RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 LINC01551Q86U37 167 aa4.85□□□□□ -1.63
PAAF1-212ENST00000543079 C11orf72Q8NBR9 251 aa4.85□□□□□ -1.63
PAAF1-212ENST00000543079 RNASE8Q8TDE3 154 aaKnown RBP4.85□□□□□ -1.63
PAAF1-212ENST00000543079 TMEM208Q9BTX3 173 aa4.85□□□□□ -1.63
PAAF1-212ENST00000543079 LY96Q9Y6Y9 160 aa4.85□□□□□ -1.63
PAAF1-212ENST00000543079 DNAH10Q8IVF4 4471 aa4.85□□□□□ -1.63
PAAF1-212ENST00000543079 MUC4Q99102 2169 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 KRBOX1C9JBD0 128 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 DEFB4AO15263 64 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 MGST1P10620 155 aaKnown RBP4.84□□□□□ -1.63
PAAF1-212ENST00000543079 MIFP14174 115 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 HTN1P15515 57 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 AMTP48728 403 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 RPL23P62829 140 aaKnown RBP4.84□□□□□ -1.63
PAAF1-212ENST00000543079 TMEM241Q24JQ0 296 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 RRN3P1Q2M238 152 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 PRR27Q6MZM9 219 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 SLC7A5P1Q8MH63 180 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 SDF2L1Q9HCN8 221 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 NAGKQ9UJ70 344 aa4.84□□□□□ -1.63
PAAF1-212ENST00000543079 IGHV3-16A0A0C4DH30 117 aa4.83□□□□□ -1.64
PAAF1-212ENST00000543079 A0A0J9YWU9 116 aa4.83□□□□□ -1.64
PAAF1-212ENST00000543079 M0R036 132 aa4.83□□□□□ -1.64
PAAF1-212ENST00000543079 ORM1P02763 201 aa4.83□□□□□ -1.64
PAAF1-212ENST00000543079 TYMSP04818 313 aa4.83□□□□□ -1.64
PAAF1-212ENST00000543079 RPL19P84098 196 aaKnown RBP4.83□□□□□ -1.64
PAAF1-212ENST00000543079 C10orf91Q5T1B1 145 aa4.83□□□□□ -1.64
PAAF1-212ENST00000543079 FAM159AQ6UWV7 190 aa4.83□□□□□ -1.64
PAAF1-212ENST00000543079 TMEM263Q8WUH6 116 aaKnown RBP4.83□□□□□ -1.64
PAAF1-212ENST00000543079 ISOC2Q96AB3 205 aa4.83□□□□□ -1.64
PAAF1-212ENST00000543079 RNASE7Q9H1E1 156 aaKnown RBP4.83□□□□□ -1.64
PAAF1-212ENST00000543079 C11orf68Q9H3H3 251 aaKnown RBP4.83□□□□□ -1.64
PAAF1-212ENST00000543079 GSN-AS1Q9NRJ2 163 aa4.83□□□□□ -1.64
PAAF1-212ENST00000543079 NAT8Q9UHE5 227 aa4.83□□□□□ -1.64
PAAF1-212ENST00000543079 KMT2AQ03164 3969 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 TMSB15BA0A087X1C1 80 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 B4DEV8 164 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 VPREB1P12018 145 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 RNASE3P12724 160 aaKnown RBP4.82□□□□□ -1.64
PAAF1-212ENST00000543079 TCL1AP56279 114 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 DAZ2Q13117 558 aaKnown RBP4.82□□□□□ -1.64
PAAF1-212ENST00000543079 DNLZQ5SXM8 178 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 IBA57Q5T440 356 aaKnown RBP4.82□□□□□ -1.64
PAAF1-212ENST00000543079 ZNF493Q6ZR52 646 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 FAM231DQ6ZW35 169 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 C16orf74Q96GX8 76 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 KCNS1Q96KK3 526 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 C9orf85Q96MD7 179 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 SEC11CQ9BY50 192 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 BIN3Q9NQY0 253 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 CELA1Q9UNI1 258 aa4.82□□□□□ -1.64
PAAF1-212ENST00000543079 GRIFINA4D1Z8 144 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 TMEM189A5PLL7 270 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 F8W036 122 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 SPINK4O60575 86 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 P01737 135 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 CXCL1P09341 107 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 GZMBP10144 247 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 EMP1P54849 157 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 ADIRFQ15847 76 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 LINC00612Q8N6U2 182 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 SFRP2Q96HF1 295 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 NOP10Q9NPE3 64 aaKnown RBP4.81□□□□□ -1.64
PAAF1-212ENST00000543079 SCRT2Q9NQ03 307 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 OSTCQ9NRP0 149 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 CARHSP1Q9Y2V2 147 aaKnown RBP4.81□□□□□ -1.64
PAAF1-212ENST00000543079 V9GYV3 84 aa4.81□□□□□ -1.64
PAAF1-212ENST00000543079 GAS8-AS1O95177 125 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 ARMS2P0C7Q2 107 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 IGLC6P0CF74 106 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 ASIPP42127 132 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 ZNF415Q09FC8 603 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 PNRC1Q12796 327 aaPredicted RBP4.8□□□□□ -1.64
PAAF1-212ENST00000543079 C12orf74Q32Q52 190 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 FAM222AQ5U5X8 452 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 Q6ZTI0 123 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 OR2D3Q8NGH3 330 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 GTSF1Q8WW33 167 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 RPP21Q9H633 154 aaKnown RBP4.8□□□□□ -1.64
PAAF1-212ENST00000543079 IL36BQ9NZH7 164 aa4.8□□□□□ -1.64
PAAF1-212ENST00000543079 TIMM8BQ9Y5J9 83 aaPredicted RBP4.8□□□□□ -1.64
PAAF1-212ENST00000543079 LYRM9A8MSI8 78 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 SNURFLB1AK76 121 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 H3BVH4 76 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 SNAI2O43623 268 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 GATCO43716 136 aaKnown RBP4.79□□□□□ -1.64
PAAF1-212ENST00000543079 NXPH4O95158 308 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 OR5AL1P0C617 328 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 SPART-AS1P0CW21 52 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 FOXA3P55318 350 aaPredicted RBP4.79□□□□□ -1.64
PAAF1-212ENST00000543079 RPS20P60866 119 aaKnown RBP4.79□□□□□ -1.64
PAAF1-212ENST00000543079 NDUFA5Q16718 116 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 LGALS9BQ3B8N2 356 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 OR10G8Q8NGN5 311 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 RASL10AQ92737 203 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 PTH2Q96A98 100 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 SPXQ9BT56 116 aa4.79□□□□□ -1.64
PAAF1-212ENST00000543079 MRPL16Q9NX20 251 aaKnown RBP4.79□□□□□ -1.64
PAAF1-212ENST00000543079 IGLV5-52A0A0A0MRZ9 124 aa4.78□□□□□ -1.64
PAAF1-212ENST00000543079 TRGV1A0A0A0MS02 117 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms