RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 ZNF815PA8K554 130 aa10.6□□□□□ -0.71
INO80E-203ENST00000540562 C11orf44Q8N8P7 122 aa10.6□□□□□ -0.71
INO80E-203ENST00000540562 ZNF479Q96JC4 524 aa10.6□□□□□ -0.71
INO80E-203ENST00000540562 DAZ1Q9NQZ3 744 aaKnown RBP10.6□□□□□ -0.71
INO80E-203ENST00000540562 NDUFA4O00483 81 aa10.6□□□□□ -0.71
INO80E-203ENST00000540562 COTL1Q14019 142 aa10.6□□□□□ -0.71
INO80E-203ENST00000540562 BAALCQ8WXS3 180 aa10.6□□□□□ -0.71
INO80E-203ENST00000540562 F8VRH5 84 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 H7C2G1 150 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 DEFB112Q30KQ8 113 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 ETDBQ3ZM63 59 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 ZMAT4Q9H898 229 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 LOC107984156A0A0G2JMH3 177 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 MSMBP08118 114 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 ARL17AQ8IVW1 177 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 USP24Q9UPU5 2620 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 H7C1H1 209 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 TMEM190Q8WZ59 177 aa10.59□□□□□ -0.71
INO80E-203ENST00000540562 SOCS3O14543 225 aa10.58□□□□□ -0.72
INO80E-203ENST00000540562 C18orf65Q6ZTR6 163 aa10.58□□□□□ -0.72
INO80E-203ENST00000540562 C10orf105Q8TEF2 133 aa10.58□□□□□ -0.72
INO80E-203ENST00000540562 AKAP9Q99996 3911 aa10.58□□□□□ -0.72
INO80E-203ENST00000540562 P0DMU3 169 aa10.58□□□□□ -0.72
INO80E-203ENST00000540562 FAM231AP0DMU4 169 aa10.58□□□□□ -0.72
INO80E-203ENST00000540562 FAM231CP0DMU5 169 aa10.58□□□□□ -0.72
INO80E-203ENST00000540562 C12orf74Q32Q52 190 aa10.58□□□□□ -0.72
INO80E-203ENST00000540562 SUMO4Q6EEV6 95 aa10.58□□□□□ -0.72
INO80E-203ENST00000540562 BEX4Q9NWD9 120 aaPredicted RBP10.58□□□□□ -0.72
INO80E-203ENST00000540562 NBPF19A0A087WUL8 3843 aa10.57□□□□□ -0.72
INO80E-203ENST00000540562 OVOL1O14753 267 aa10.57□□□□□ -0.72
INO80E-203ENST00000540562 C11orf86A6NJI1 115 aa10.57□□□□□ -0.72
INO80E-203ENST00000540562 ADARB2-AS1A8MUL3 147 aa10.57□□□□□ -0.72
INO80E-203ENST00000540562 IGHG2P01859 326 aa10.57□□□□□ -0.72
INO80E-203ENST00000540562 GTSF1LQ9H1H1 148 aa10.57□□□□□ -0.72
INO80E-203ENST00000540562 INSL3P51460 131 aa10.56□□□□□ -0.72
INO80E-203ENST00000540562 FLNAP21333 2647 aaKnown RBP10.56□□□□□ -0.72
INO80E-203ENST00000540562 SDHAF1A6NFY7 115 aa10.56□□□□□ -0.72
INO80E-203ENST00000540562 IGLL5B9A064 214 aa10.56□□□□□ -0.72
INO80E-203ENST00000540562 SIVA1O15304 175 aa10.56□□□□□ -0.72
INO80E-203ENST00000540562 PROK1P58294 105 aa10.56□□□□□ -0.72
INO80E-203ENST00000540562 SRSF2Q01130 221 aaKnown RBP10.56□□□□□ -0.72
INO80E-203ENST00000540562 ZNF418Q8TF45 676 aaPredicted RBP10.56□□□□□ -0.72
INO80E-203ENST00000540562 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
INO80E-203ENST00000540562 RNF223E7ERA6 249 aa10.56□□□□□ -0.72
INO80E-203ENST00000540562 ORMDL2Q53FV1 153 aa10.56□□□□□ -0.72
INO80E-203ENST00000540562 CEMP1Q6PRD7 247 aaPredicted RBP10.56□□□□□ -0.72
INO80E-203ENST00000540562 PGPEP1Q9NXJ5 209 aa10.56□□□□□ -0.72
INO80E-203ENST00000540562 SMPXQ9UHP9 88 aa10.56□□□□□ -0.72
INO80E-203ENST00000540562 MYMXA0A1B0GTQ4 84 aa10.55□□□□□ -0.72
INO80E-203ENST00000540562 A6NDX4 124 aa10.55□□□□□ -0.72
INO80E-203ENST00000540562 PLNP26678 52 aa10.55□□□□□ -0.72
INO80E-203ENST00000540562 MRPL16Q9NX20 251 aaKnown RBP10.55□□□□□ -0.72
INO80E-203ENST00000540562 Q9UF83 564 aa10.55□□□□□ -0.72
INO80E-203ENST00000540562 ZNF580Q9UK33 172 aa10.55□□□□□ -0.72
INO80E-203ENST00000540562 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
INO80E-203ENST00000540562 C19orf54Q5BKX5 351 aa10.55□□□□□ -0.72
INO80E-203ENST00000540562 Q8N1Y9 231 aa10.55□□□□□ -0.72
INO80E-203ENST00000540562 NEXN-AS1Q8NBZ9 246 aa10.55□□□□□ -0.72
INO80E-203ENST00000540562 TOMM6Q96B49 74 aa10.54□□□□□ -0.72
INO80E-203ENST00000540562 LINC01549A6NIU2 74 aa10.54□□□□□ -0.72
INO80E-203ENST00000540562 PHLDA1Q8WV24 401 aaPredicted RBP10.54□□□□□ -0.72
INO80E-203ENST00000540562 TSHBP01222 138 aa10.54□□□□□ -0.72
INO80E-203ENST00000540562 SMAGPQ0VAQ4 97 aa10.53□□□□□ -0.72
INO80E-203ENST00000540562 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
INO80E-203ENST00000540562 NPC2P61916 151 aa10.53□□□□□ -0.72
INO80E-203ENST00000540562 ZFP2Q6ZN57 461 aa10.53□□□□□ -0.72
INO80E-203ENST00000540562 PTH2Q96A98 100 aa10.53□□□□□ -0.72
INO80E-203ENST00000540562 CRYGDP07320 174 aa10.52□□□□□ -0.72
INO80E-203ENST00000540562 USMG5Q96IX5 58 aa10.52□□□□□ -0.72
INO80E-203ENST00000540562 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.73
INO80E-203ENST00000540562 TSPEAR-AS2P59090 65 aa10.52□□□□□ -0.73
INO80E-203ENST00000540562 ZNF876PQ49A33 203 aa10.52□□□□□ -0.73
INO80E-203ENST00000540562 DCANP1Q8TF63 244 aa10.52□□□□□ -0.73
INO80E-203ENST00000540562 KIR2DL4Q99706 377 aa10.52□□□□□ -0.73
INO80E-203ENST00000540562 IGHV4OR15-8A0A075B7B6 117 aa10.52□□□□□ -0.73
INO80E-203ENST00000540562 A0A087WW49 117 aa10.52□□□□□ -0.73
INO80E-203ENST00000540562 NBEAL2Q6ZNJ1 2754 aa10.51□□□□□ -0.73
INO80E-203ENST00000540562 HIVEP2P31629 2446 aa10.51□□□□□ -0.73
INO80E-203ENST00000540562 PSMB2P49721 201 aa10.51□□□□□ -0.73
INO80E-203ENST00000540562 ITPR3Q14573 2671 aa10.51□□□□□ -0.73
INO80E-203ENST00000540562 IGHV4-4A0A075B6R2 117 aa10.51□□□□□ -0.73
INO80E-203ENST00000540562 LINC01546A6NGU7 62 aa10.51□□□□□ -0.73
INO80E-203ENST00000540562 G3V4G9 280 aa10.51□□□□□ -0.73
INO80E-203ENST00000540562 SLURP1P55000 103 aa10.51□□□□□ -0.73
INO80E-203ENST00000540562 IGHV3-16A0A0C4DH30 117 aa10.5□□□□□ -0.73
INO80E-203ENST00000540562 IGHV3-38A0A0C4DH36 116 aa10.5□□□□□ -0.73
INO80E-203ENST00000540562 RAX2Q96IS3 184 aa10.5□□□□□ -0.73
INO80E-203ENST00000540562 TM2D2Q9BX73 214 aa10.5□□□□□ -0.73
INO80E-203ENST00000540562 TSSC4Q9Y5U2 329 aaPredicted RBP10.5□□□□□ -0.73
INO80E-203ENST00000540562 A0A1B0GWB2 263 aa10.5□□□□□ -0.73
INO80E-203ENST00000540562 ID1P41134 155 aa10.5□□□□□ -0.73
INO80E-203ENST00000540562 LINC00315P59091 139 aa10.5□□□□□ -0.73
INO80E-203ENST00000540562 OR5A1Q8NGJ0 315 aa10.5□□□□□ -0.73
INO80E-203ENST00000540562 HIGD1BQ9P298 99 aa10.5□□□□□ -0.73
INO80E-203ENST00000540562 ZNRF2Q8NHG8 242 aa10.49□□□□□ -0.73
INO80E-203ENST00000540562 PRORYQ9H606 182 aa10.49□□□□□ -0.73
INO80E-203ENST00000540562 HOXA3O43365 443 aaPredicted RBP10.49□□□□□ -0.73
INO80E-203ENST00000540562 TRBV7-3A0A075B6L6 115 aa10.49□□□□□ -0.73
INO80E-203ENST00000540562 A0A1W2PRX2 142 aa10.49□□□□□ -0.73
INO80E-203ENST00000540562 A8MZ25 164 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms