1-221ENST00000550914 RPL36ALQ969Q0 106 aaKnown RBP8.39□□□□□ -1.07
PTCH1-221ENST00000550914 UBE2WQ96B02 151 aa8.39□□□□□ -1.07
PTCH1-221ENST00000550914 ZC2HC1AQ96GY0 325 aa8.39□□□□□ -1.07
PTCH1-221ENST00000550914 FMC1Q96HJ9 113 aa8.39□□□□□ -1.07
PTCH1-221ENST00000550914 TRBV7-3A0A075B6L6 115 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 A0A087WWL8 130 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 BORCS7-ASMTA0A0B4J1R7 106 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 FAM74A7A6NL05 159 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 SH2D1AO60880 128 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 TPT1P13693 172 aaKnown RBP8.38□□□□□ -1.07
PTCH1-221ENST00000550914 UBE2D3P61077 147 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 UBE2D2P62837 147 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 ZNF726P1Q15940 193 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 ZNF674Q2M3X9 581 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 ZFP82Q8N141 532 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 INO80EQ8NBZ0 244 aaPredicted RBP8.38□□□□□ -1.07
PTCH1-221ENST00000550914 OR10G8Q8NGN5 311 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 DNAJC30Q96LL9 226 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 TCEAL7Q9BRU2 100 aa8.38□□□□□ -1.07
PTCH1-221ENST00000550914 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
PTCH1-221ENST00000550914 TRBV6-1A0A0K0K1D8 114 aa8.37□□□□□ -1.07
PTCH1-221ENST00000550914 GRIFINA4D1Z8 144 aa8.37□□□□□ -1.07
PTCH1-221ENST00000550914 M0R036 132 aa8.37□□□□□ -1.07
PTCH1-221ENST00000550914 UBE2G2P60604 165 aa8.37□□□□□ -1.07
PTCH1-221ENST00000550914 RPL7L1Q6DKI1 246 aaKnown RBP8.37□□□□□ -1.07
PTCH1-221ENST00000550914 C1orf43Q9BWL3 253 aa8.37□□□□□ -1.07
PTCH1-221ENST00000550914 MED28Q9H204 178 aa8.37□□□□□ -1.07
PTCH1-221ENST00000550914 M0R381 172 aa8.36□□□□□ -1.07
PTCH1-221ENST00000550914 GIPP09681 153 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-221ENST00000550914 FHITP49789 147 aa8.36□□□□□ -1.07
PTCH1-221ENST00000550914 PKIAP61925 76 aa8.36□□□□□ -1.07
PTCH1-221ENST00000550914 UBE2G1P62253 170 aa8.36□□□□□ -1.07
PTCH1-221ENST00000550914 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
PTCH1-221ENST00000550914 LTAP01374 205 aa8.35□□□□□ -1.07
PTCH1-221ENST00000550914 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
PTCH1-221ENST00000550914 RAB4BP61018 213 aa8.35□□□□□ -1.07
PTCH1-221ENST00000550914 Q5BKY6 102 aa8.35□□□□□ -1.07
PTCH1-221ENST00000550914 PTTG1O95997 202 aa8.34□□□□□ -1.07
PTCH1-221ENST00000550914 CRPP02741 224 aa8.34□□□□□ -1.07
PTCH1-221ENST00000550914 AKR1C8PQ5T2L2 129 aa8.34□□□□□ -1.07
PTCH1-221ENST00000550914 PRR27Q6MZM9 219 aa8.34□□□□□ -1.07
PTCH1-221ENST00000550914 ENHOQ6UWT2 76 aa8.34□□□□□ -1.07
PTCH1-221ENST00000550914 UBR4Q5T4S7 5183 aa8.33□□□□□ -1.08
PTCH1-221ENST00000550914 MAP1LC3B2A6NCE7 125 aa8.33□□□□□ -1.08
PTCH1-221ENST00000550914 TMEM262E9PQX1 116 aa8.33□□□□□ -1.08
PTCH1-221ENST00000550914 CXCL1P09341 107 aa8.33□□□□□ -1.08
PTCH1-221ENST00000550914 MIAQ16674 131 aa8.33□□□□□ -1.08
PTCH1-221ENST00000550914 DGAT2L7PQ6IED9 249 aa8.33□□□□□ -1.08
PTCH1-221ENST00000550914 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.33□□□□□ -1.08
PTCH1-221ENST00000550914 MAP1LC3BQ9GZQ8 125 aa8.33□□□□□ -1.08
PTCH1-221ENST00000550914 FXYD6-FXYD2A0A087WZ82 144 aa8.32□□□□□ -1.08
PTCH1-221ENST00000550914 TMSB15BA0A087X1C1 80 aa8.32□□□□□ -1.08
PTCH1-221ENST00000550914 MPV17L2Q567V2 206 aa8.32□□□□□ -1.08
PTCH1-221ENST00000550914 TMEM97Q5BJF2 176 aa8.32□□□□□ -1.08
PTCH1-221ENST00000550914 C15orf54Q8N8G6 183 aa8.32□□□□□ -1.08
PTCH1-221ENST00000550914 NEXN-AS1Q8NBZ9 246 aa8.32□□□□□ -1.08
PTCH1-221ENST00000550914 USP17L23D6RBM5 183 aa8.31□□□□□ -1.08
PTCH1-221ENST00000550914 ANGP03950 147 aaKnown RBP8.31□□□□□ -1.08
PTCH1-221ENST00000550914 S100A9P06702 114 aaKnown RBP8.31□□□□□ -1.08
PTCH1-221ENST00000550914 RPL37AP61513 92 aaKnown RBP8.31□□□□□ -1.08
PTCH1-221ENST00000550914 STOML3Q8TAV4 291 aa8.31□□□□□ -1.08
PTCH1-221ENST00000550914 ZNF471Q9BX82 626 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-221ENST00000550914 VAX2Q9UIW0 290 aa8.31□□□□□ -1.08
PTCH1-221ENST00000550914 SNAI2O43623 268 aa8.3□□□□□ -1.08
PTCH1-221ENST00000550914 AKR1C3P42330 323 aa8.3□□□□□ -1.08
PTCH1-221ENST00000550914 ZNF56Q15929 161 aa8.3□□□□□ -1.08
PTCH1-221ENST00000550914 CST9LP1Q5W188 147 aa8.3□□□□□ -1.08
PTCH1-221ENST00000550914 C9orf163Q8N9P6 203 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms