RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 DUSP14O95147 198 aaKnown RBP3.87□□□□□ -1.79
CPSF7-220ENST00000541963 HLA-DRB4P13762 266 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 MIFP14174 115 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 HNRNPA3P51991 378 aaKnown RBP3.87□□□□□ -1.79
CPSF7-220ENST00000541963 Q0VG73 95 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 OR10J3Q5JRS4 329 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 MRPL54Q6P161 138 aaKnown RBP3.87□□□□□ -1.79
CPSF7-220ENST00000541963 TMEM252Q8N6L7 170 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 RPUSD4Q96CM3 377 aaKnown RBP3.87□□□□□ -1.79
CPSF7-220ENST00000541963 VPS25Q9BRG1 176 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 SHANK2-AS3Q9BTD1 123 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 KCNIP2Q9NS61 270 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 CLEC5AQ9NY25 188 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 FUT9Q9Y231 359 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 LAMTOR2Q9Y2Q5 125 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 KLK5Q9Y337 293 aaPredicted RBP3.87□□□□□ -1.79
CPSF7-220ENST00000541963 LY96Q9Y6Y9 160 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 ARL2-SNX15V9GYD0 113 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 HLA-DRB4X5D2U9 266 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 SMIM9A6NGZ8 99 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 H3BRN7 92 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 SMIM17P0DL12 118 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 NDUFV3P56181 108 aaKnown RBP3.86□□□□□ -1.79
CPSF7-220ENST00000541963 PSG9Q00887 426 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 C10orf113Q5VZT2 155 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 RASL11AQ6T310 242 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 LINC00305Q7Z4B0 112 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 BPIFA4PQ86YQ2 179 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 ZNF709Q8N972 641 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 C11orf52Q96A22 123 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 SMIM3Q9BZL3 60 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 C11orf68Q9H3H3 251 aaKnown RBP3.86□□□□□ -1.79
CPSF7-220ENST00000541963 C11orf1Q9H5F2 150 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 JPT2Q9H910 190 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 GNG13Q9P2W3 67 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 TRAPPC1Q9Y5R8 145 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 PXMP4Q9Y6I8 212 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 COL7A1Q02388 2944 aa3.86□□□□□ -1.79
CPSF7-220ENST00000541963 A0A0U1RRA0 63 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 CTXND1A0A1B0GTU2 59 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 UBE2L5PA0A1B0GUS4 154 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 A0A1B0GV72 72 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 IGSF23A1L1A6 192 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 TMEM189A5PLL7 270 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 J3QR89 54 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 ZNF253O75346 499 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 STAG3L3P0CL85 134 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 CRISP2P16562 243 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 RHOBP62745 196 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 ADIRFQ15847 76 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 C14orf177Q52M58 125 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 FAM78BQ5VT40 261 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 CEMP1Q6PRD7 247 aaPredicted RBP3.85□□□□□ -1.79
CPSF7-220ENST00000541963 LCN15Q6UWW0 184 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 PATE2Q6UY27 113 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 GTF2H5Q6ZYL4 71 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 OR5C1Q8NGR4 320 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 MGST2Q99735 147 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 SLC50A1Q9BRV3 221 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 SAMD10Q9BYL1 202 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 OCR1Q9BZK8 76 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 SH3BGRL3Q9H299 93 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 SPANXA1Q9NS26 97 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 SLC39A9Q9NUM3 307 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 XCL2Q9UBD3 114 aa3.85□□□□□ -1.79
CPSF7-220ENST00000541963 A0A0J9YX75 114 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 LCE6AA0A183 80 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 TMEM238C9JI98 176 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 C11orf94C9JXX5 98 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 GIG44P09565 113 aaPredicted RBP3.84□□□□□ -1.79
CPSF7-220ENST00000541963 NBEAP1P0C6P0 100 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 TCTAP57738 103 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 RPL23P62829 140 aaKnown RBP3.84□□□□□ -1.79
CPSF7-220ENST00000541963 OCIAD2Q56VL3 154 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 MIC13Q5XKP0 118 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 FAM159AQ6UWV7 190 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 CSNK1G2-AS1Q8NCQ2 148 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 BORCS7Q96B45 105 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 VGLL1Q99990 258 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 GNB1LQ9BYB4 327 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 Q9HAA7 133 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 ST20Q9HBF5 79 aa3.84□□□□□ -1.79
CPSF7-220ENST00000541963 IGHV3OR16-12A0A075B7B8 117 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 TRAV8-2A0A0B4J237 113 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 TEX48A0A1B0GUV7 120 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 SERTM2A0A1B0GWG4 89 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 C9JCJ5 164 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 F6UB75 175 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 DEFB4AO15263 64 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 INSP01308 110 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 HLA-DQA1P01909 254 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 SPART-AS1P0CW21 52 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 IGLC2P0DOY2 106 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 IGLC3P0DOY3 106 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 HIST1H1EP10412 219 aaKnown RBP3.83□□□□□ -1.8
CPSF7-220ENST00000541963 PMCHP20382 165 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 TSPOP30536 169 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms