RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 LINC00482Q8N8I6 264 aa10□□□□□ -0.81
HCFC2-202ENST00000544223 CHCHD1Q96BP2 118 aaKnown RBP10□□□□□ -0.81
HCFC2-202ENST00000544223 ODF3Q96PU9 254 aa10□□□□□ -0.81
HCFC2-202ENST00000544223 F5H697 171 aa9.99□□□□□ -0.81
HCFC2-202ENST00000544223 ZNF876PQ49A33 203 aa9.99□□□□□ -0.81
HCFC2-202ENST00000544223 RASL10AQ92737 203 aa9.99□□□□□ -0.81
HCFC2-202ENST00000544223 TP73-AS1Q9UF72 201 aa9.99□□□□□ -0.81
HCFC2-202ENST00000544223 TCTAP57738 103 aa9.99□□□□□ -0.81
HCFC2-202ENST00000544223 DEFB125Q8N687 156 aa9.99□□□□□ -0.81
HCFC2-202ENST00000544223 Q9UF83 564 aa9.99□□□□□ -0.81
HCFC2-202ENST00000544223 LINC00315P59091 139 aa9.98□□□□□ -0.81
HCFC2-202ENST00000544223 C9orf85Q96MD7 179 aa9.98□□□□□ -0.81
HCFC2-202ENST00000544223 TMEM208Q9BTX3 173 aa9.98□□□□□ -0.81
HCFC2-202ENST00000544223 MAP1LC3AQ9H492 121 aa9.98□□□□□ -0.81
HCFC2-202ENST00000544223 DPH3P1Q9H4G8 78 aa9.98□□□□□ -0.81
HCFC2-202ENST00000544223 C19orf73Q9NVV2 129 aa9.98□□□□□ -0.81
HCFC2-202ENST00000544223 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
HCFC2-202ENST00000544223 TRAV2A0A0B4J234 112 aa9.97□□□□□ -0.81
HCFC2-202ENST00000544223 AP1S3Q96PC3 154 aa9.97□□□□□ -0.81
HCFC2-202ENST00000544223 GIG44P09565 113 aaPredicted RBP9.97□□□□□ -0.81
HCFC2-202ENST00000544223 P0DMU3 169 aa9.97□□□□□ -0.81
HCFC2-202ENST00000544223 FAM231AP0DMU4 169 aa9.97□□□□□ -0.81
HCFC2-202ENST00000544223 FAM231CP0DMU5 169 aa9.97□□□□□ -0.81
HCFC2-202ENST00000544223 C1orf158Q8N1D5 194 aa9.97□□□□□ -0.81
HCFC2-202ENST00000544223 BTF3P20290 206 aaKnown RBP9.96□□□□□ -0.81
HCFC2-202ENST00000544223 TRPT1Q86TN4 253 aaKnown RBP9.96□□□□□ -0.81
HCFC2-202ENST00000544223 TRAV25A0A0B4J276 109 aa9.96□□□□□ -0.82
HCFC2-202ENST00000544223 SUMO4Q6EEV6 95 aa9.96□□□□□ -0.82
HCFC2-202ENST00000544223 MRPL16Q9NX20 251 aaKnown RBP9.96□□□□□ -0.82
HCFC2-202ENST00000544223 A8MTW9 85 aa9.95□□□□□ -0.82
HCFC2-202ENST00000544223 SMIM17P0DL12 118 aa9.95□□□□□ -0.82
HCFC2-202ENST00000544223 TMEM70Q9BUB7 260 aa9.95□□□□□ -0.82
HCFC2-202ENST00000544223 NBEAL1Q6ZS30 2694 aa9.95□□□□□ -0.82
HCFC2-202ENST00000544223 IGLV2-18A0A075B6J9 118 aa9.95□□□□□ -0.82
HCFC2-202ENST00000544223 SYS1-DBNDD2H3BUS1 97 aa9.95□□□□□ -0.82
HCFC2-202ENST00000544223 PKIAP61925 76 aa9.95□□□□□ -0.82
HCFC2-202ENST00000544223 ZNF56Q15929 161 aa9.95□□□□□ -0.82
HCFC2-202ENST00000544223 NXPH4O95158 308 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 INSP01308 110 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 PPBPP02775 128 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 CRYGDP07320 174 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 TEX43Q6ZNM6 134 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 TMEM158Q8WZ71 300 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 C14orf144Q96I85 54 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 ZNF747Q9BV97 191 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 BEAN1Q3B7T3 259 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 KRTAP24-1Q3LI83 254 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 SVIPQ8NHG7 77 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 CITED1Q99966 193 aa9.94□□□□□ -0.82
HCFC2-202ENST00000544223 hDV102S1A0JD36 115 aa9.93□□□□□ -0.82
HCFC2-202ENST00000544223 TSTD3H0UI37 97 aa9.93□□□□□ -0.82
HCFC2-202ENST00000544223 MED14OSP0DP75 135 aa9.93□□□□□ -0.82
HCFC2-202ENST00000544223 Q6ZSN1 163 aa9.93□□□□□ -0.82
HCFC2-202ENST00000544223 IGLL1P15814 213 aa9.93□□□□□ -0.82
HCFC2-202ENST00000544223 VAMP8Q9BV40 100 aa9.93□□□□□ -0.82
HCFC2-202ENST00000544223 DDTP30046 118 aa9.92□□□□□ -0.82
HCFC2-202ENST00000544223 SUMO2P61956 95 aaKnown RBP9.92□□□□□ -0.82
HCFC2-202ENST00000544223 C11orf72Q8NBR9 251 aa9.92□□□□□ -0.82
HCFC2-202ENST00000544223 HBDP02042 147 aa9.92□□□□□ -0.82
HCFC2-202ENST00000544223 MORN3Q6PF18 240 aaPredicted RBP9.92□□□□□ -0.82
HCFC2-202ENST00000544223 CSTL1Q9H114 145 aa9.92□□□□□ -0.82
HCFC2-202ENST00000544223 TRGV11A0A075B6L2 103 aa9.91□□□□□ -0.82
HCFC2-202ENST00000544223 SPATA45Q537H7 98 aa9.91□□□□□ -0.82
HCFC2-202ENST00000544223 Q8N8P6 123 aa9.91□□□□□ -0.82
HCFC2-202ENST00000544223 MRAP2Q96G30 205 aa9.91□□□□□ -0.82
HCFC2-202ENST00000544223 MAP1LC3CQ9BXW4 147 aa9.91□□□□□ -0.82
HCFC2-202ENST00000544223 IGHV3-53P01767 116 aa9.91□□□□□ -0.82
HCFC2-202ENST00000544223 SMIM2Q9BVW6 85 aa9.91□□□□□ -0.82
HCFC2-202ENST00000544223 EMP1P54849 157 aa9.9□□□□□ -0.82
HCFC2-202ENST00000544223 ZNF705AQ6ZN79 300 aaPredicted RBP9.9□□□□□ -0.83
HCFC2-202ENST00000544223 PRIMA1Q86XR5 153 aa9.9□□□□□ -0.83
HCFC2-202ENST00000544223 SYT8Q8NBV8 401 aa9.9□□□□□ -0.83
HCFC2-202ENST00000544223 NXT2Q9NPJ8 142 aaKnown RBP9.9□□□□□ -0.83
HCFC2-202ENST00000544223 DKK2Q9UBU2 259 aa9.89□□□□□ -0.83
HCFC2-202ENST00000544223 HSPB8Q9UJY1 196 aa9.89□□□□□ -0.83
HCFC2-202ENST00000544223 NUDT3O95989 172 aa9.89□□□□□ -0.83
HCFC2-202ENST00000544223 LAGE3Q14657 143 aa9.89□□□□□ -0.83
HCFC2-202ENST00000544223 Q6ZTI0 123 aa9.89□□□□□ -0.83
HCFC2-202ENST00000544223 TRGV1A0A0A0MS02 117 aa9.88□□□□□ -0.83
HCFC2-202ENST00000544223 M0QY20 66 aa9.88□□□□□ -0.83
HCFC2-202ENST00000544223 ZC2HC1BQ5TFG8 222 aa9.88□□□□□ -0.83
HCFC2-202ENST00000544223 LAMTOR2Q9Y2Q5 125 aa9.88□□□□□ -0.83
HCFC2-202ENST00000544223 FCER1GP30273 86 aa9.88□□□□□ -0.83
HCFC2-202ENST00000544223 NUTF2P61970 127 aaKnown RBP9.88□□□□□ -0.83
HCFC2-202ENST00000544223 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
HCFC2-202ENST00000544223 LBHQ53QV2 105 aaPredicted RBP9.88□□□□□ -0.83
HCFC2-202ENST00000544223 POM121L12Q8N7R1 296 aa9.88□□□□□ -0.83
HCFC2-202ENST00000544223 IFI27L1Q96BM0 104 aa9.88□□□□□ -0.83
HCFC2-202ENST00000544223 NOP10Q9NPE3 64 aaKnown RBP9.88□□□□□ -0.83
HCFC2-202ENST00000544223 SDHAF1A6NFY7 115 aa9.87□□□□□ -0.83
HCFC2-202ENST00000544223 M0R2P5 195 aa9.87□□□□□ -0.83
HCFC2-202ENST00000544223 RIPPLY3P57055 190 aa9.87□□□□□ -0.83
HCFC2-202ENST00000544223 ZNF415Q09FC8 603 aa9.87□□□□□ -0.83
HCFC2-202ENST00000544223 OXLD1Q5BKU9 147 aa9.87□□□□□ -0.83
HCFC2-202ENST00000544223 TENM3Q9P273 2699 aa9.87□□□□□ -0.83
HCFC2-202ENST00000544223 KIR2DL5BA0A0G2JN68 375 aa9.87□□□□□ -0.83
HCFC2-202ENST00000544223 KIR2DL5BA0A0G2JPC4 375 aa9.87□□□□□ -0.83
HCFC2-202ENST00000544223 A0A1B0GV90 55 aa9.87□□□□□ -0.83
HCFC2-202ENST00000544223 CFAP126Q5VTH2 177 aa9.87□□□□□ -0.83
HCFC2-202ENST00000544223 KIR2DL5AQ8N109 375 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms