RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CFDP00746 253 aaPredicted RBP1.41□□□□□ -2.18
SNHG1-224ENST00000545688 IGHV3-30P01768 117 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 IGHV3-33P01772 117 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 SLC25A5P05141 298 aaKnown RBP1.41□□□□□ -2.18
SNHG1-224ENST00000545688 NMBP08949 121 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 IGHV3-30-3P0DP02 117 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 IGHV3-30-5P0DP03 117 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 ATP5IP56385 69 aaPredicted RBP1.41□□□□□ -2.18
SNHG1-224ENST00000545688 GNG2P59768 71 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 RHOBP62745 196 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 RPL23P62829 140 aaKnown RBP1.41□□□□□ -2.18
SNHG1-224ENST00000545688 TRAM1Q15629 374 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 Q6ZQT7 251 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 LHFPL1Q86WI0 220 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 ZFAND2AQ8N6M9 145 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 ZNF738Q8NE65 137 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 ZNF555Q8NEP9 628 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 OR10P1Q8NGE3 313 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 CYGBQ8WWM9 190 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 ACY3Q96HD9 319 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 TP53RKQ96S44 253 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 PBDC1Q9BVG4 233 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 SLC25A31Q9H0C2 315 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 GTSF1LQ9H1H1 148 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 ATG5Q9H1Y0 275 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 DPH3P1Q9H4G8 78 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 DIABLOQ9NR28 239 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.41□□□□□ -2.18
SNHG1-224ENST00000545688 MRPL16Q9NX20 251 aaKnown RBP1.41□□□□□ -2.18
SNHG1-224ENST00000545688 RHBDL2Q9NX52 303 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 RRP15Q9Y3B9 282 aaKnown RBP1.41□□□□□ -2.18
SNHG1-224ENST00000545688 ORC6Q9Y5N6 252 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 U3KQ87 197 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
SNHG1-224ENST00000545688 TRAV4A0A0B4J268 109 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 TRGV4A0A0C4DH28 118 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 TRBV6-4A0A1B0GX49 114 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 TRDV1A0A1B0GX56 115 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 H7C1H1 209 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 K7EPK0 472 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 SLC17A3O00476 420 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 MYL12BO14950 172 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 GYG2O15488 501 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 MPDU1O75352 247 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 B3GALNT1O75752 331 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 IGLC2P0DOY2 106 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 RPL7P18124 248 aaKnown RBP1.4□□□□□ -2.19
SNHG1-224ENST00000545688 CXCL2P19875 107 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 CBX5P45973 191 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 MT1HP80294 61 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 MLLT11Q13015 90 aaPredicted RBP1.4□□□□□ -2.19
SNHG1-224ENST00000545688 OR10J3Q5JRS4 329 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 IDNKQ5T6J7 187 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 GPR107Q5VW38 600 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 ENHOQ6UWT2 76 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 PATE2Q6UY27 113 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 NIT1Q86X76 327 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 SLC25A29Q8N8R3 303 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 OR5H6Q8NGV6 325 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 LHFPL5Q8TAF8 219 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 GLYATL2Q8WU03 294 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 MGLLQ99685 303 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 MND1Q9BWT6 205 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 CCDC90BQ9GZT6 254 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 DUSP21Q9H596 190 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 ACOT13Q9NPJ3 140 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 TMEM56-RWDD3S4R434 201 aa1.4□□□□□ -2.19
SNHG1-224ENST00000545688 MUC21A0A0G2JKD1 596 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 GGTLC3B5MD39 225 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 ANKRD65E5RJM6 399 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 PDCD5O14737 125 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 PITX3O75364 302 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 ATG12O94817 140 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 PMP2P02689 132 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 IGLV7-43P04211 117 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 FABP1P07148 127 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 TAS2R46P59540 309 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 SEC61GP60059 68 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 BTN1A1Q13410 526 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 TPRXLQ17RH7 258 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 LPCAT3Q6P1A2 487 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 LCN15Q6UWW0 184 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 AHSA2Q719I0 299 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 SELENOHQ8IZQ5 122 aaKnown RBP1.39□□□□□ -2.19
SNHG1-224ENST00000545688 BPIFCQ8NFQ6 507 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 Q8TAT8 98 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 GPX8Q8TED1 209 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 PYDC1Q8WXC3 89 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 UBE2WQ96B02 151 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 ZC2HC1AQ96GY0 325 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 C2orf50Q96LR7 162 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 SLC50A1Q9BRV3 221 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 PDCD10Q9BUL8 212 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 C9orf16Q9BUW7 83 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 SAMD10Q9BYL1 202 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 FAM107BQ9H098 131 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 AGPAT4-IT1Q9H0P7 198 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 TMEM222Q9H0R3 208 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 ENY2Q9NPA8 101 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 MED4Q9NPJ6 270 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms