RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 C12orf45Q8N5I9 185 aaPredicted RBP2.93□□□□□ -1.94
LIMS1-214ENST00000542845 C14orf178Q8N769 122 aaPredicted RBP2.93□□□□□ -1.94
LIMS1-214ENST00000542845 OR1L4Q8NGR5 311 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 LINC00479Q96M42 142 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 MGST2Q99735 147 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 SDF2L1Q9HCN8 221 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 PSORS1C2Q9UIG4 136 aa2.93□□□□□ -1.94
LIMS1-214ENST00000542845 F6UZH7 168 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 TSHBP01222 138 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 AKAIN1P0CW23 69 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 CSN1S1P47710 185 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 FGF8P55075 233 aaPredicted RBP2.92□□□□□ -1.94
LIMS1-214ENST00000542845 GABARAPL2P60520 117 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 SRPXP78539 464 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 MPV17L2Q567V2 206 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 ZNF506Q5JVG8 444 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 Q6AWC8 147 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 Q6ZRP5 223 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 INO80EQ8NBZ0 244 aaPredicted RBP2.92□□□□□ -1.94
LIMS1-214ENST00000542845 ASB13Q8WXK3 278 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 KCNS1Q96KK3 526 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 HYLS1Q96M11 299 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 SCGB3A2Q96PL1 93 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 JPT2Q9H910 190 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 MCUBQ9NWR8 336 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 EXTL2Q9UBQ6 330 aa2.92□□□□□ -1.94
LIMS1-214ENST00000542845 TRAV21A0A0B4J279 112 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 K7EPK0 472 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 CCSO14618 274 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 NDUFS6O75380 124 aaKnown RBP2.91□□□□□ -1.94
LIMS1-214ENST00000542845 NBEAP1P0C6P0 100 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 SLC25A6P12236 298 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 LINC01547P58512 204 aaPredicted RBP2.91□□□□□ -1.94
LIMS1-214ENST00000542845 CNBPP62633 177 aaKnown RBP2.91□□□□□ -1.94
LIMS1-214ENST00000542845 RANP62826 216 aaKnown RBP2.91□□□□□ -1.94
LIMS1-214ENST00000542845 ARL16Q0P5N6 197 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 PDE6HQ13956 83 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 MIAQ16674 131 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 LINC00269Q8N2A0 174 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 PFDN5Q99471 154 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 PRRT1Q99946 306 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 CHCHD5Q9BSY4 110 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 CHCHD7Q9BUK0 85 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 NMES1Q9C002 83 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 SCP2D1Q9UJQ7 156 aa2.91□□□□□ -1.94
LIMS1-214ENST00000542845 TRBV7-9A0A0J9YWB2 115 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 DUXBA0A1W2PPF3 345 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 TSC22D2O75157 780 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 MT-ND6P03923 174 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 LINC00694P0DN24 101 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 FAM74A4Q5TZK3 123 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 TMEM14EPQ6UXP3 125 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 SMIM8Q96KF7 97 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 C2orf48Q96LS8 159 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 BCL7BQ9BQE9 202 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 PARLQ9H300 379 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 TREM1Q9NP99 234 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 TMEM14CQ9P0S9 112 aa2.9□□□□□ -1.95
LIMS1-214ENST00000542845 RABL2AQ9UBK7 228 aaPredicted RBP2.9□□□□□ -1.95
LIMS1-214ENST00000542845 A0A096LNI7 61 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 PIGBOS1A0A0B4J2F0 54 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 RBAKDNA6NC62 111 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 FAM24AA6NFZ4 105 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 A8MWV9 139 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 FNDC10F2Z333 226 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 RGS5O15539 181 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 PTTG1O95997 202 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 S100A4P26447 101 aaKnown RBP2.89□□□□□ -1.95
LIMS1-214ENST00000542845 RPS10P46783 165 aaKnown RBP2.89□□□□□ -1.95
LIMS1-214ENST00000542845 BCAP31P51572 246 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 UBE2D1P51668 147 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 VBP1P61758 197 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 BAXQ07812 192 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 HIGD2BQ4VC39 106 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 GCSAMLQ5JQS6 135 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 KRTAP26-1Q6PEX3 210 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 ZFP2Q6ZN57 461 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 Q6ZVQ6 151 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 MIR17HGQ75NE6 70 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 LINC00518Q8N0U6 118 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 OR10G7Q8NGN6 311 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 DYNC2LI1Q8TCX1 351 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 C15orf40Q8WUR7 153 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 PHYHIPLQ96FC7 376 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 C9orf85Q96MD7 179 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 SLC25A2Q9BXI2 301 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 GFRA4Q9GZZ7 299 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 GSKIPQ9P0R6 139 aa2.89□□□□□ -1.95
LIMS1-214ENST00000542845 TRBV6-8A0A0A6YYG3 113 aa2.88□□□□□ -1.95
LIMS1-214ENST00000542845 TRAV1-1A0A0B4J248 108 aa2.88□□□□□ -1.95
LIMS1-214ENST00000542845 SMIM1B2RUZ4 78 aa2.88□□□□□ -1.95
LIMS1-214ENST00000542845 K7EQM0 130 aa2.88□□□□□ -1.95
LIMS1-214ENST00000542845 L7N2F9 121 aa2.88□□□□□ -1.95
LIMS1-214ENST00000542845 OR7C2O60412 319 aa2.88□□□□□ -1.95
LIMS1-214ENST00000542845 CST7O76096 145 aa2.88□□□□□ -1.95
LIMS1-214ENST00000542845 S100A10P60903 97 aa2.88□□□□□ -1.95
LIMS1-214ENST00000542845 NCS1P62166 190 aa2.88□□□□□ -1.95
LIMS1-214ENST00000542845 RBX1P62877 108 aa2.88□□□□□ -1.95
LIMS1-214ENST00000542845 RPL36AP83881 106 aaKnown RBP2.88□□□□□ -1.95
LIMS1-214ENST00000542845 REG3AQ06141 175 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms