RNA–Protein interactions for RNA: ENST00000549547.1

PRPF40B-210, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-210ENST00000549547 OR5AL1P0C617 328 aa8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 CEBPGP53567 150 aa8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 LINC00469Q8N7U9 141 aa8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 SLC25A29Q8N8R3 303 aa8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 SFRP2Q96HF1 295 aa8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 CARHSP1Q9Y2V2 147 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-210ENST00000549547 EPPK1P58107 5090 aaKnown RBP8.96□□□□□ -0.97
PRPF40B-210ENST00000549547 DNAH17Q9UFH2 4485 aa8.96□□□□□ -0.97
PRPF40B-210ENST00000549547 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
PRPF40B-210ENST00000549547 C19orf71A6NCJ1 209 aa8.96□□□□□ -0.98
PRPF40B-210ENST00000549547 SNAI2O43623 268 aa8.96□□□□□ -0.98
PRPF40B-210ENST00000549547 LYPD5Q6UWN5 251 aa8.96□□□□□ -0.98
PRPF40B-210ENST00000549547 ZNF575Q86XF7 245 aa8.96□□□□□ -0.98
PRPF40B-210ENST00000549547 LINC00518Q8N0U6 118 aa8.96□□□□□ -0.98
PRPF40B-210ENST00000549547 OR2D3Q8NGH3 330 aa8.96□□□□□ -0.98
PRPF40B-210ENST00000549547 SSBP4Q9BWG4 385 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-210ENST00000549547 A0A1W2PPQ1 181 aa8.95□□□□□ -0.98
PRPF40B-210ENST00000549547 NXPH4O95158 308 aa8.95□□□□□ -0.98
PRPF40B-210ENST00000549547 TIRAPP58753 221 aa8.95□□□□□ -0.98
PRPF40B-210ENST00000549547 FAM74A3Q4VXF1 159 aa8.95□□□□□ -0.98
PRPF40B-210ENST00000549547 SPANXN1Q5VSR9 72 aa8.95□□□□□ -0.98
PRPF40B-210ENST00000549547 OR10AG1Q8NH19 301 aa8.95□□□□□ -0.98
PRPF40B-210ENST00000549547 SMIM7Q9BQ49 75 aa8.95□□□□□ -0.98
PRPF40B-210ENST00000549547 LOC100131303A0A0U1RQF7 123 aa8.94□□□□□ -0.98
PRPF40B-210ENST00000549547 ZNF727A8MUV8 499 aa8.94□□□□□ -0.98
PRPF40B-210ENST00000549547 SIVA1O15304 175 aa8.94□□□□□ -0.98
PRPF40B-210ENST00000549547 C1orf134Q5TEV5 83 aa8.94□□□□□ -0.98
PRPF40B-210ENST00000549547 FAM74A4Q5TZK3 123 aa8.94□□□□□ -0.98
PRPF40B-210ENST00000549547 UFSP1Q6NVU6 142 aa8.94□□□□□ -0.98
PRPF40B-210ENST00000549547 JPT2Q9H910 190 aa8.94□□□□□ -0.98
PRPF40B-210ENST00000549547 HECTD4Q9Y4D8 3996 aa8.94□□□□□ -0.98
PRPF40B-210ENST00000549547 F2Z2F3 143 aa8.93□□□□□ -0.98
PRPF40B-210ENST00000549547 BTF3P20290 206 aaKnown RBP8.93□□□□□ -0.98
PRPF40B-210ENST00000549547 CACNG7P62955 275 aa8.93□□□□□ -0.98
PRPF40B-210ENST00000549547 FER1L6-AS1Q8NA97 138 aa8.93□□□□□ -0.98
PRPF40B-210ENST00000549547 OCC1Q8TAD7 63 aa8.93□□□□□ -0.98
PRPF40B-210ENST00000549547 SAMD10Q9BYL1 202 aa8.93□□□□□ -0.98
PRPF40B-210ENST00000549547 LY96Q9Y6Y9 160 aa8.93□□□□□ -0.98
PRPF40B-210ENST00000549547 TRAV9-2A0A087WT02 112 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 A0A087WWL8 130 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 K7EP13 123 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 APOC3P02656 99 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 CRYGDP07320 174 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 IGLC6P0CF74 106 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 SMIM17P0DL12 118 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 RPL23P62829 140 aaKnown RBP8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 TMEM241Q24JQ0 296 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 C6orf223Q8N319 242 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 NUDT10Q8NFP7 164 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 NUDT11Q96G61 164 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 AP1S3Q96PC3 154 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 TPPP3Q9BW30 176 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 NAT8Q9UHE5 227 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 FAT2Q9NYQ8 4349 aa8.92□□□□□ -0.98
PRPF40B-210ENST00000549547 TRBV10-1A0A0K0K1A3 114 aa8.91□□□□□ -0.98
PRPF40B-210ENST00000549547 RAB4BP61018 213 aa8.91□□□□□ -0.98
PRPF40B-210ENST00000549547 Q6ZSN1 163 aa8.91□□□□□ -0.98
PRPF40B-210ENST00000549547 LINC01551Q86U37 167 aa8.91□□□□□ -0.98
PRPF40B-210ENST00000549547 ATP6V0E2Q8NHE4 81 aa8.91□□□□□ -0.98
PRPF40B-210ENST00000549547 RPP21Q9H633 154 aaKnown RBP8.91□□□□□ -0.98
PRPF40B-210ENST00000549547 BIRC6Q9NR09 4857 aa8.9□□□□□ -0.98
PRPF40B-210ENST00000549547 TRAV8-6A0A0B4J262 113 aa8.9□□□□□ -0.98
PRPF40B-210ENST00000549547 K7EN84 100 aa8.9□□□□□ -0.98
PRPF40B-210ENST00000549547 RTL8CO15255 209 aa8.9□□□□□ -0.98
PRPF40B-210ENST00000549547 GZMBP10144 247 aa8.9□□□□□ -0.98
PRPF40B-210ENST00000549547 ZNF56Q15929 161 aa8.9□□□□□ -0.98
PRPF40B-210ENST00000549547 ATRAIDQ6UW56 229 aa8.9□□□□□ -0.98
PRPF40B-210ENST00000549547 FAM231DQ6ZW35 169 aa8.9□□□□□ -0.98
PRPF40B-210ENST00000549547 RNASE7Q9H1E1 156 aaKnown RBP8.9□□□□□ -0.98
PRPF40B-210ENST00000549547 GTSF1LQ9H1H1 148 aa8.9□□□□□ -0.98
PRPF40B-210ENST00000549547 MUC21A0A0G2JKD1 596 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 MUC21A0A140T8X8 626 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 GAGE12JA6NER3 117 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 PRSS29PA6NIE9 313 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 GATCO43716 136 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 LINC00694P0DN24 101 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 EVI2AP22794 236 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 PNRC1Q12796 327 aaPredicted RBP8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 GAGE1Q13065 139 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 GAGE4Q13068 117 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 GAGE5Q13069 117 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 GAGE13Q4V321 117 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 WDR73Q6P4I2 378 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 SVBPQ8N300 66 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 C14orf178Q8N769 122 aaPredicted RBP8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 CLRN3Q8NCR9 226 aa8.89□□□□□ -0.99
PRPF40B-210ENST00000549547 A0A087WWC5 75 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 SNAPINO95295 136 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 TRGC1P0CF51 173 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 DNAH10OSP0CZ25 163 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 CTRLP40313 264 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 ERVFC1-1P60608 527 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 SSTP61278 116 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 RPL36AP83881 106 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 CT83Q5H943 113 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 OR10J3Q5JRS4 329 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 LELP1Q5T871 98 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 WFDC10BQ8IUB3 73 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 C10orf126Q8N4M7 172 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms