RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 FAM30AQ9NZY2 134 aa8.86□□□□□ -0.99
CPSF6-204ENST00000547486 A0A087WWL8 130 aa8.85□□□□□ -0.99
CPSF6-204ENST00000547486 TRBV6-1A0A0K0K1D8 114 aa8.85□□□□□ -0.99
CPSF6-204ENST00000547486 PAGE4O60829 102 aa8.85□□□□□ -0.99
CPSF6-204ENST00000547486 UBE2G1P62253 170 aa8.85□□□□□ -0.99
CPSF6-204ENST00000547486 LAGE3Q14657 143 aa8.85□□□□□ -0.99
CPSF6-204ENST00000547486 FAM74A4Q5TZK3 123 aa8.85□□□□□ -0.99
CPSF6-204ENST00000547486 OR11H4Q8NGC9 324 aa8.85□□□□□ -0.99
CPSF6-204ENST00000547486 DNAJC30Q96LL9 226 aa8.85□□□□□ -0.99
CPSF6-204ENST00000547486 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
CPSF6-204ENST00000547486 SYT8Q8NBV8 401 aa8.84□□□□□ -0.99
CPSF6-204ENST00000547486 STOML3Q8TAV4 291 aa8.84□□□□□ -0.99
CPSF6-204ENST00000547486 FRZBQ92765 325 aa8.84□□□□□ -0.99
CPSF6-204ENST00000547486 PHLDA3Q9Y5J5 127 aa8.84□□□□□ -0.99
CPSF6-204ENST00000547486 A0A087WWC5 75 aa8.83□□□□□ -1
CPSF6-204ENST00000547486 M0R381 172 aa8.83□□□□□ -1
CPSF6-204ENST00000547486 RHODO00212 210 aa8.83□□□□□ -1
CPSF6-204ENST00000547486 LECT2O14960 151 aa8.83□□□□□ -1
CPSF6-204ENST00000547486 KCNRGQ8N5I3 272 aa8.83□□□□□ -1
CPSF6-204ENST00000547486 MBD3L1Q8WWY6 194 aa8.83□□□□□ -1
CPSF6-204ENST00000547486 TCEAL7Q9BRU2 100 aa8.83□□□□□ -1
CPSF6-204ENST00000547486 TMEM70Q9BUB7 260 aa8.83□□□□□ -1
CPSF6-204ENST00000547486 TM2D2Q9BX73 214 aa8.83□□□□□ -1
CPSF6-204ENST00000547486 TRAV8-3A0A0A6YYJ7 113 aa8.82□□□□□ -1
CPSF6-204ENST00000547486 A0A1B0GV50 99 aa8.82□□□□□ -1
CPSF6-204ENST00000547486 TPT1P13693 172 aaKnown RBP8.82□□□□□ -1
CPSF6-204ENST00000547486 SFT2D1Q8WV19 159 aa8.82□□□□□ -1
CPSF6-204ENST00000547486 SEC11BP0C7V7 166 aa8.81□□□□□ -1
CPSF6-204ENST00000547486 AKR1C3P42330 323 aa8.81□□□□□ -1
CPSF6-204ENST00000547486 RPL19P84098 196 aaKnown RBP8.81□□□□□ -1
CPSF6-204ENST00000547486 NIT1Q86X76 327 aa8.81□□□□□ -1
CPSF6-204ENST00000547486 ZFP82Q8N141 532 aa8.81□□□□□ -1
CPSF6-204ENST00000547486 FAM213BQ8TBF2 198 aa8.81□□□□□ -1
CPSF6-204ENST00000547486 BAALCQ8WXS3 180 aa8.81□□□□□ -1
CPSF6-204ENST00000547486 MLST8Q9BVC4 326 aa8.81□□□□□ -1
CPSF6-204ENST00000547486 VPS13BQ7Z7G8 4022 aa8.81□□□□□ -1
CPSF6-204ENST00000547486 SCO2A0A1W2PP80 73 aa8.8□□□□□ -1
CPSF6-204ENST00000547486 UBE2D3P61077 147 aa8.8□□□□□ -1
CPSF6-204ENST00000547486 UBE2D2P62837 147 aa8.8□□□□□ -1
CPSF6-204ENST00000547486 ZNF345Q14585 488 aa8.8□□□□□ -1
CPSF6-204ENST00000547486 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
CPSF6-204ENST00000547486 DNAH8Q96JB1 4490 aa8.79□□□□□ -1
CPSF6-204ENST00000547486 TRBV10-1A0A0K0K1A3 114 aa8.79□□□□□ -1
CPSF6-204ENST00000547486 HMSDA8MTL9 139 aa8.79□□□□□ -1
CPSF6-204ENST00000547486 FAM229AH3BQW9 127 aa8.79□□□□□ -1
CPSF6-204ENST00000547486 TOR2AQ5JU69 321 aa8.79□□□□□ -1
CPSF6-204ENST00000547486 BAGE2Q86Y30 109 aa8.79□□□□□ -1
CPSF6-204ENST00000547486 OR10AG1Q8NH19 301 aa8.79□□□□□ -1
CPSF6-204ENST00000547486 KLK12Q9UKR0 248 aa8.79□□□□□ -1
CPSF6-204ENST00000547486 MYCBP2O75592 4640 aa8.79□□□□□ -1
CPSF6-204ENST00000547486 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.78□□□□□ -1
CPSF6-204ENST00000547486 MUC21A0A0G2JKD1 596 aa8.78□□□□□ -1
CPSF6-204ENST00000547486 MUC21A0A140T8X8 626 aa8.78□□□□□ -1
CPSF6-204ENST00000547486 UMAD1C9J7I0 102 aa8.78□□□□□ -1
CPSF6-204ENST00000547486 C1QBP02746 253 aa8.78□□□□□ -1
CPSF6-204ENST00000547486 S100A9P06702 114 aaKnown RBP8.78□□□□□ -1
CPSF6-204ENST00000547486 CCL20P78556 96 aa8.78□□□□□ -1
CPSF6-204ENST00000547486 LINC01620Q4KN68 170 aa8.78□□□□□ -1
CPSF6-204ENST00000547486 ZNF471Q9BX82 626 aaPredicted RBP8.78□□□□□ -1
CPSF6-204ENST00000547486 URGCP-MRPS24S4R325 110 aa8.78□□□□□ -1
CPSF6-204ENST00000547486 TRBV7-3A0A075B6L6 115 aa8.77□□□□□ -1.01
CPSF6-204ENST00000547486 A0A0D9SG52 128 aa8.77□□□□□ -1.01
CPSF6-204ENST00000547486 BCL2L11O43521 198 aa8.77□□□□□ -1.01
CPSF6-204ENST00000547486 RPL36AP83881 106 aaKnown RBP8.77□□□□□ -1.01
CPSF6-204ENST00000547486 Q6ZSA8 131 aa8.77□□□□□ -1.01
CPSF6-204ENST00000547486 TMUB2Q71RG4 321 aa8.77□□□□□ -1.01
CPSF6-204ENST00000547486 OR10G8Q8NGN5 311 aa8.77□□□□□ -1.01
CPSF6-204ENST00000547486 RPL36ALQ969Q0 106 aaKnown RBP8.77□□□□□ -1.01
CPSF6-204ENST00000547486 SSBP4Q9BWG4 385 aaPredicted RBP8.77□□□□□ -1.01
CPSF6-204ENST00000547486 IGKV2D-24A0A075B6R9 120 aa8.76□□□□□ -1.01
CPSF6-204ENST00000547486 H2AFB1P0C5Y9 115 aa8.76□□□□□ -1.01
CPSF6-204ENST00000547486 RAB4BP61018 213 aa8.76□□□□□ -1.01
CPSF6-204ENST00000547486 SSTP61278 116 aa8.76□□□□□ -1.01
CPSF6-204ENST00000547486 PRR27Q6MZM9 219 aa8.76□□□□□ -1.01
CPSF6-204ENST00000547486 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
CPSF6-204ENST00000547486 UBE2WQ96B02 151 aa8.76□□□□□ -1.01
CPSF6-204ENST00000547486 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
CPSF6-204ENST00000547486 A0A087WX48 190 aa8.75□□□□□ -1.01
CPSF6-204ENST00000547486 TRBV6-8A0A0A6YYG3 113 aa8.75□□□□□ -1.01
CPSF6-204ENST00000547486 KANTRA0A1W2PQU2 76 aa8.75□□□□□ -1.01
CPSF6-204ENST00000547486 SNAI2O43623 268 aa8.75□□□□□ -1.01
CPSF6-204ENST00000547486 PFDN1O60925 122 aa8.75□□□□□ -1.01
CPSF6-204ENST00000547486 CXCL1P09341 107 aa8.75□□□□□ -1.01
CPSF6-204ENST00000547486 ATRAIDQ6UW56 229 aa8.75□□□□□ -1.01
CPSF6-204ENST00000547486 ENHOQ6UWT2 76 aa8.75□□□□□ -1.01
CPSF6-204ENST00000547486 DERL1Q9BUN8 251 aa8.75□□□□□ -1.01
CPSF6-204ENST00000547486 TMEM262E9PQX1 116 aa8.74□□□□□ -1.01
CPSF6-204ENST00000547486 OR5AL1P0C617 328 aa8.74□□□□□ -1.01
CPSF6-204ENST00000547486 RPL35P42766 123 aaKnown RBP8.74□□□□□ -1.01
CPSF6-204ENST00000547486 ZNF56Q15929 161 aa8.74□□□□□ -1.01
CPSF6-204ENST00000547486 Q8N976 141 aa8.74□□□□□ -1.01
CPSF6-204ENST00000547486 RMI2Q96E14 147 aa8.74□□□□□ -1.01
CPSF6-204ENST00000547486 CHCHD7Q9BUK0 85 aa8.74□□□□□ -1.01
CPSF6-204ENST00000547486 KIF25-AS1Q9Y6Z4 181 aa8.74□□□□□ -1.01
CPSF6-204ENST00000547486 FLG2Q5D862 2391 aaPredicted RBP8.73□□□□□ -1.01
CPSF6-204ENST00000547486 RBFOX3A6NFN3 312 aa8.73□□□□□ -1.01
CPSF6-204ENST00000547486 SPANXN1Q5VSR9 72 aa8.73□□□□□ -1.01
CPSF6-204ENST00000547486 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
CPSF6-204ENST00000547486 F5H697 171 aa8.72□□□□□ -1.01
CPSF6-204ENST00000547486 IGLV2-8P01709 118 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms