RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 PCNPQ8WW12 178 aaKnown RBP3.94□□□□□ -1.78
SUDS3-202ENST00000541280 CYTL1Q9NRR1 136 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 RPH3ALQ9UNE2 315 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 LINC00588Q9Y4M8 146 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 ICOSQ9Y6W8 199 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 DNAH7Q8WXX0 4024 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 IGHV3-16A0A0C4DH30 117 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 A0A0J9YY99 117 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 TRBV6-1A0A0K0K1D8 114 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 NBDYA0A0U1RRE5 68 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 C9JCJ5 164 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 M0R2N4 97 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 CRYBA4P53673 196 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 ESRGQ1W209 222 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 MUC21Q5SSG8 566 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 COX8CQ7Z4L0 72 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 PRNTQ86SH4 94 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 C6orf223Q8N319 242 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 OR4C5Q8NGB2 326 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 MBD3L1Q8WWY6 194 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 TVP23CQ96ET8 276 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 FMC1Q96HJ9 113 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 VSIG2Q96IQ7 327 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 OPRPNQ99935 248 aaPredicted RBP3.93□□□□□ -1.78
SUDS3-202ENST00000541280 TXNDC17Q9BRA2 123 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 NAGKQ9UJ70 344 aa3.93□□□□□ -1.78
SUDS3-202ENST00000541280 MRPS16Q9Y3D3 137 aaKnown RBP3.93□□□□□ -1.78
SUDS3-202ENST00000541280 IGLV2-18A0A075B6J9 118 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 A0A096LPF7 62 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 TRAV8-1A0A0A6YYK1 113 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 MAP1LC3B2A6NCE7 125 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 FAM74A7A6NL05 159 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 GGTLC3B5MD39 225 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 G3V3Q6 166 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 PEX7O00628 323 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 BCL2L11O43521 198 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 GNRH2O43555 120 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 PAGE4O60829 102 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 PFDN1O60925 122 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 GCGP01275 180 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 TPT1P13693 172 aaKnown RBP3.92□□□□□ -1.78
SUDS3-202ENST00000541280 S100A4P26447 101 aaKnown RBP3.92□□□□□ -1.78
SUDS3-202ENST00000541280 SRIP30626 198 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 UBE2G1P62253 170 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 GNG5P63218 68 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 ZNF726P1Q15940 193 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 SFT2D1Q8WV19 159 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 PRADC1Q9BSG0 188 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 ZNF471Q9BX82 626 aaPredicted RBP3.92□□□□□ -1.78
SUDS3-202ENST00000541280 MAP1LC3BQ9GZQ8 125 aa3.92□□□□□ -1.78
SUDS3-202ENST00000541280 MRPL16Q9NX20 251 aaKnown RBP3.92□□□□□ -1.78
SUDS3-202ENST00000541280 STARD9Q9P2P6 4700 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 TRAV1-1A0A0B4J248 108 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 TRBV6-4A0A1B0GX49 114 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 A8MWV9 139 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 RTL8CO15255 209 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 SIVA1O15304 175 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 EIF3GO75821 320 aaKnown RBP eCLIP3.91□□□□□ -1.78
SUDS3-202ENST00000541280 IGHV3-53P01767 116 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 TYMSP04818 313 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 MGST1P10620 155 aaKnown RBP3.91□□□□□ -1.78
SUDS3-202ENST00000541280 ASIPP42127 132 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 DNLZQ5SXM8 178 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 FAM162BQ5T6X4 162 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 CST9LP1Q5W188 147 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 LYPD5Q6UWN5 251 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 ZFP2Q6ZN57 461 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 Q6ZQT7 251 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 TMUB2Q71RG4 321 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 TCTE3Q8IZS6 198 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 C9orf85Q96MD7 179 aa3.91□□□□□ -1.78
SUDS3-202ENST00000541280 CSMD3Q7Z407 3707 aa3.9□□□□□ -1.78
SUDS3-202ENST00000541280 K7EQD1 137 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 RS1O15537 224 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 LTAP01374 205 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 EVI2AP22794 236 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 TAGLN2P37802 199 aaKnown RBP3.9□□□□□ -1.79
SUDS3-202ENST00000541280 ZNF80P51504 273 aaPredicted RBP3.9□□□□□ -1.79
SUDS3-202ENST00000541280 FGF8P55075 233 aaPredicted RBP3.9□□□□□ -1.79
SUDS3-202ENST00000541280 UBE2G2P60604 165 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 KIAA1644Q3SXP7 199 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 C10orf126Q8N4M7 172 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 OR11H4Q8NGC9 324 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 FAM213BQ8TBF2 198 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 SGK494Q96LW2 274 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 LINC00479Q96M42 142 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 MANBALQ9NQG1 85 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 IL36BQ9NZH7 164 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 RYR3Q15413 4870 aa3.9□□□□□ -1.79
SUDS3-202ENST00000541280 TRAV8-6A0A0B4J262 113 aa3.89□□□□□ -1.79
SUDS3-202ENST00000541280 TRAV34A0A0B4J273 112 aa3.89□□□□□ -1.79
SUDS3-202ENST00000541280 B4DEV8 164 aa3.89□□□□□ -1.79
SUDS3-202ENST00000541280 KRBOX1C9JBD0 128 aa3.89□□□□□ -1.79
SUDS3-202ENST00000541280 SMLR1H3BR10 107 aa3.89□□□□□ -1.79
SUDS3-202ENST00000541280 NXPH4O95158 308 aa3.89□□□□□ -1.79
SUDS3-202ENST00000541280 C1QBP02746 253 aa3.89□□□□□ -1.79
SUDS3-202ENST00000541280 CXCL1P09341 107 aa3.89□□□□□ -1.79
SUDS3-202ENST00000541280 SFTA3P0C7M3 94 aa3.89□□□□□ -1.79
SUDS3-202ENST00000541280 RNASE3P12724 160 aaKnown RBP3.89□□□□□ -1.79
SUDS3-202ENST00000541280 GATA1P15976 413 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms