RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 DEFB1P60022 68 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 EIF5AP63241 154 aaKnown RBP3.38□□□□□ -1.87
C12orf56-205ENST00000542397 UBE2L3P68036 154 aaKnown RBP3.38□□□□□ -1.87
C12orf56-205ENST00000542397 SOHLH1Q5JUK2 328 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 ZNF705AQ6ZN79 300 aaPredicted RBP3.38□□□□□ -1.87
C12orf56-205ENST00000542397 ZFP82Q8N141 532 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 RNF182Q8N6D2 247 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 ZNF738Q8NE65 137 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 OR2D3Q8NGH3 330 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 OR10G4Q8NGN3 311 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 OR10G9Q8NGN4 311 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 STOML3Q8TAV4 291 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 RPUSD4Q96CM3 377 aaKnown RBP3.38□□□□□ -1.87
C12orf56-205ENST00000542397 PHYHIPLQ96FC7 376 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 HYLS1Q96M11 299 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 MAP1LC3CQ9BXW4 147 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 SH3BGRL3Q9H299 93 aa3.38□□□□□ -1.87
C12orf56-205ENST00000542397 C11orf68Q9H3H3 251 aaKnown RBP3.38□□□□□ -1.87
C12orf56-205ENST00000542397 IGKV3D-20A0A0C4DH25 116 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 CTXND1A0A1B0GTU2 59 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 A0A1B0GVG6 124 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 KANTRA0A1W2PQU2 76 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 RBAKDNA6NC62 111 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 SMIM9A6NGZ8 99 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 ZNF705FA8MVS1 300 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 UMAD1C9J7I0 102 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 M0R3E3 92 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 CRXO43186 299 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 SLC25A5P05141 298 aaKnown RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 OR10J4P0C629 311 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 ZNF705DP0CH99 300 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 ZNF705BP0CI00 300 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 RBMY1A1P0DJD3 496 aaKnown RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 ARL14EPLP0DKL9 152 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 MIFP14174 115 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 GATA1P15976 413 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 NKX2-5P52952 324 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 HIST1H1AQ02539 215 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 ZNF726P1Q15940 193 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 LGALSLQ3ZCW2 172 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 AKR1C8PQ5T2L2 129 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 Q8NAQ8 132 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 OR4B1Q8NGF8 309 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 OR10J6PQ8NGY7 276 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 OR11H2Q8NH07 326 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 BLNKQ8WV28 456 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 IGF2BP2-AS1Q96M15 143 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 ZNF471Q9BX82 626 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 ACTR3CQ9C0K3 210 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-205ENST00000542397 OTORQ9NRC9 128 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 TMEM167BQ9NRX6 74 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 XCL2Q9UBD3 114 aa3.37□□□□□ -1.87
C12orf56-205ENST00000542397 IGLV8-61A0A075B6I0 122 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 A0A1W2PRE2 83 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 PFDN1O60925 122 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 CXorf1O96002 111 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 NMBP08949 121 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 TPT1P13693 172 aaKnown RBP3.36□□□□□ -1.87
C12orf56-205ENST00000542397 CRISP2P16562 243 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 GCHFRP30047 84 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 TSPOP30536 169 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 Q1RN00 199 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 HIGD2BQ4VC39 106 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 DPPA3Q6W0C5 159 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 Q6ZN92 141 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 SSX7Q7RTT5 188 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 BAP18Q8IXM2 172 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 C1orf158Q8N1D5 194 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 TMEM256Q8N2U0 113 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 EXOC3-AS1Q8N2X6 119 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 C9orf62Q8N4C0 152 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 RXFP4Q8TDU9 374 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 MBD3L1Q8WWY6 194 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 FAM19A4Q96LR4 140 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 LINC00477Q96M19 166 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 RARRES2Q99969 163 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 C20orf144Q9BQM9 153 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 SLC35B3Q9H1N7 401 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 Q9H3A6 140 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 GOLT1BQ9Y3E0 138 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 LENEPQ9Y5L5 61 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 ARL2-SNX15V9GYD0 113 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 DNAH2Q9P225 4427 aa3.36□□□□□ -1.87
C12orf56-205ENST00000542397 FAT2Q9NYQ8 4349 aa3.35□□□□□ -1.87
C12orf56-205ENST00000542397 IGKV2-40A0A087WW87 121 aaPredicted RBP3.35□□□□□ -1.87
C12orf56-205ENST00000542397 TMEM189A5PLL7 270 aa3.35□□□□□ -1.87
C12orf56-205ENST00000542397 MAP1LC3B2A6NCE7 125 aa3.35□□□□□ -1.87
C12orf56-205ENST00000542397 KLLNB2CW77 178 aa3.35□□□□□ -1.87
C12orf56-205ENST00000542397 M0QXV9 152 aa3.35□□□□□ -1.87
C12orf56-205ENST00000542397 M0R2Z0 102 aa3.35□□□□□ -1.87
C12orf56-205ENST00000542397 HMGB3O15347 200 aaKnown RBP3.35□□□□□ -1.87
C12orf56-205ENST00000542397 EIF3GO75821 320 aaKnown RBP eCLIP3.35□□□□□ -1.87
C12orf56-205ENST00000542397 INSP01308 110 aa3.35□□□□□ -1.87
C12orf56-205ENST00000542397 IGKV2D-40P01614 121 aaPredicted RBP3.35□□□□□ -1.87
C12orf56-205ENST00000542397 CSN1S1P47710 185 aa3.35□□□□□ -1.87
C12orf56-205ENST00000542397 RAB5CP51148 216 aa3.35□□□□□ -1.87
C12orf56-205ENST00000542397 RANP62826 216 aaKnown RBP3.35□□□□□ -1.87
C12orf56-205ENST00000542397 SPINK13Q1W4C9 94 aa3.35□□□□□ -1.87
C12orf56-205ENST00000542397 FAM74A1Q5RGS3 127 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms