RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 OR11H12B2RN74 326 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 ZNF688P0C7X2 276 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 FXYD2P54710 66 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 SPTAN1Q13813 2472 aaKnown RBP7.35□□□□□ -1.23
LMO3-227ENST00000541764 RHOHQ15669 191 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 C10orf99Q6UWK7 81 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 MAPKAPK5-AS1Q8N8E1 139 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 OR11H1Q8NG94 326 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 OR11H2Q8NH07 326 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 PTH2Q96A98 100 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 KIR2DL4Q99706 377 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 CST9LQ9H4G1 147 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 PIEZO1Q92508 2521 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 TRGV11A0A075B6L2 103 aa7.34□□□□□ -1.23
LMO3-227ENST00000541764 TRBV7-3A0A075B6L6 115 aa7.34□□□□□ -1.23
LMO3-227ENST00000541764 MYMXA0A1B0GTQ4 84 aa7.34□□□□□ -1.23
LMO3-227ENST00000541764 H3BUT2 72 aa7.34□□□□□ -1.23
LMO3-227ENST00000541764 SPRY2O43597 315 aa7.34□□□□□ -1.23
LMO3-227ENST00000541764 CRYGDP07320 174 aa7.34□□□□□ -1.23
LMO3-227ENST00000541764 HOXD3P31249 432 aaPredicted RBP7.34□□□□□ -1.23
LMO3-227ENST00000541764 SYNJ2BPP57105 145 aa7.34□□□□□ -1.23
LMO3-227ENST00000541764 ZFP2Q6ZN57 461 aa7.34□□□□□ -1.23
LMO3-227ENST00000541764 NRGNQ92686 78 aa7.34□□□□□ -1.23
LMO3-227ENST00000541764 MUC4Q99102 2169 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 M0QY20 66 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 TSHBP01222 138 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 GCSHP23434 173 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 TCTAP57738 103 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 NSUN5P1Q3KNT7 163 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 OCIAD2Q56VL3 154 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 Q8N1Y9 231 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 TMEM86BQ8N661 226 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 WFDC12Q8WWY7 111 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 TTTY13Q9BZ97 58 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 CFAP46Q8IYW2 2715 aa7.33□□□□□ -1.24
LMO3-227ENST00000541764 SDHAF1A6NFY7 115 aa7.32□□□□□ -1.24
LMO3-227ENST00000541764 FABP2P12104 132 aa7.32□□□□□ -1.24
LMO3-227ENST00000541764 PMVKQ15126 192 aa7.32□□□□□ -1.24
LMO3-227ENST00000541764 Q5PR19 223 aa7.32□□□□□ -1.24
LMO3-227ENST00000541764 SAMD5Q5TGI4 173 aa7.32□□□□□ -1.24
LMO3-227ENST00000541764 TRPT1Q86TN4 253 aaKnown RBP7.32□□□□□ -1.24
LMO3-227ENST00000541764 SPAG8Q99932 426 aaPredicted RBP7.32□□□□□ -1.24
LMO3-227ENST00000541764 LINC00467Q9BRT7 94 aa7.32□□□□□ -1.24
LMO3-227ENST00000541764 IGLV4-69A0A075B6H9 119 aa7.31□□□□□ -1.24
LMO3-227ENST00000541764 DEFB113Q30KQ7 82 aa7.31□□□□□ -1.24
LMO3-227ENST00000541764 MORN3Q6PF18 240 aaPredicted RBP7.31□□□□□ -1.24
LMO3-227ENST00000541764 TEX29Q8N6K0 151 aa7.31□□□□□ -1.24
LMO3-227ENST00000541764 CLUHP3Q96NS8 147 aa7.31□□□□□ -1.24
LMO3-227ENST00000541764 JPT2Q9H910 190 aa7.31□□□□□ -1.24
LMO3-227ENST00000541764 MDFICQ9P1T7 246 aa7.31□□□□□ -1.24
LMO3-227ENST00000541764 TP53TG1Q9Y2A0 90 aa7.31□□□□□ -1.24
LMO3-227ENST00000541764 SPCS1Q9Y6A9 102 aa7.31□□□□□ -1.24
LMO3-227ENST00000541764 PRRC2AP48634 2157 aaKnown RBP7.31□□□□□ -1.24
LMO3-227ENST00000541764 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 K7ERU9 68 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 HOXA3O43365 443 aaPredicted RBP7.3□□□□□ -1.24
LMO3-227ENST00000541764 HERVK_113P61574 105 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 ZNF876PQ49A33 203 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 TCTEX1D4Q5JR98 221 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 NFE4Q86UQ8 179 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 PRADC1Q9BSG0 188 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 KRTAP9-9Q9BYP9 154 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 KRTAP9-4Q9BYQ2 154 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 SVEP1Q4LDE5 3571 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 USP9XQ93008 2570 aaPredicted RBP7.3□□□□□ -1.24
LMO3-227ENST00000541764 A0A087WWL8 130 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 F5H697 171 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 CRYBA4P53673 196 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 SPINK13Q1W4C9 94 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 C12orf74Q32Q52 190 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 NEGR1Q7Z3B1 354 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 C4orf3Q8WVX3 66 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 RAB37Q96AX2 223 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 PEMTQ9UBM1 199 aa7.3□□□□□ -1.24
LMO3-227ENST00000541764 TRAV12-2A0A075B6T6 113 aa7.29□□□□□ -1.24
LMO3-227ENST00000541764 IGLL5B9A064 214 aa7.29□□□□□ -1.24
LMO3-227ENST00000541764 H3BMM0 161 aa7.29□□□□□ -1.24
LMO3-227ENST00000541764 ZNF843Q8N446 348 aa7.29□□□□□ -1.24
LMO3-227ENST00000541764 HIST1H4GQ99525 98 aa7.29□□□□□ -1.24
LMO3-227ENST00000541764 NHP2Q9NX24 153 aaKnown RBP7.29□□□□□ -1.24
LMO3-227ENST00000541764 IGSF10Q6WRI0 2623 aa7.28□□□□□ -1.24
LMO3-227ENST00000541764 I3L3M4 83 aa7.28□□□□□ -1.24
LMO3-227ENST00000541764 C20orf203Q8NBC4 194 aa7.28□□□□□ -1.24
LMO3-227ENST00000541764 BBC3Q96PG8 261 aaPredicted RBP7.28□□□□□ -1.24
LMO3-227ENST00000541764 SPANXB1Q9NS25 103 aaPredicted RBP7.28□□□□□ -1.24
LMO3-227ENST00000541764 PYGO1Q9Y3Y4 419 aa7.28□□□□□ -1.24
LMO3-227ENST00000541764 SPG11Q96JI7 2443 aa7.28□□□□□ -1.24
LMO3-227ENST00000541764 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 TMEM238LA0A1B0GVL6 79 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 A8MWV9 139 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 P0DMU3 169 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 FAM231AP0DMU4 169 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 FAM231CP0DMU5 169 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 ZNF56Q15929 161 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 RRN3P1Q2M238 152 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 MAPK1IP1LQ8NDC0 245 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 DLX4Q92988 240 aaPredicted RBP7.27□□□□□ -1.25
LMO3-227ENST00000541764 SELENOKQ9Y6D0 94 aa7.27□□□□□ -1.25
LMO3-227ENST00000541764 CSPG4Q6UVK1 2322 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms