RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 DAD1P61803 113 aa5.73□□□□□ -1.49
MRPL40P1-201ENST00000542687 FAM74A4Q5TZK3 123 aa5.73□□□□□ -1.49
MRPL40P1-201ENST00000542687 CFAP126Q5VTH2 177 aa5.73□□□□□ -1.49
MRPL40P1-201ENST00000542687 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.73□□□□□ -1.49
MRPL40P1-201ENST00000542687 OR4C5Q8NGB2 326 aa5.73□□□□□ -1.49
MRPL40P1-201ENST00000542687 GNB1LQ9BYB4 327 aa5.73□□□□□ -1.49
MRPL40P1-201ENST00000542687 JPT2Q9H910 190 aa5.73□□□□□ -1.49
MRPL40P1-201ENST00000542687 TRAV4A0A0B4J268 109 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 F5H697 171 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 RHODO00212 210 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 CIDEAO60543 219 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 HLA-DQA1P01909 254 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 APCSP02743 223 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 MT-ND6P03923 174 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 CRYGDP07320 174 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 RAB5AP20339 215 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 RPS10P46783 165 aaKnown RBP5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 ZFP2Q6ZN57 461 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 TMEM136Q6ZRR5 245 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 LINC00612Q8N6U2 182 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 GATD1Q8NB37 220 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 FRZBQ92765 325 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 SAMD10Q9BYL1 202 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 DPH3P1Q9H4G8 78 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 TRAPPC1Q9Y5R8 145 aa5.72□□□□□ -1.49
MRPL40P1-201ENST00000542687 IGHV3-73A0A0B4J1V6 119 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 IGHV3-53P01767 116 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 MGPP08493 103 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 FABP9Q0Z7S8 132 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 FAM104BQ5XKR9 115 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 AMN1Q8IY45 258 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 C11orf45Q8TAV5 145 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 C18orf15Q96N68 181 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 CELA1Q9UNI1 258 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 KIF25-AS1Q9Y6Z4 181 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 NBEAL2Q6ZNJ1 2754 aa5.71□□□□□ -1.5
MRPL40P1-201ENST00000542687 TRGV4A0A0C4DH28 118 aa5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 ATP5G1P05496 136 aa5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 RAB4AP20338 218 aa5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 ZNF56Q15929 161 aa5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 C12orf74Q32Q52 190 aa5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 MRPL51Q4U2R6 128 aaKnown RBP5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 POM121L12Q8N7R1 296 aa5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 RNF185Q96GF1 192 aa5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 ZNF479Q96JC4 524 aa5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 MRPL18Q9H0U6 180 aaKnown RBP5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 U3KQK5 164 aa5.7□□□□□ -1.5
MRPL40P1-201ENST00000542687 H7C1H1 209 aa5.69□□□□□ -1.5
MRPL40P1-201ENST00000542687 PPBPP02775 128 aa5.69□□□□□ -1.5
MRPL40P1-201ENST00000542687 TRGC2P03986 189 aa5.69□□□□□ -1.5
MRPL40P1-201ENST00000542687 CKS2P33552 79 aa5.69□□□□□ -1.5
MRPL40P1-201ENST00000542687 LINC00315P59091 139 aa5.69□□□□□ -1.5
MRPL40P1-201ENST00000542687 SLAQ13239 276 aa5.69□□□□□ -1.5
MRPL40P1-201ENST00000542687 UFSP1Q6NVU6 142 aa5.69□□□□□ -1.5
MRPL40P1-201ENST00000542687 MRAP2Q96G30 205 aa5.69□□□□□ -1.5
MRPL40P1-201ENST00000542687 F5H768 121 aa5.68□□□□□ -1.5
MRPL40P1-201ENST00000542687 PPP1R17O96001 155 aa5.68□□□□□ -1.5
MRPL40P1-201ENST00000542687 HTN3P15516 51 aa5.68□□□□□ -1.5
MRPL40P1-201ENST00000542687 NANOS2P60321 138 aaKnown RBP5.68□□□□□ -1.5
MRPL40P1-201ENST00000542687 FHL2Q14192 279 aa5.68□□□□□ -1.5
MRPL40P1-201ENST00000542687 KIAA1644Q3SXP7 199 aa5.68□□□□□ -1.5
MRPL40P1-201ENST00000542687 SUMO4Q6EEV6 95 aa5.68□□□□□ -1.5
MRPL40P1-201ENST00000542687 ORMDL3Q8N138 153 aa5.68□□□□□ -1.5
MRPL40P1-201ENST00000542687 HHLA3Q9XRX5 114 aa5.68□□□□□ -1.5
MRPL40P1-201ENST00000542687 TRAV26-2A0A0B4J265 109 aa5.67□□□□□ -1.5
MRPL40P1-201ENST00000542687 D6R8Y8 96 aa5.67□□□□□ -1.5
MRPL40P1-201ENST00000542687 SMKR1H3BMG3 65 aa5.67□□□□□ -1.5
MRPL40P1-201ENST00000542687 M0QY20 66 aa5.67□□□□□ -1.5
MRPL40P1-201ENST00000542687 GATA1P15976 413 aaPredicted RBP5.67□□□□□ -1.5
MRPL40P1-201ENST00000542687 Q6ZSN1 163 aa5.67□□□□□ -1.5
MRPL40P1-201ENST00000542687 Q6ZTC4 211 aa5.67□□□□□ -1.5
MRPL40P1-201ENST00000542687 PRELID3AQ96N28 172 aa5.67□□□□□ -1.5
MRPL40P1-201ENST00000542687 PRADC1Q9BSG0 188 aa5.67□□□□□ -1.5
MRPL40P1-201ENST00000542687 PRO0255Q9UI72 69 aa5.67□□□□□ -1.5
MRPL40P1-201ENST00000542687 TRAV10A0A0B4J240 114 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 TRBV10-1A0A0K0K1A3 114 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 TRBV6-4A0A1B0GX49 114 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 C1orf196B1AJZ1 125 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 K7EQD1 137 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 PAX4O43316 350 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 TNFRSF6BO95407 300 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 NCR2O95944 276 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 HOXA5P20719 270 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 SRIP30626 198 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 RHOHQ15669 191 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 OR10J3Q5JRS4 329 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 SLC25A29Q8N8R3 303 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 ALKBH7Q9BT30 221 aaPredicted RBP5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 EDA2RQ9HAV5 297 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 NIT2Q9NQR4 276 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 LAMTOR2Q9Y2Q5 125 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 TNFRSF18Q9Y5U5 241 aa5.66□□□□□ -1.5
MRPL40P1-201ENST00000542687 DNAH9Q9NYC9 4486 aa5.65□□□□□ -1.5
MRPL40P1-201ENST00000542687 DEFB131BA0A096LNP1 70 aa5.65□□□□□ -1.5
MRPL40P1-201ENST00000542687 PHOX2AO14813 284 aa5.65□□□□□ -1.5
MRPL40P1-201ENST00000542687 GAS8-AS1O95177 125 aa5.65□□□□□ -1.5
MRPL40P1-201ENST00000542687 P0DMU3 169 aa5.65□□□□□ -1.5
MRPL40P1-201ENST00000542687 FAM231AP0DMU4 169 aa5.65□□□□□ -1.5
MRPL40P1-201ENST00000542687 FAM231CP0DMU5 169 aa5.65□□□□□ -1.5
MRPL40P1-201ENST00000542687 CRYBA4P53673 196 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms