RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 GRIFINA4D1Z8 144 aa10.58□□□□□ -0.72
RAPGEF3-217ENST00000548434 C1QBP02746 253 aa10.58□□□□□ -0.72
RAPGEF3-217ENST00000548434 S100A4P26447 101 aaKnown RBP10.58□□□□□ -0.72
RAPGEF3-217ENST00000548434 AKR1C8PQ5T2L2 129 aa10.58□□□□□ -0.72
RAPGEF3-217ENST00000548434 OR11H4Q8NGC9 324 aa10.58□□□□□ -0.72
RAPGEF3-217ENST00000548434 MBD3L1Q8WWY6 194 aa10.58□□□□□ -0.72
RAPGEF3-217ENST00000548434 SMLR1H3BR10 107 aa10.57□□□□□ -0.72
RAPGEF3-217ENST00000548434 M0R036 132 aa10.57□□□□□ -0.72
RAPGEF3-217ENST00000548434 ARPC5O15511 151 aa10.57□□□□□ -0.72
RAPGEF3-217ENST00000548434 PSCAO43653 123 aa10.57□□□□□ -0.72
RAPGEF3-217ENST00000548434 FAM162BQ5T6X4 162 aa10.57□□□□□ -0.72
RAPGEF3-217ENST00000548434 KCNRGQ8N5I3 272 aa10.57□□□□□ -0.72
RAPGEF3-217ENST00000548434 TCEAL7Q9BRU2 100 aa10.57□□□□□ -0.72
RAPGEF3-217ENST00000548434 RHODO00212 210 aa10.56□□□□□ -0.72
RAPGEF3-217ENST00000548434 NIT1Q86X76 327 aa10.56□□□□□ -0.72
RAPGEF3-217ENST00000548434 A0A087WWC5 75 aa10.55□□□□□ -0.72
RAPGEF3-217ENST00000548434 ZNF345Q14585 488 aa10.55□□□□□ -0.72
RAPGEF3-217ENST00000548434 FRZBQ92765 325 aa10.55□□□□□ -0.72
RAPGEF3-217ENST00000548434 SSBP4Q9BWG4 385 aaPredicted RBP10.55□□□□□ -0.72
RAPGEF3-217ENST00000548434 LRP1Q07954 4544 aaKnown RBP10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 A0A087WWL8 130 aa10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 TRAV8-3A0A0A6YYJ7 113 aa10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 PAGE4O60829 102 aa10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 SEC11BP0C7V7 166 aa10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 UBE2D3P61077 147 aa10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 UBE2D2P62837 147 aa10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 PRR27Q6MZM9 219 aa10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 ATRAIDQ6UW56 229 aa10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 TM2D2Q9BX73 214 aa10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 PKHD1L1Q86WI1 4243 aa10.54□□□□□ -0.72
RAPGEF3-217ENST00000548434 HMSDA8MTL9 139 aa10.53□□□□□ -0.72
RAPGEF3-217ENST00000548434 CXCL1P09341 107 aa10.53□□□□□ -0.72
RAPGEF3-217ENST00000548434 RGS21Q2M5E4 152 aa10.53□□□□□ -0.72
RAPGEF3-217ENST00000548434 SYT8Q8NBV8 401 aa10.53□□□□□ -0.72
RAPGEF3-217ENST00000548434 OR10G8Q8NGN5 311 aa10.53□□□□□ -0.72
RAPGEF3-217ENST00000548434 TRBV10-1A0A0K0K1A3 114 aa10.52□□□□□ -0.73
RAPGEF3-217ENST00000548434 SNAI2O43623 268 aa10.52□□□□□ -0.73
RAPGEF3-217ENST00000548434 CST9LP1Q5W188 147 aa10.52□□□□□ -0.73
RAPGEF3-217ENST00000548434 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.73
RAPGEF3-217ENST00000548434 KIF25-AS1Q9Y6Z4 181 aa10.52□□□□□ -0.73
RAPGEF3-217ENST00000548434 FAT3Q8TDW7 4589 aa10.51□□□□□ -0.73
RAPGEF3-217ENST00000548434 TMSB15BA0A087X1C1 80 aa10.51□□□□□ -0.73
RAPGEF3-217ENST00000548434 SCO2A0A1W2PP80 73 aa10.51□□□□□ -0.73
RAPGEF3-217ENST00000548434 M0R381 172 aa10.51□□□□□ -0.73
RAPGEF3-217ENST00000548434 LECT2O14960 151 aa10.51□□□□□ -0.73
RAPGEF3-217ENST00000548434 UBE2G1P62253 170 aa10.51□□□□□ -0.73
RAPGEF3-217ENST00000548434 RPL19P84098 196 aaKnown RBP10.51□□□□□ -0.73
RAPGEF3-217ENST00000548434 BAALCQ8WXS3 180 aa10.51□□□□□ -0.73
RAPGEF3-217ENST00000548434 TPT1P13693 172 aaKnown RBP10.5□□□□□ -0.73
RAPGEF3-217ENST00000548434 KRTAP10-4P60372 401 aaPredicted RBP10.5□□□□□ -0.73
RAPGEF3-217ENST00000548434 FAM74A4Q5TZK3 123 aa10.5□□□□□ -0.73
RAPGEF3-217ENST00000548434 ZFP82Q8N141 532 aa10.5□□□□□ -0.73
RAPGEF3-217ENST00000548434 OR10AG1Q8NH19 301 aa10.5□□□□□ -0.73
RAPGEF3-217ENST00000548434 TRBV7-3A0A075B6L6 115 aa10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 UMAD1C9J7I0 102 aa10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 FAM229AH3BQW9 127 aa10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 S100A9P06702 114 aaKnown RBP10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 AKR1C3P42330 323 aa10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 RAB4BP61018 213 aa10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 TOR2AQ5JU69 321 aa10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 NEXN-AS1Q8NBZ9 246 aa10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 STOML3Q8TAV4 291 aa10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 SFT2D1Q8WV19 159 aa10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 CHCHD7Q9BUK0 85 aa10.49□□□□□ -0.73
RAPGEF3-217ENST00000548434 OR5AL1P0C617 328 aa10.48□□□□□ -0.73
RAPGEF3-217ENST00000548434 CCL20P78556 96 aa10.48□□□□□ -0.73
RAPGEF3-217ENST00000548434 ENHOQ6UWT2 76 aa10.48□□□□□ -0.73
RAPGEF3-217ENST00000548434 KLK12Q9UKR0 248 aa10.48□□□□□ -0.73
RAPGEF3-217ENST00000548434 A0A0D9SG52 128 aa10.47□□□□□ -0.73
RAPGEF3-217ENST00000548434 IGLV2-8P01709 118 aa10.47□□□□□ -0.73
RAPGEF3-217ENST00000548434 LINC01620Q4KN68 170 aa10.47□□□□□ -0.73
RAPGEF3-217ENST00000548434 NTM-AS1Q6ZSK4 140 aa10.47□□□□□ -0.73
RAPGEF3-217ENST00000548434 TMUB2Q71RG4 321 aa10.47□□□□□ -0.73
RAPGEF3-217ENST00000548434 BAGE2Q86Y30 109 aa10.47□□□□□ -0.73
RAPGEF3-217ENST00000548434 FAM213BQ8TBF2 198 aa10.47□□□□□ -0.73
RAPGEF3-217ENST00000548434 COX11Q9Y6N1 276 aa10.47□□□□□ -0.73
RAPGEF3-217ENST00000548434 TRBV6-8A0A0A6YYG3 113 aa10.46□□□□□ -0.73
RAPGEF3-217ENST00000548434 BCL2L11O43521 198 aa10.46□□□□□ -0.73
RAPGEF3-217ENST00000548434 RPL36AP83881 106 aaKnown RBP10.46□□□□□ -0.73
RAPGEF3-217ENST00000548434 KRTAP26-1Q6PEX3 210 aa10.46□□□□□ -0.73
RAPGEF3-217ENST00000548434 RPL36ALQ969Q0 106 aaKnown RBP10.46□□□□□ -0.73
RAPGEF3-217ENST00000548434 C11orf52Q96A22 123 aa10.46□□□□□ -0.73
RAPGEF3-217ENST00000548434 VAX2Q9UIW0 290 aa10.46□□□□□ -0.73
RAPGEF3-217ENST00000548434 TRAV1-1A0A0B4J248 108 aa10.45□□□□□ -0.74
RAPGEF3-217ENST00000548434 DERL1Q9BUN8 251 aa10.45□□□□□ -0.74
RAPGEF3-217ENST00000548434 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.44□□□□□ -0.74
RAPGEF3-217ENST00000548434 A0A1B0GV50 99 aa10.44□□□□□ -0.74
RAPGEF3-217ENST00000548434 Q8N976 141 aa10.44□□□□□ -0.74
RAPGEF3-217ENST00000548434 MUC21A0A0G2JKD1 596 aa10.43□□□□□ -0.74
RAPGEF3-217ENST00000548434 MUC21A0A140T8X8 626 aa10.43□□□□□ -0.74
RAPGEF3-217ENST00000548434 H2AFB1P0C5Y9 115 aa10.43□□□□□ -0.74
RAPGEF3-217ENST00000548434 IGLC6P0CF74 106 aa10.43□□□□□ -0.74
RAPGEF3-217ENST00000548434 RPL35P42766 123 aaKnown RBP10.43□□□□□ -0.74
RAPGEF3-217ENST00000548434 MPV17L2Q567V2 206 aa10.43□□□□□ -0.74
RAPGEF3-217ENST00000548434 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
RAPGEF3-217ENST00000548434 ZNF471Q9BX82 626 aaPredicted RBP10.43□□□□□ -0.74
RAPGEF3-217ENST00000548434 IGKV2D-24A0A075B6R9 120 aa10.42□□□□□ -0.74
RAPGEF3-217ENST00000548434 C19orf71A6NCJ1 209 aa10.42□□□□□ -0.74
RAPGEF3-217ENST00000548434 SCXQ7RTU7 201 aa10.42□□□□□ -0.74
RAPGEF3-217ENST00000548434 RMI2Q96E14 147 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms