RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SORL1Q92673 2214 aa10.58□□□□□ -0.72
RAPGEF3-218ENST00000548919 IGHV4-61A0A0C4DH41 118 aa10.57□□□□□ -0.72
RAPGEF3-218ENST00000548919 IGKV3-20P01619 116 aa10.57□□□□□ -0.72
RAPGEF3-218ENST00000548919 UBE2D1P51668 147 aa10.57□□□□□ -0.72
RAPGEF3-218ENST00000548919 NXPH4O95158 308 aa10.57□□□□□ -0.72
RAPGEF3-218ENST00000548919 PPP1R17O96001 155 aa10.57□□□□□ -0.72
RAPGEF3-218ENST00000548919 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
RAPGEF3-218ENST00000548919 TMEM170BQ5T4T1 132 aa10.57□□□□□ -0.72
RAPGEF3-218ENST00000548919 CSPG4Q6UVK1 2322 aa10.57□□□□□ -0.72
RAPGEF3-218ENST00000548919 KLLNB2CW77 178 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 NDUFS8O00217 210 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 IGHG2P01859 326 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 TMEM95Q3KNT9 176 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 CLEC2AQ6UVW9 174 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 ZNF418Q8TF45 676 aaPredicted RBP10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 USMG5Q96IX5 58 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 OPRPNQ99935 248 aaPredicted RBP10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 SPATA25Q9BR10 227 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 ZNF256Q9Y2P7 627 aaPredicted RBP10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 TRAV12-2A0A075B6T6 113 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 A0A0J9YY99 117 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 SDHAF1A6NFY7 115 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 A6NJY4 79 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 PMVKQ15126 192 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 PTH2Q96A98 100 aa10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 DAZ1Q9NQZ3 744 aaKnown RBP10.56□□□□□ -0.72
RAPGEF3-218ENST00000548919 IGHV4OR15-8A0A075B7B6 117 aa10.55□□□□□ -0.72
RAPGEF3-218ENST00000548919 A0A087WW49 117 aa10.55□□□□□ -0.72
RAPGEF3-218ENST00000548919 TGFAP01135 160 aa10.55□□□□□ -0.72
RAPGEF3-218ENST00000548919 CFAP126Q5VTH2 177 aa10.55□□□□□ -0.72
RAPGEF3-218ENST00000548919 DLX4Q92988 240 aaPredicted RBP10.55□□□□□ -0.72
RAPGEF3-218ENST00000548919 UCNP55089 124 aa10.55□□□□□ -0.72
RAPGEF3-218ENST00000548919 NFE4Q86UQ8 179 aa10.55□□□□□ -0.72
RAPGEF3-218ENST00000548919 KIR2DL4Q99706 377 aa10.55□□□□□ -0.72
RAPGEF3-218ENST00000548919 MDFICQ9P1T7 246 aa10.54□□□□□ -0.72
RAPGEF3-218ENST00000548919 VCYO14598 125 aa10.54□□□□□ -0.72
RAPGEF3-218ENST00000548919 ZNF688P0C7X2 276 aa10.54□□□□□ -0.72
RAPGEF3-218ENST00000548919 HERVK_113P61574 105 aa10.54□□□□□ -0.72
RAPGEF3-218ENST00000548919 NDUFA11Q86Y39 141 aa10.54□□□□□ -0.72
RAPGEF3-218ENST00000548919 A6NDX4 124 aa10.53□□□□□ -0.72
RAPGEF3-218ENST00000548919 FOXI1Q12951 378 aa10.53□□□□□ -0.72
RAPGEF3-218ENST00000548919 DCANP1Q8TF63 244 aa10.53□□□□□ -0.72
RAPGEF3-218ENST00000548919 ZANQ9Y493 2812 aa10.53□□□□□ -0.72
RAPGEF3-218ENST00000548919 DOPEY2Q9Y3R5 2298 aa10.53□□□□□ -0.72
RAPGEF3-218ENST00000548919 C1QTNF4Q9BXJ3 329 aa10.53□□□□□ -0.72
RAPGEF3-218ENST00000548919 TRBV7-9A0A0J9YWB2 115 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 CFC1BP0CG36 223 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 CFC1P0CG37 223 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 FLNCQ14315 2725 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 IGHV3-64A0A075B6Q5 118 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 IGLV1-40P01703 118 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 IGHV3-30P01768 117 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 IGHV3-30-5P0DP03 117 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 UBE2D3P61077 147 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 UBE2D2P62837 147 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 ZNF56Q15929 161 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 C10orf99Q6UWK7 81 aa10.52□□□□□ -0.73
RAPGEF3-218ENST00000548919 ZNF876PQ49A33 203 aa10.51□□□□□ -0.73
RAPGEF3-218ENST00000548919 SYT8Q8NBV8 401 aa10.51□□□□□ -0.73
RAPGEF3-218ENST00000548919 TMEM141Q96I45 108 aa10.51□□□□□ -0.73
RAPGEF3-218ENST00000548919 TRBV27A0A0K0K1C4 114 aa10.51□□□□□ -0.73
RAPGEF3-218ENST00000548919 H3BUA1 57 aa10.51□□□□□ -0.73
RAPGEF3-218ENST00000548919 TCL1BO95988 128 aa10.51□□□□□ -0.73
RAPGEF3-218ENST00000548919 RPL32P62910 135 aaKnown RBP10.51□□□□□ -0.73
RAPGEF3-218ENST00000548919 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
RAPGEF3-218ENST00000548919 AMELXQ99217 191 aa10.51□□□□□ -0.73
RAPGEF3-218ENST00000548919 TIMM17AQ99595 171 aa10.51□□□□□ -0.73
RAPGEF3-218ENST00000548919 SCGB1A1P11684 91 aa10.5□□□□□ -0.73
RAPGEF3-218ENST00000548919 FHL3Q13643 280 aa10.5□□□□□ -0.73
RAPGEF3-218ENST00000548919 SLC25A29Q8N8R3 303 aa10.5□□□□□ -0.73
RAPGEF3-218ENST00000548919 IGHV3-16A0A0C4DH30 117 aa10.5□□□□□ -0.73
RAPGEF3-218ENST00000548919 J3QQQ9 107 aa10.5□□□□□ -0.73
RAPGEF3-218ENST00000548919 ID1P41134 155 aa10.5□□□□□ -0.73
RAPGEF3-218ENST00000548919 Q8N1Y9 231 aa10.5□□□□□ -0.73
RAPGEF3-218ENST00000548919 CFAP46Q8IYW2 2715 aa10.5□□□□□ -0.73
RAPGEF3-218ENST00000548919 LGALS9O00182 355 aa10.49□□□□□ -0.73
RAPGEF3-218ENST00000548919 CFAP161Q6P656 301 aa10.49□□□□□ -0.73
RAPGEF3-218ENST00000548919 PIMREGQ9BSJ6 248 aa10.49□□□□□ -0.73
RAPGEF3-218ENST00000548919 M0QY20 66 aa10.49□□□□□ -0.73
RAPGEF3-218ENST00000548919 CREBBPQ92793 2442 aa10.49□□□□□ -0.73
RAPGEF3-218ENST00000548919 AVPP01185 164 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 GNLYP22749 145 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 SPINK13Q1W4C9 94 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 CDIP1Q9H305 208 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 CUBNO60494 3623 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 IGHV4-30-2A0A087WSY4 118 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 BRI3O95415 125 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 P0DMU3 169 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 FAM231AP0DMU4 169 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 FAM231CP0DMU5 169 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 LGALS3P17931 250 aaKnown RBP10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 RAX2Q96IS3 184 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 C9orf85Q96MD7 179 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 ZNF580Q9UK33 172 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 CIDEAO60543 219 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 CARD19Q96LW7 228 aa10.48□□□□□ -0.73
RAPGEF3-218ENST00000548919 CFHR3Q02985 330 aa10.47□□□□□ -0.73
RAPGEF3-218ENST00000548919 H7C2G1 150 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms