RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 CST9LP1Q5W188 147 aa8.76□□□□□ -1.01
RTN3-212ENST00000543123 Q6ZSN1 163 aa8.76□□□□□ -1.01
RTN3-212ENST00000543123 ZFP82Q8N141 532 aa8.76□□□□□ -1.01
RTN3-212ENST00000543123 DMBT1Q9UGM3 2413 aaPredicted RBP8.75□□□□□ -1.01
RTN3-212ENST00000543123 LTAP01374 205 aa8.75□□□□□ -1.01
RTN3-212ENST00000543123 C1QBP02746 253 aa8.75□□□□□ -1.01
RTN3-212ENST00000543123 S100A9P06702 114 aaKnown RBP8.75□□□□□ -1.01
RTN3-212ENST00000543123 AKR1C3P42330 323 aa8.75□□□□□ -1.01
RTN3-212ENST00000543123 LINC01559Q495D7 138 aa8.75□□□□□ -1.01
RTN3-212ENST00000543123 UFSP1Q6NVU6 142 aa8.75□□□□□ -1.01
RTN3-212ENST00000543123 KCNIP4Q6PIL6 250 aa8.75□□□□□ -1.01
RTN3-212ENST00000543123 TRBV10-1A0A0K0K1A3 114 aa8.74□□□□□ -1.01
RTN3-212ENST00000543123 GRIFINA4D1Z8 144 aa8.74□□□□□ -1.01
RTN3-212ENST00000543123 UMAD1C9J7I0 102 aa8.74□□□□□ -1.01
RTN3-212ENST00000543123 M0R381 172 aa8.74□□□□□ -1.01
RTN3-212ENST00000543123 CRIP1P50238 77 aa8.74□□□□□ -1.01
RTN3-212ENST00000543123 ZNF674Q2M3X9 581 aa8.74□□□□□ -1.01
RTN3-212ENST00000543123 C14orf178Q8N769 122 aaPredicted RBP8.74□□□□□ -1.01
RTN3-212ENST00000543123 SFRP2Q96HF1 295 aa8.74□□□□□ -1.01
RTN3-212ENST00000543123 SAMD10Q9BYL1 202 aa8.74□□□□□ -1.01
RTN3-212ENST00000543123 JPT2Q9H910 190 aa8.74□□□□□ -1.01
RTN3-212ENST00000543123 SRRM2Q9UQ35 2752 aaKnown RBP8.74□□□□□ -1.01
RTN3-212ENST00000543123 HERC1Q15751 4861 aa8.74□□□□□ -1.01
RTN3-212ENST00000543123 A0A087WX48 190 aa8.73□□□□□ -1.01
RTN3-212ENST00000543123 G3V3Q6 166 aa8.73□□□□□ -1.01
RTN3-212ENST00000543123 PFDN1O60925 122 aa8.73□□□□□ -1.01
RTN3-212ENST00000543123 RPL36AP83881 106 aaKnown RBP8.73□□□□□ -1.01
RTN3-212ENST00000543123 ZNF345Q14585 488 aa8.73□□□□□ -1.01
RTN3-212ENST00000543123 ELOBQ15370 118 aa8.73□□□□□ -1.01
RTN3-212ENST00000543123 DAZ4Q86SG3 579 aaKnown RBP8.73□□□□□ -1.01
RTN3-212ENST00000543123 RPL36ALQ969Q0 106 aaKnown RBP8.73□□□□□ -1.01
RTN3-212ENST00000543123 CHCHD7Q9BUK0 85 aa8.73□□□□□ -1.01
RTN3-212ENST00000543123 DAZ3Q9NR90 486 aaKnown RBP8.73□□□□□ -1.01
RTN3-212ENST00000543123 CYTL1Q9NRR1 136 aa8.73□□□□□ -1.01
RTN3-212ENST00000543123 A0A087WWL8 130 aa8.72□□□□□ -1.01
RTN3-212ENST00000543123 TMSB15BA0A087X1C1 80 aa8.72□□□□□ -1.01
RTN3-212ENST00000543123 SMR3BP02814 79 aaPredicted RBP8.72□□□□□ -1.01
RTN3-212ENST00000543123 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.72□□□□□ -1.01
RTN3-212ENST00000543123 MYCBP2O75592 4640 aa8.71□□□□□ -1.01
RTN3-212ENST00000543123 PAGE4O60829 102 aa8.71□□□□□ -1.02
RTN3-212ENST00000543123 EIF5AP63241 154 aaKnown RBP8.71□□□□□ -1.02
RTN3-212ENST00000543123 NIT1Q86X76 327 aa8.71□□□□□ -1.02
RTN3-212ENST00000543123 Q8N3U1 123 aa8.71□□□□□ -1.02
RTN3-212ENST00000543123 KCNRGQ8N5I3 272 aa8.71□□□□□ -1.02
RTN3-212ENST00000543123 FAM213BQ8TBF2 198 aa8.71□□□□□ -1.02
RTN3-212ENST00000543123 SFT2D1Q8WV19 159 aa8.71□□□□□ -1.02
RTN3-212ENST00000543123 TRBV7-3A0A075B6L6 115 aa8.7□□□□□ -1.02
RTN3-212ENST00000543123 CXCL1P09341 107 aa8.7□□□□□ -1.02
RTN3-212ENST00000543123 Q9UF83 564 aa8.7□□□□□ -1.02
RTN3-212ENST00000543123 IGKV2D-24A0A075B6R9 120 aa8.69□□□□□ -1.02
RTN3-212ENST00000543123 A0A0D9SG52 128 aa8.69□□□□□ -1.02
RTN3-212ENST00000543123 KANTRA0A1W2PQU2 76 aa8.69□□□□□ -1.02
RTN3-212ENST00000543123 LECT2O14960 151 aa8.69□□□□□ -1.02
RTN3-212ENST00000543123 RAB4BP61018 213 aa8.69□□□□□ -1.02
RTN3-212ENST00000543123 PKIAP61925 76 aa8.69□□□□□ -1.02
RTN3-212ENST00000543123 HAMPP81172 84 aa8.69□□□□□ -1.02
RTN3-212ENST00000543123 Q0VG73 95 aa8.69□□□□□ -1.02
RTN3-212ENST00000543123 Q8N976 141 aa8.69□□□□□ -1.02
RTN3-212ENST00000543123 MBD3L1Q8WWY6 194 aa8.69□□□□□ -1.02
RTN3-212ENST00000543123 ZNF471Q9BX82 626 aaPredicted RBP8.69□□□□□ -1.02
RTN3-212ENST00000543123 HMSDA8MTL9 139 aa8.68□□□□□ -1.02
RTN3-212ENST00000543123 UBE2D3P61077 147 aa8.68□□□□□ -1.02
RTN3-212ENST00000543123 UBE2D2P62837 147 aa8.68□□□□□ -1.02
RTN3-212ENST00000543123 ZNF56Q15929 161 aa8.68□□□□□ -1.02
RTN3-212ENST00000543123 BAGE2Q86Y30 109 aa8.68□□□□□ -1.02
RTN3-212ENST00000543123 OR10G8Q8NGN5 311 aa8.68□□□□□ -1.02
RTN3-212ENST00000543123 KLK12Q9UKR0 248 aa8.68□□□□□ -1.02
RTN3-212ENST00000543123 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.67□□□□□ -1.02
RTN3-212ENST00000543123 SCO2A0A1W2PP80 73 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 RBFOX3A6NFN3 312 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 SMLR1H3BR10 107 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 BCL2L11O43521 198 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
RTN3-212ENST00000543123 WFDC2Q14508 124 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 SPANXN1Q5VSR9 72 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 Q6ZNX1 250 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 Q6ZSA8 131 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 BAALCQ8WXS3 180 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 UBE2WQ96B02 151 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 DNAH8Q96JB1 4490 aa8.67□□□□□ -1.02
RTN3-212ENST00000543123 TRBV6-8A0A0A6YYG3 113 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 A0A1B0GV50 99 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 TMEM262E9PQX1 116 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 CRPP02741 224 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 SMIM17P0DL12 118 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 C14orf177Q52M58 125 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 TMEM97Q5BJF2 176 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 OR10AG1Q8NH19 301 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 MLST8Q9BVC4 326 aa8.66□□□□□ -1.02
RTN3-212ENST00000543123 TEX46H3BTG2 121 aa8.65□□□□□ -1.02
RTN3-212ENST00000543123 SNAI2O43623 268 aa8.65□□□□□ -1.02
RTN3-212ENST00000543123 RPL19P84098 196 aaKnown RBP8.65□□□□□ -1.02
RTN3-212ENST00000543123 PRR27Q6MZM9 219 aa8.65□□□□□ -1.02
RTN3-212ENST00000543123 ATRAIDQ6UW56 229 aa8.65□□□□□ -1.02
RTN3-212ENST00000543123 AP1S3Q96PC3 154 aa8.65□□□□□ -1.02
RTN3-212ENST00000543123 C1orf43Q9BWL3 253 aa8.65□□□□□ -1.02
RTN3-212ENST00000543123 MANBALQ9NQG1 85 aa8.65□□□□□ -1.02
RTN3-212ENST00000543123 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms