RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 UBE2G2P60604 165 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 RPS20P60866 119 aaKnown RBP3.28□□□□□ -1.88
NPAS3-204ENST00000546849 RPL30P62888 115 aaKnown RBP3.28□□□□□ -1.88
NPAS3-204ENST00000546849 RPL18AQ02543 176 aaKnown RBP3.28□□□□□ -1.88
NPAS3-204ENST00000546849 ZNF826PQ6ZT77 177 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 ZNF833PQ6ZTB9 187 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 LINC00336Q6ZUF6 198 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 FAM231DQ6ZW35 169 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 LRP11Q86VZ4 500 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 C5orf17Q8NAS9 161 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 OR8B3Q8NGG8 313 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 OR4X1Q8NH49 305 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 YPEL4Q96NS1 127 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 OR8B2Q96RD0 313 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 TRGV9Q99603 122 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 HIST1H2BLQ99880 126 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 ASCL3Q9NQ33 180 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 MRPL27Q9P0M9 148 aaKnown RBP3.28□□□□□ -1.88
NPAS3-204ENST00000546849 NAGKQ9UJ70 344 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 ZFP30Q9Y2G7 519 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 INSIG2Q9Y5U4 225 aa3.28□□□□□ -1.88
NPAS3-204ENST00000546849 KIAA2026Q5HYC2 2103 aa3.28□□□□□ -1.89
NPAS3-204ENST00000546849 NBEAL2Q6ZNJ1 2754 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 FREM1Q5H8C1 2179 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 IZUMO1RA6ND01 250 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 LINC01619G3V211 115 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 ENSAO43768 121 aaKnown RBP3.27□□□□□ -1.89
NPAS3-204ENST00000546849 CNIH1O95406 144 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 CXCL1P09341 107 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 ESDP10768 282 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 NTF3P20783 257 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 RPL27AP46776 148 aaKnown RBP3.27□□□□□ -1.89
NPAS3-204ENST00000546849 ZNF137PP52743 207 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 KRTAP10-10P60014 251 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 PSG9Q00887 426 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 TFF3Q07654 80 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 SAMD13Q5VXD3 122 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 MIC13Q5XKP0 118 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 SSX7Q7RTT5 188 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 SMIM15Q7Z3B0 74 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 BPIFA4PQ86YQ2 179 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 MED12LQ86YW9 2145 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 CCL17Q92583 94 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 C18orf15Q96N68 181 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 MGST2Q99735 147 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 PMCHL2Q9BQD1 86 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 VSIRQ9H7M9 311 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 TMEM106BQ9NUM4 274 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 HSPB8Q9UJY1 196 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 HIGD1AQ9Y241 93 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 TBL2Q9Y4P3 447 aaKnown RBP3.27□□□□□ -1.89
NPAS3-204ENST00000546849 CSPG4Q6UVK1 2322 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 USF3Q68DE3 2245 aa3.27□□□□□ -1.89
NPAS3-204ENST00000546849 FLNAP21333 2647 aaKnown RBP3.26□□□□□ -1.89
NPAS3-204ENST00000546849 IGHV1-69-2A0A0G2JMI3 117 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 TEX50A0A1B0GTY4 177 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 LINC01549A6NIU2 74 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 TMEM238C9JI98 176 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 M0R1W7 72 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 SLC25A5P05141 298 aaKnown RBP3.26□□□□□ -1.89
NPAS3-204ENST00000546849 SAA1P0DJI8 122 aaPredicted RBP3.26□□□□□ -1.89
NPAS3-204ENST00000546849 CGB3P0DN86 165 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 CGB7P0DN87 165 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 RBX1P62877 108 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 PDE6HQ13956 83 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 VAMP3Q15836 100 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 TMEM155Q4W5P6 130 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 RPL39P5Q59GN2 51 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 CENPWQ5EE01 88 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 PYY3Q5JQD4 70 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 COL5A1-AS1Q5SY13 56 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 C1orf194Q5T5A4 169 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 ZCCHC24Q8N2G6 241 aaKnown RBP3.26□□□□□ -1.89
NPAS3-204ENST00000546849 DEFB108BQ8NET1 73 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 OR2D3Q8NGH3 330 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 TSKUQ8WUA8 353 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 RNASE6Q93091 150 aaKnown RBP3.26□□□□□ -1.89
NPAS3-204ENST00000546849 CHCHD1Q96BP2 118 aaKnown RBP3.26□□□□□ -1.89
NPAS3-204ENST00000546849 UBE2E2Q96LR5 201 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 GAFA1Q96PS6 74 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 CCL13Q99616 98 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 C2orf88Q9BSF0 95 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 TMEM191AQ9H0A3 160 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 TMEM133Q9H2Q1 129 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 PRORYQ9H606 182 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 OTORQ9NRC9 128 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 NDUFA4L2Q9NRX3 87 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 TMEM14CQ9P0S9 112 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 ZNF492Q9P255 531 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 UQCR10Q9UDW1 63 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 ESPL1Q14674 2120 aa3.26□□□□□ -1.89
NPAS3-204ENST00000546849 DOCK11Q5JSL3 2073 aa3.25□□□□□ -1.89
NPAS3-204ENST00000546849 IGHV3OR15-7A0A075B7D8 119 aa3.25□□□□□ -1.89
NPAS3-204ENST00000546849 TRAV8-6A0A0B4J262 113 aa3.25□□□□□ -1.89
NPAS3-204ENST00000546849 TRBV6-1A0A0K0K1D8 114 aa3.25□□□□□ -1.89
NPAS3-204ENST00000546849 SPAARA0A1B0GVQ0 90 aa3.25□□□□□ -1.89
NPAS3-204ENST00000546849 SMIM27A0A1W2PRY6 76 aa3.25□□□□□ -1.89
NPAS3-204ENST00000546849 A8MWP6 167 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms