RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ACACBO00763 2458 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 UBR5O95071 2799 aaPredicted RBP4.87□□□□□ -1.63
PTPRO-208ENST00000542557 TRBV25-1A0A075B6N4 114 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 TRAV12-3A0A0B4J271 114 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 IGHV3-16A0A0C4DH30 117 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 CD7P09564 240 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 SYNJ2BPP57105 145 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 AMMECR1LQ6DCA0 310 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 ERASQ7Z444 233 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 Q8N2B8 174 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 CSTL1Q9H114 145 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 ANKRD17O75179 2603 aaKnown RBP4.87□□□□□ -1.63
PTPRO-208ENST00000542557 MUC4Q99102 2169 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 TRBV6-5A0A0K0K1A5 114 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 LINC01619G3V211 115 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 HOXD3P31249 432 aaPredicted RBP4.87□□□□□ -1.63
PTPRO-208ENST00000542557 POLR2KP53803 58 aaKnown RBP4.87□□□□□ -1.63
PTPRO-208ENST00000542557 TAL2Q16559 108 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 SUMO4Q6EEV6 95 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 FOXI2Q6ZQN5 318 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 SYT8Q8NBV8 401 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 SELENOKQ9Y6D0 94 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 FBN2P35556 2912 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 USP24Q9UPU5 2620 aa4.87□□□□□ -1.63
PTPRO-208ENST00000542557 PRRC2AP48634 2157 aaKnown RBP4.87□□□□□ -1.63
PTPRO-208ENST00000542557 BAALCQ8WXS3 180 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 TM2D2Q9BX73 214 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 CR1P17927 2039 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 CSPG4Q6UVK1 2322 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 IGHV1OR15-1A0A075B7D0 117 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 TRAV2A0A0B4J234 112 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 A0A0U1RRA0 63 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 HOXA3O43365 443 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-208ENST00000542557 PRB1P04280 392 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 RIPPLY3P57055 190 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 FHL3Q13643 280 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 DEFB113Q30KQ7 82 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 C5orf47Q569G3 176 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 MAPK1IP1LQ8NDC0 245 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 BBC3Q96PG8 261 aaPredicted RBP4.86□□□□□ -1.63
PTPRO-208ENST00000542557 TTTY13Q9BZ97 58 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 CYSLTR1Q9Y271 337 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 TRBV27A0A0K0K1C4 114 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 A8MTW9 85 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 VCYO14598 125 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 UFSP1Q6NVU6 142 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 AMTNQ6UX39 209 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 GTF2H5Q6ZYL4 71 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 ZNF843Q8N446 348 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 JMJD8Q96S16 334 aa4.86□□□□□ -1.63
PTPRO-208ENST00000542557 CRYBG3Q68DQ2 2970 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 TRGV11A0A075B6L2 103 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 GHRHP01286 108 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 ZFP2Q6ZN57 461 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 CEND1Q8N111 149 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 TMEM141Q96I45 108 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 TIMM17AQ99595 171 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 KIR2DL4Q99706 377 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 PEMTQ9UBM1 199 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 ZNF256Q9Y2P7 627 aaPredicted RBP4.85□□□□□ -1.63
PTPRO-208ENST00000542557 UTP20O75691 2785 aaKnown RBP4.85□□□□□ -1.63
PTPRO-208ENST00000542557 OR11H12B2RN74 326 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 E9PLD3 99 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 K7EP34 96 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 SMIM13P0DJ93 91 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 GCSHP23434 173 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 FXYD2P54710 66 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 PAPPA-AS1Q5QFB9 102 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 OR11H1Q8NG94 326 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 OR11H2Q8NH07 326 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 JPT2Q9H910 190 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 CSMD2Q7Z408 3487 aa4.85□□□□□ -1.63
PTPRO-208ENST00000542557 ZNF462Q96JM2 2506 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 TRAV12-2A0A075B6T6 113 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 SDHAF1A6NFY7 115 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 IGIPA6NJ69 53 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 H3BUT2 72 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 SPINK13Q1W4C9 94 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 TCTEX1D4Q5JR98 221 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 MAPKAPK5-AS1Q8N8E1 139 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 EDA2RQ9HAV5 297 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 MDFICQ9P1T7 246 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 TP53TG1Q9Y2A0 90 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 USP9YO00507 2555 aaPredicted RBP4.84□□□□□ -1.63
PTPRO-208ENST00000542557 MAP1AP78559 2803 aaPredicted RBP4.84□□□□□ -1.63
PTPRO-208ENST00000542557 MYMXA0A1B0GTQ4 84 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 A0A1W2PPM0 123 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 CRYGDP07320 174 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 KRTAP10-9P60411 292 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 RHOHQ15669 191 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 NSUN5P1Q3KNT7 163 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 TRPT1Q86TN4 253 aaKnown RBP4.84□□□□□ -1.63
PTPRO-208ENST00000542557 TMEM86BQ8N661 226 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 X6R8D5 127 aa4.84□□□□□ -1.63
PTPRO-208ENST00000542557 F5H697 171 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 M0QY20 66 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 TSHBP01222 138 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 IGKV3-20P01619 116 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 PMVKQ15126 192 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 MORN3Q6PF18 240 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms