RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 RNASEKQ6P5S7 137 aaKnown RBP6.15□□□□□ -1.42
CHD4-208ENST00000540960 NIT1Q86X76 327 aa6.15□□□□□ -1.42
CHD4-208ENST00000540960 TMEM61Q8N0U2 210 aa6.15□□□□□ -1.42
CHD4-208ENST00000540960 DEFB125Q8N687 156 aa6.15□□□□□ -1.42
CHD4-208ENST00000540960 PTH2Q96A98 100 aa6.15□□□□□ -1.42
CHD4-208ENST00000540960 C1QTNF4Q9BXJ3 329 aa6.15□□□□□ -1.42
CHD4-208ENST00000540960 SCRT2Q9NQ03 307 aa6.15□□□□□ -1.42
CHD4-208ENST00000540960 NIT2Q9NQR4 276 aa6.15□□□□□ -1.42
CHD4-208ENST00000540960 AP5S1Q9NUS5 200 aa6.15□□□□□ -1.42
CHD4-208ENST00000540960 TP53TG3Q9ULZ0 132 aa6.15□□□□□ -1.42
CHD4-208ENST00000540960 FAT2Q9NYQ8 4349 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 M0R2Z0 102 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 M0R381 172 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 NXPH4O95158 308 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 INSP01308 110 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 PMCHL1Q16048 86 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 ANXA2RQ3ZCQ2 193 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 CD300EQ496F6 205 aaPredicted RBP6.14□□□□□ -1.43
CHD4-208ENST00000540960 MORN3Q6PF18 240 aaPredicted RBP6.14□□□□□ -1.43
CHD4-208ENST00000540960 STHQ8IWL8 128 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 OR10AG1Q8NH19 301 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 C20orf78Q9BR46 151 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 DPH3P1Q9H4G8 78 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 GSN-AS1Q9NRJ2 163 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 DNAH11Q96DT5 4516 aa6.14□□□□□ -1.43
CHD4-208ENST00000540960 IFITM10A6NMD0 228 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 PRSS47A8MTI9 375 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 F6UB75 175 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 TSTD3H0UI37 97 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 H3BVH4 76 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 SAP30O75446 220 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 SCGB1D1O95968 90 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 CD7P09564 240 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 ZNF705DP0CH99 300 aaPredicted RBP6.13□□□□□ -1.43
CHD4-208ENST00000540960 ZNF705BP0CI00 300 aaPredicted RBP6.13□□□□□ -1.43
CHD4-208ENST00000540960 MRPL51Q4U2R6 128 aaKnown RBP6.13□□□□□ -1.43
CHD4-208ENST00000540960 MAPKAPK5-AS1Q8N8E1 139 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 SPXQ9BT56 116 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 MAP6D1Q9H9H5 199 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 DNAH2Q9P225 4427 aa6.13□□□□□ -1.43
CHD4-208ENST00000540960 TRAV12-3A0A0B4J271 114 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 D6R8Y8 96 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 H7C1H1 209 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 LEPROTL1O95214 131 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 IGLV1-51P01701 117 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 BTF3P20290 206 aaKnown RBP6.12□□□□□ -1.43
CHD4-208ENST00000540960 ZNF415Q09FC8 603 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 C4orf48Q5BLP8 95 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 C9orf66Q5T8R8 295 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 AMTNQ6UX39 209 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 AMN1Q8IY45 258 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 IL17DQ8TAD2 202 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 MAP1LC3CQ9BXW4 147 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 C11orf21Q9P2W6 132 aa6.12□□□□□ -1.43
CHD4-208ENST00000540960 SRRM2Q9UQ35 2752 aaKnown RBP6.12□□□□□ -1.43
CHD4-208ENST00000540960 PKD1P98161 4303 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 CBY3A6NI87 242 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 A8MWV9 139 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 J3KRW8 73 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 CIDEAO60543 219 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 RPL32P62910 135 aaKnown RBP6.11□□□□□ -1.43
CHD4-208ENST00000540960 SPINK13Q1W4C9 94 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 PYY3Q5JQD4 70 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 MUC21Q5SSG8 566 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 PRR9Q5T870 116 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 GTSCR1Q86UQ5 136 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 RETNQ9HD89 108 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 GOLT1BQ9Y3E0 138 aa6.11□□□□□ -1.43
CHD4-208ENST00000540960 IGHV3-16A0A0C4DH30 117 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 LINC01546A6NGU7 62 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 RHODO00212 210 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 TNFRSF6BO95407 300 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 IGKV3-20P01619 116 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 HBDP02042 147 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 KRTDAPP60985 99 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 PKIAP61925 76 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 ORMDL2Q53FV1 153 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 PET117Q6UWS5 81 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 ZNF575Q86XF7 245 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 POM121L12Q8N7R1 296 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 Q8N8P6 123 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 C9orf85Q96MD7 179 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 TMEM208Q9BTX3 173 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 TMEM70Q9BUB7 260 aa6.1□□□□□ -1.43
CHD4-208ENST00000540960 TIMM8BQ9Y5J9 83 aaPredicted RBP6.1□□□□□ -1.43
CHD4-208ENST00000540960 KNCNA6PVL3 124 aa6.09□□□□□ -1.43
CHD4-208ENST00000540960 HSBP1L1C9JCN9 74 aa6.09□□□□□ -1.43
CHD4-208ENST00000540960 M0R2P5 195 aa6.09□□□□□ -1.43
CHD4-208ENST00000540960 ATP5LO75964 103 aa6.09□□□□□ -1.43
CHD4-208ENST00000540960 RNASE3P12724 160 aaKnown RBP6.09□□□□□ -1.43
CHD4-208ENST00000540960 EDN2P20800 178 aa6.09□□□□□ -1.43
CHD4-208ENST00000540960 EVI2AP22794 236 aa6.09□□□□□ -1.43
CHD4-208ENST00000540960 SPATA12Q7Z6I5 190 aa6.09□□□□□ -1.43
CHD4-208ENST00000540960 RNF185Q96GF1 192 aa6.09□□□□□ -1.43
CHD4-208ENST00000540960 LINC01587Q99440 93 aa6.09□□□□□ -1.43
CHD4-208ENST00000540960 SPATA25Q9BR10 227 aa6.09□□□□□ -1.43
CHD4-208ENST00000540960 CRXO43186 299 aaPredicted RBP6.08□□□□□ -1.44
CHD4-208ENST00000540960 GNRH2O43555 120 aa6.08□□□□□ -1.44
CHD4-208ENST00000540960 RBMY1A1P0DJD3 496 aaKnown RBP6.08□□□□□ -1.44
CHD4-208ENST00000540960 IGHV4-30-4P0DP06 118 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms