RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SPINK13Q1W4C9 94 aa11.53□□□□□ -0.56
BRF1-212ENST00000547562 Q8N1Y9 231 aa11.52□□□□□ -0.56
BRF1-212ENST00000547562 Q8N2B8 174 aa11.52□□□□□ -0.56
BRF1-212ENST00000547562 Q96MF0 132 aa11.52□□□□□ -0.56
BRF1-212ENST00000547562 MDFICQ9P1T7 246 aa11.52□□□□□ -0.56
BRF1-212ENST00000547562 MYO9AB2RTY4 2548 aa11.52□□□□□ -0.56
BRF1-212ENST00000547562 TRBV25-1A0A075B6N4 114 aa11.52□□□□□ -0.57
BRF1-212ENST00000547562 TCTEX1D4Q5JR98 221 aa11.52□□□□□ -0.57
BRF1-212ENST00000547562 FOXI2Q6ZQN5 318 aa11.52□□□□□ -0.57
BRF1-212ENST00000547562 NEGR1Q7Z3B1 354 aa11.52□□□□□ -0.57
BRF1-212ENST00000547562 CHAC1Q9BUX1 264 aa11.52□□□□□ -0.57
BRF1-212ENST00000547562 CHTOPQ9Y3Y2 248 aaKnown RBP11.52□□□□□ -0.57
BRF1-212ENST00000547562 EPG5Q9HCE0 2579 aa11.51□□□□□ -0.57
BRF1-212ENST00000547562 IGHV1OR15-1A0A075B7D0 117 aa11.51□□□□□ -0.57
BRF1-212ENST00000547562 K7EP13 123 aa11.51□□□□□ -0.57
BRF1-212ENST00000547562 POLR2KP53803 58 aaKnown RBP11.51□□□□□ -0.57
BRF1-212ENST00000547562 BAALCQ8WXS3 180 aa11.51□□□□□ -0.57
BRF1-212ENST00000547562 F5H697 171 aa11.51□□□□□ -0.57
BRF1-212ENST00000547562 DEFB136Q30KP8 78 aa11.51□□□□□ -0.57
BRF1-212ENST00000547562 C18orf65Q6ZTR6 163 aa11.51□□□□□ -0.57
BRF1-212ENST00000547562 C9orf118A6NHY6 69 aa11.5□□□□□ -0.57
BRF1-212ENST00000547562 SLURP1P55000 103 aa11.5□□□□□ -0.57
BRF1-212ENST00000547562 AMTNQ6UX39 209 aa11.5□□□□□ -0.57
BRF1-212ENST00000547562 SYT8Q8NBV8 401 aa11.5□□□□□ -0.57
BRF1-212ENST00000547562 APCP25054 2843 aa11.5□□□□□ -0.57
BRF1-212ENST00000547562 FAM74A4Q5TZK3 123 aa11.49□□□□□ -0.57
BRF1-212ENST00000547562 MAPKAPK5-AS1Q8N8E1 139 aa11.49□□□□□ -0.57
BRF1-212ENST00000547562 VCYO14598 125 aa11.49□□□□□ -0.57
BRF1-212ENST00000547562 RNF151Q2KHN1 245 aa11.49□□□□□ -0.57
BRF1-212ENST00000547562 KRTAP1-3Q8IUG1 177 aa11.49□□□□□ -0.57
BRF1-212ENST00000547562 CYSLTR1Q9Y271 337 aa11.49□□□□□ -0.57
BRF1-212ENST00000547562 TLN2Q9Y4G6 2542 aa11.49□□□□□ -0.57
BRF1-212ENST00000547562 GCSHP23434 173 aa11.48□□□□□ -0.57
BRF1-212ENST00000547562 ZFP2Q6ZN57 461 aa11.48□□□□□ -0.57
BRF1-212ENST00000547562 KIR2DL4Q99706 377 aa11.48□□□□□ -0.57
BRF1-212ENST00000547562 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
BRF1-212ENST00000547562 SDHAF1A6NFY7 115 aa11.48□□□□□ -0.57
BRF1-212ENST00000547562 PRSS29PA6NIE9 313 aa11.48□□□□□ -0.57
BRF1-212ENST00000547562 LINC01549A6NIU2 74 aa11.47□□□□□ -0.57
BRF1-212ENST00000547562 LINC01619G3V211 115 aa11.47□□□□□ -0.57
BRF1-212ENST00000547562 CRYGDP07320 174 aa11.47□□□□□ -0.57
BRF1-212ENST00000547562 FXYD2P54710 66 aa11.47□□□□□ -0.57
BRF1-212ENST00000547562 TP53TG1Q9Y2A0 90 aa11.47□□□□□ -0.57
BRF1-212ENST00000547562 TRBV27A0A0K0K1C4 114 aa11.47□□□□□ -0.57
BRF1-212ENST00000547562 H3BUT2 72 aa11.47□□□□□ -0.57
BRF1-212ENST00000547562 JMJD8Q96S16 334 aa11.47□□□□□ -0.57
BRF1-212ENST00000547562 ZNF56Q15929 161 aa11.46□□□□□ -0.57
BRF1-212ENST00000547562 OR11H1Q8NG94 326 aa11.46□□□□□ -0.57
BRF1-212ENST00000547562 RAB37Q96AX2 223 aa11.46□□□□□ -0.57
BRF1-212ENST00000547562 ZNF469Q96JG9 3925 aaPredicted RBP11.46□□□□□ -0.57
BRF1-212ENST00000547562 ITPR3Q14573 2671 aa11.46□□□□□ -0.58
BRF1-212ENST00000547562 TRGV11A0A075B6L2 103 aa11.46□□□□□ -0.58
BRF1-212ENST00000547562 IGIPA6NJ69 53 aa11.46□□□□□ -0.58
BRF1-212ENST00000547562 KNCNA6PVL3 124 aa11.46□□□□□ -0.58
BRF1-212ENST00000547562 M0QY20 66 aa11.46□□□□□ -0.58
BRF1-212ENST00000547562 TSHBP01222 138 aa11.46□□□□□ -0.58
BRF1-212ENST00000547562 C4orf3Q8WVX3 66 aa11.46□□□□□ -0.58
BRF1-212ENST00000547562 TM2D2Q9BX73 214 aa11.46□□□□□ -0.58
BRF1-212ENST00000547562 OR11H12B2RN74 326 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 DEFB131AP59861 70 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
BRF1-212ENST00000547562 CEND1Q8N111 149 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 OR11H2Q8NH07 326 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 DEFB104AQ8WTQ1 72 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 PEMTQ9UBM1 199 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 GAGE10A6NGK3 116 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 SMIM13P0DJ93 91 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 RBMY1A1P0DJD3 496 aaKnown RBP11.45□□□□□ -0.58
BRF1-212ENST00000547562 RBMY1CP0DJD4 496 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 RIPPLY3P57055 190 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 RBMY1FQ15415 496 aaKnown RBP11.45□□□□□ -0.58
BRF1-212ENST00000547562 ZNF876PQ49A33 203 aa11.45□□□□□ -0.58
BRF1-212ENST00000547562 NAA38Q9BRA0 125 aaKnown RBP11.45□□□□□ -0.58
BRF1-212ENST00000547562 A8MTW9 85 aa11.44□□□□□ -0.58
BRF1-212ENST00000547562 RPL39P62891 51 aaKnown RBP11.44□□□□□ -0.58
BRF1-212ENST00000547562 DUX3Q96PT4 197 aa11.44□□□□□ -0.58
BRF1-212ENST00000547562 TRAV2A0A0B4J234 112 aa11.44□□□□□ -0.58
BRF1-212ENST00000547562 TAL2Q16559 108 aa11.44□□□□□ -0.58
BRF1-212ENST00000547562 TMEM61Q8N0U2 210 aa11.44□□□□□ -0.58
BRF1-212ENST00000547562 TMEM141Q96I45 108 aa11.44□□□□□ -0.58
BRF1-212ENST00000547562 MYMXA0A1B0GTQ4 84 aa11.43□□□□□ -0.58
BRF1-212ENST00000547562 E9PLD3 99 aa11.43□□□□□ -0.58
BRF1-212ENST00000547562 H3BMM0 161 aa11.43□□□□□ -0.58
BRF1-212ENST00000547562 KHDC1LQ5JSQ8 128 aa11.43□□□□□ -0.58
BRF1-212ENST00000547562 UFSP1Q6NVU6 142 aa11.43□□□□□ -0.58
BRF1-212ENST00000547562 GTF2H5Q6ZYL4 71 aa11.43□□□□□ -0.58
BRF1-212ENST00000547562 TRPT1Q86TN4 253 aaKnown RBP11.43□□□□□ -0.58
BRF1-212ENST00000547562 TIMM17AQ99595 171 aa11.43□□□□□ -0.58
BRF1-212ENST00000547562 ZNF256Q9Y2P7 627 aaPredicted RBP11.43□□□□□ -0.58
BRF1-212ENST00000547562 PMVKQ15126 192 aa11.42□□□□□ -0.58
BRF1-212ENST00000547562 TMEM86BQ8N661 226 aa11.42□□□□□ -0.58
BRF1-212ENST00000547562 SONP18583 2426 aaKnown RBP11.42□□□□□ -0.58
BRF1-212ENST00000547562 IGLV4-69A0A075B6H9 119 aa11.41□□□□□ -0.58
BRF1-212ENST00000547562 A0A1W2PPM0 123 aa11.41□□□□□ -0.58
BRF1-212ENST00000547562 GAGE12BA1L429 117 aa11.41□□□□□ -0.58
BRF1-212ENST00000547562 KLHL30-AS1Q8NEE0 82 aa11.41□□□□□ -0.58
BRF1-212ENST00000547562 DLX4Q92988 240 aaPredicted RBP11.41□□□□□ -0.58
BRF1-212ENST00000547562 PRADC1Q9BSG0 188 aa11.41□□□□□ -0.58
BRF1-212ENST00000547562 RBMY1BA6NDE4 496 aaKnown RBP11.41□□□□□ -0.58
BRF1-212ENST00000547562 RBMY1EA6NEQ0 496 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms