RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, human

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A1-208	ENST00000550173	PHLDA3	Q9Y5J5	127 aa		13.19	□□□□□ -0.3
SLC38A1-208	ENST00000550173	LECT2	O14960	151 aa		13.18	□□□□□ -0.3
SLC38A1-208	ENST00000550173	TPT1	P13693	172 aa	Known RBP	13.18	□□□□□ -0.3
SLC38A1-208	ENST00000550173	COX8C	Q7Z4L0	72 aa		13.18	□□□□□ -0.3
SLC38A1-208	ENST00000550173	FLG2	Q5D862	2391 aa	Predicted RBP	13.18	□□□□□ -0.3
SLC38A1-208	ENST00000550173		A0A087WWL8	130 aa		13.17	□□□□□ -0.3
SLC38A1-208	ENST00000550173	TMSB15B	A0A087X1C1	80 aa		13.17	□□□□□ -0.3
SLC38A1-208	ENST00000550173	C1QB	P02746	253 aa		13.17	□□□□□ -0.3
SLC38A1-208	ENST00000550173	CST9LP1	Q5W188	147 aa		13.17	□□□□□ -0.3
SLC38A1-208	ENST00000550173	SFRP2	Q96HF1	295 aa		13.17	□□□□□ -0.3
SLC38A1-208	ENST00000550173	URGCP-MRPS24	S4R325	110 aa		13.17	□□□□□ -0.3
SLC38A1-208	ENST00000550173		G3V3Q6	166 aa		13.16	□□□□□ -0.3
SLC38A1-208	ENST00000550173		M0R381	172 aa		13.16	□□□□□ -0.3
SLC38A1-208	ENST00000550173	ARPC5	O15511	151 aa		13.16	□□□□□ -0.3
SLC38A1-208	ENST00000550173	STOML3	Q8TAV4	291 aa		13.16	□□□□□ -0.3
SLC38A1-208	ENST00000550173	CYTL1	Q9NRR1	136 aa		13.16	□□□□□ -0.3
SLC38A1-208	ENST00000550173	SRRM2	Q9UQ35	2752 aa	Known RBP	13.15	□□□□□ -0.3
SLC38A1-208	ENST00000550173	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.15	□□□□□ -0.3
SLC38A1-208	ENST00000550173	TRBV6-1	A0A0K0K1D8	114 aa		13.15	□□□□□ -0.3
SLC38A1-208	ENST00000550173	FHIT	P49789	147 aa		13.15	□□□□□ -0.3
SLC38A1-208	ENST00000550173	ZNF674	Q2M3X9	581 aa		13.15	□□□□□ -0.3
SLC38A1-208	ENST00000550173	LINC01559	Q495D7	138 aa		13.15	□□□□□ -0.3
SLC38A1-208	ENST00000550173	NIT1	Q86X76	327 aa		13.15	□□□□□ -0.3
SLC38A1-208	ENST00000550173	COX11	Q9Y6N1	276 aa		13.15	□□□□□ -0.3
SLC38A1-208	ENST00000550173	LTA	P01374	205 aa		13.14	□□□□□ -0.31
SLC38A1-208	ENST00000550173	AKR1C3	P42330	323 aa		13.14	□□□□□ -0.31
SLC38A1-208	ENST00000550173	ZFP82	Q8N141	532 aa		13.14	□□□□□ -0.31
SLC38A1-208	ENST00000550173	BAALC	Q8WXS3	180 aa		13.14	□□□□□ -0.31
SLC38A1-208	ENST00000550173	RMI2	Q96E14	147 aa		13.14	□□□□□ -0.31
SLC38A1-208	ENST00000550173	TCEAL7	Q9BRU2	100 aa		13.14	□□□□□ -0.31
SLC38A1-208	ENST00000550173	HERC1	Q15751	4861 aa		13.14	□□□□□ -0.31
SLC38A1-208	ENST00000550173	SEC11B	P0C7V7	166 aa		13.13	□□□□□ -0.31
SLC38A1-208	ENST00000550173	KLK12	Q9UKR0	248 aa		13.13	□□□□□ -0.31
SLC38A1-208	ENST00000550173	IGKV2D-24	A0A075B6R9	120 aa		13.12	□□□□□ -0.31
SLC38A1-208	ENST00000550173	PAGE4	O60829	102 aa		13.12	□□□□□ -0.31
SLC38A1-208	ENST00000550173	RPL36A	P83881	106 aa	Known RBP	13.12	□□□□□ -0.31
SLC38A1-208	ENST00000550173	RPL36AL	Q969Q0	106 aa	Known RBP	13.12	□□□□□ -0.31
SLC38A1-208	ENST00000550173		A0A087WX48	190 aa		13.11	□□□□□ -0.31
SLC38A1-208	ENST00000550173	TRBV10-1	A0A0K0K1A3	114 aa		13.11	□□□□□ -0.31
SLC38A1-208	ENST00000550173	DNAJC30	Q96LL9	226 aa		13.11	□□□□□ -0.31
SLC38A1-208	ENST00000550173	KCNIP4	Q6PIL6	250 aa		13.1	□□□□□ -0.31
SLC38A1-208	ENST00000550173		Q6ZSA8	131 aa		13.1	□□□□□ -0.31
SLC38A1-208	ENST00000550173	UBE2W	Q96B02	151 aa		13.1	□□□□□ -0.31
SLC38A1-208	ENST00000550173	TRBV7-3	A0A075B6L6	115 aa		13.09	□□□□□ -0.31
SLC38A1-208	ENST00000550173	RBFOX3	A6NFN3	312 aa		13.09	□□□□□ -0.31
SLC38A1-208	ENST00000550173	SMLR1	H3BR10	107 aa		13.09	□□□□□ -0.31
SLC38A1-208	ENST00000550173	UBE2D3	P61077	147 aa		13.09	□□□□□ -0.31
SLC38A1-208	ENST00000550173	UBE2D2	P62837	147 aa		13.09	□□□□□ -0.31
SLC38A1-208	ENST00000550173	ELOB	Q15370	118 aa		13.09	□□□□□ -0.31
SLC38A1-208	ENST00000550173	RGS21	Q2M5E4	152 aa		13.09	□□□□□ -0.31
SLC38A1-208	ENST00000550173		Q8N976	141 aa		13.09	□□□□□ -0.31
SLC38A1-208	ENST00000550173	SFT2D1	Q8WV19	159 aa		13.09	□□□□□ -0.31
SLC38A1-208	ENST00000550173	CHCHD7	Q9BUK0	85 aa		13.09	□□□□□ -0.31
SLC38A1-208	ENST00000550173		A0A1B0GV50	99 aa		13.08	□□□□□ -0.32
SLC38A1-208	ENST00000550173	S100A9	P06702	114 aa	Known RBP	13.08	□□□□□ -0.32
SLC38A1-208	ENST00000550173	LINC01620	Q4KN68	170 aa		13.08	□□□□□ -0.32
SLC38A1-208	ENST00000550173	FAM213B	Q8TBF2	198 aa		13.08	□□□□□ -0.32
SLC38A1-208	ENST00000550173	PLA2G1B	P04054	148 aa	Known RBP	13.07	□□□□□ -0.32
SLC38A1-208	ENST00000550173	RPL19	P84098	196 aa	Known RBP	13.07	□□□□□ -0.32
SLC38A1-208	ENST00000550173	KCNRG	Q8N5I3	272 aa		13.07	□□□□□ -0.32
SLC38A1-208	ENST00000550173	MBD3L1	Q8WWY6	194 aa		13.07	□□□□□ -0.32
SLC38A1-208	ENST00000550173	MYCBP2	O75592	4640 aa		13.06	□□□□□ -0.32
SLC38A1-208	ENST00000550173	DNAH8	Q96JB1	4490 aa		13.06	□□□□□ -0.32
SLC38A1-208	ENST00000550173	SCO2	A0A1W2PP80	73 aa		13.06	□□□□□ -0.32
SLC38A1-208	ENST00000550173	PFDN1	O60925	122 aa		13.06	□□□□□ -0.32
SLC38A1-208	ENST00000550173	RAB4B	P61018	213 aa		13.06	□□□□□ -0.32
SLC38A1-208	ENST00000550173	ZNF56	Q15929	161 aa		13.06	□□□□□ -0.32
SLC38A1-208	ENST00000550173	LINC00528	Q8N1L1	170 aa		13.06	□□□□□ -0.32
SLC38A1-208	ENST00000550173	OR10AG1	Q8NH19	301 aa		13.06	□□□□□ -0.32
SLC38A1-208	ENST00000550173	UMAD1	C9J7I0	102 aa		13.05	□□□□□ -0.32
SLC38A1-208	ENST00000550173	TMEM262	E9PQX1	116 aa		13.05	□□□□□ -0.32
SLC38A1-208	ENST00000550173	BAGE2	Q86Y30	109 aa		13.05	□□□□□ -0.32
SLC38A1-208	ENST00000550173	OR10G8	Q8NGN5	311 aa		13.05	□□□□□ -0.32
SLC38A1-208	ENST00000550173	ZNF471	Q9BX82	626 aa	Predicted RBP	13.05	□□□□□ -0.32
SLC38A1-208	ENST00000550173	CXCL1	P09341	107 aa		13.04	□□□□□ -0.32
SLC38A1-208	ENST00000550173		Q0VG73	95 aa		13.04	□□□□□ -0.32
SLC38A1-208	ENST00000550173	ZNF345	Q14585	488 aa		13.04	□□□□□ -0.32
SLC38A1-208	ENST00000550173	NEXN-AS1	Q8NBZ9	246 aa		13.04	□□□□□ -0.32
SLC38A1-208	ENST00000550173	MLST8	Q9BVC4	326 aa		13.04	□□□□□ -0.32
SLC38A1-208	ENST00000550173	TRBV6-8	A0A0A6YYG3	113 aa		13.03	□□□□□ -0.32
SLC38A1-208	ENST00000550173	MUC21	A0A0G2JKD1	596 aa		13.03	□□□□□ -0.32
SLC38A1-208	ENST00000550173	MUC21	A0A140T8X8	626 aa		13.03	□□□□□ -0.32
SLC38A1-208	ENST00000550173		J3QL48	77 aa		13.03	□□□□□ -0.32
SLC38A1-208	ENST00000550173	SPANXN1	Q5VSR9	72 aa		13.03	□□□□□ -0.32
SLC38A1-208	ENST00000550173	ATRAID	Q6UW56	229 aa		13.03	□□□□□ -0.32
SLC38A1-208	ENST00000550173	SNAI2	O43623	268 aa		13.02	□□□□□ -0.33
SLC38A1-208	ENST00000550173	PRR27	Q6MZM9	219 aa		13.02	□□□□□ -0.33
SLC38A1-208	ENST00000550173	SCX	Q7RTU7	201 aa		13.02	□□□□□ -0.33
SLC38A1-208	ENST00000550173	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.02	□□□□□ -0.33
SLC38A1-208	ENST00000550173	C1orf43	Q9BWL3	253 aa		13.02	□□□□□ -0.33
SLC38A1-208	ENST00000550173		F5H697	171 aa		13.01	□□□□□ -0.33
SLC38A1-208	ENST00000550173	CRP	P02741	224 aa		13.01	□□□□□ -0.33
SLC38A1-208	ENST00000550173	H2AFB1	P0C5Y9	115 aa		13.01	□□□□□ -0.33
SLC38A1-208	ENST00000550173	SST	P61278	116 aa		13.01	□□□□□ -0.33
SLC38A1-208	ENST00000550173	C15orf54	Q8N8G6	183 aa		13.01	□□□□□ -0.33
SLC38A1-208	ENST00000550173	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.01	□□□□□ -0.33
SLC38A1-208	ENST00000550173		A0A0D9SG52	128 aa		13	□□□□□ -0.33
SLC38A1-208	ENST00000550173	KANTR	A0A1W2PQU2	76 aa		13	□□□□□ -0.33
SLC38A1-208	ENST00000550173	HMSD	A8MTL9	139 aa		13	□□□□□ -0.33
SLC38A1-208	ENST00000550173	OR5AL1	P0C617	328 aa		13	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms