RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 EIF5A2Q9GZV4 153 aaKnown RBP2.01□□□□□ -2.09
PTCH1-216ENST00000548379 GTSF1LQ9H1H1 148 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 DCSTAMPQ9H295 470 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 C8orf4Q9NR00 106 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 SCN3BQ9NY72 215 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 ZNF492Q9P255 531 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 KLK9Q9UKQ9 250 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 PRNDQ9UKY0 176 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 DNAH7Q8WXX0 4024 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 PCLOQ9Y6V0 5065 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 IGLC7A0M8Q6 106 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 KNCNA6PVL3 124 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 B4DEV8 164 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 CORTO00230 105 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 KRTAP5-8O75690 187 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 MT-CO2P00403 227 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 CTSGP08311 255 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 S100A2P29034 98 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 SNCAP37840 140 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 FXYD4P59646 89 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 GABARAPL2P60520 117 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 VBP1P61758 197 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 RPL30P62888 115 aaKnown RBP2□□□□□ -2.09
PTCH1-216ENST00000548379 FABP5Q01469 135 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 DHRS2Q13268 280 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 C12orf74Q32Q52 190 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 PSMG4Q5JS54 123 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 HACD4Q5VWC8 232 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 EBLN2Q6P2I7 272 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 ATP5L2Q7Z4Y8 100 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 SHANK2-AS3Q9BTD1 123 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 PDCD10Q9BUL8 212 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 ENY2Q9NPA8 101 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 STARD9Q9P2P6 4700 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 ALMS1Q8TCU4 4167 aa2□□□□□ -2.09
PTCH1-216ENST00000548379 IGKV1OR2-108A0A075B7D4 117 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 TRAV30A0A087WSZ9 112 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 TRAV8-1A0A0A6YYK1 113 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 TRAV3A0A0B4J244 114 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 NBDYA0A0U1RRE5 68 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 IFITM5A6NNB3 132 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 K7EIM0 57 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 GSTZ1O43708 216 aaPredicted RBP1.99□□□□□ -2.09
PTCH1-216ENST00000548379 ATG12O94817 140 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 PPYP01298 95 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 PTHLHP12272 177 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 ORM2P19652 201 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 SPCS3P61009 180 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 B2MP61769 119 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 RPS25P62851 125 aaKnown RBP1.99□□□□□ -2.09
PTCH1-216ENST00000548379 WT1-ASQ06250 92 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 JOSD1Q15040 202 aaPredicted RBP1.99□□□□□ -2.09
PTCH1-216ENST00000548379 BATFQ16520 125 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 RRN3P1Q2M238 152 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 LPCAT3Q6P1A2 487 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 TOMM20LQ6UXN7 152 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 TMEM144Q7Z5S9 345 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 SPATA12Q7Z6I5 190 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 AMN1Q8IY45 258 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 PACRGLQ8N7B6 248 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 Q8WTZ3 238 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 NDUFA4L2Q9NRX3 87 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 TPRKBQ9Y3C4 175 aa1.99□□□□□ -2.09
PTCH1-216ENST00000548379 HECTD4Q9Y4D8 3996 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 CSMD3Q7Z407 3707 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 TRAV1-2A0A0B4J238 106 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 TMEM235A6NFC5 223 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 I3L2K1 104 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 K7ERS5 55 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 OR5G3P0C626 314 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 CRYBB3P26998 211 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 G6PCP35575 357 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 LPAR6P43657 344 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 LINC00313P59037 77 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 HERVK_113P63121 156 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 IFITM2Q01629 132 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 FAM78BQ5VT40 261 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 SAMD13Q5VXD3 122 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 ZNF818PQ6ZRF7 136 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 ADM2Q7Z4H4 148 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 STX12Q86Y82 276 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 C1orf158Q8N1D5 194 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 ZNF664Q8N3J9 261 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 FAM24BQ8N5W8 94 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 FER1L6-AS1Q8NA97 138 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 OR4B1Q8NGF8 309 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 OR4C16Q8NGL9 310 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 RNASE11Q8TAA1 199 aaKnown RBP1.98□□□□□ -2.09
PTCH1-216ENST00000548379 MGLLQ99685 303 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 MED28Q9H204 178 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 VCX3BQ9H321 246 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 ZNF586Q9NXT0 402 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 R4GN34 69 aa1.98□□□□□ -2.09
PTCH1-216ENST00000548379 A0A1W2PNN7 141 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 ZNF705FA8MVS1 300 aaPredicted RBP1.97□□□□□ -2.09
PTCH1-216ENST00000548379 H3BMM0 161 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 H3BQ85 93 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 GPR31O00270 319 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms