RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 IGHV3-53P01767 116 aa6.06□□□□□ -1.44
TRAPPC1-202ENST00000540486 ORM1P02763 201 aa6.06□□□□□ -1.44
TRAPPC1-202ENST00000540486 SFTA3P0C7M3 94 aa6.06□□□□□ -1.44
TRAPPC1-202ENST00000540486 DNLZQ5SXM8 178 aa6.06□□□□□ -1.44
TRAPPC1-202ENST00000540486 ZNF479Q96JC4 524 aa6.06□□□□□ -1.44
TRAPPC1-202ENST00000540486 MED9Q9NWA0 146 aa6.06□□□□□ -1.44
TRAPPC1-202ENST00000540486 LINC00588Q9Y4M8 146 aa6.06□□□□□ -1.44
TRAPPC1-202ENST00000540486 TRBV20OR9-2A0A075B6H5 130 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 GRIFINA4D1Z8 144 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 RBFOX3A6NFN3 312 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 B4DEV8 164 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 C9JCJ5 164 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 M0R036 132 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 PDE6DO43924 150 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 IFNA1P01562 189 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 FAM162BQ5T6X4 162 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 TEX261Q6UWH6 196 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 PCNPQ8WW12 178 aaKnown RBP6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 PTH2Q96A98 100 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 KRTAP1-5Q9BYS1 174 aa6.05□□□□□ -1.44
TRAPPC1-202ENST00000540486 LRP1Q07954 4544 aaKnown RBP6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 TMSB15BA0A087X1C1 80 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 H3BNG1 76 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 NUDT3O95989 172 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 ARMS2P0C7Q2 107 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 CRYBA4P53673 196 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 ERVFC1-1P60608 527 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 RPL19P84098 196 aaKnown RBP6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 C21orf62-AS1Q17RA5 79 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 ZNF876PQ49A33 203 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 CENPWQ5EE01 88 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 ZNF506Q5JVG8 444 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 IL36BQ9NZH7 164 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 HHLA3Q9XRX5 114 aa6.04□□□□□ -1.44
TRAPPC1-202ENST00000540486 A0A096LPF7 62 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 TRAV4A0A0B4J268 109 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 C19orf71A6NCJ1 209 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 RS1O15537 224 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 GCSHP23434 173 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 S100A4P26447 101 aaKnown RBP6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 FUSP35637 526 aaKnown RBP eCLIP6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 TAGLN2P37802 199 aaKnown RBP6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 ESRGQ1W209 222 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 CFAP126Q5VTH2 177 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 OR4C5Q8NGB2 326 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 TMEM70Q9BUB7 260 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 JPT2Q9H910 190 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 PRO0255Q9UI72 69 aa6.03□□□□□ -1.44
TRAPPC1-202ENST00000540486 H3BVH4 76 aa6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 ASIPP42127 132 aa6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 GNG4P50150 75 aa6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 SLAQ13239 276 aa6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 PRR27Q6MZM9 219 aa6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 Q6ZRN7 208 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 NUDT10Q8NFP7 164 aa6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 OCC1Q8TAD7 63 aa6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 NUDT11Q96G61 164 aa6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 FAM210AQ96ND0 272 aa6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 SAMD10Q9BYL1 202 aa6.02□□□□□ -1.45
TRAPPC1-202ENST00000540486 IGHV3-73A0A0B4J1V6 119 aa6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 TRGV4A0A0C4DH28 118 aa6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 TMEM250H0YL14 139 aa6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 K7EN84 100 aa6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 SRP19P09132 144 aaKnown RBP6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 MGST1P10620 155 aaKnown RBP6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 GATA1P15976 413 aaPredicted RBP6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 TOR2AQ5JU69 321 aa6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 PIK3CD-AS1Q5SR53 167 aa6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 UFSP1Q6NVU6 142 aa6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 SMIM12Q96EX1 92 aa6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 EIF5A2Q9GZV4 153 aaKnown RBP6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 PARLQ9H300 379 aa6.01□□□□□ -1.45
TRAPPC1-202ENST00000540486 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
TRAPPC1-202ENST00000540486 LOC100131303A0A0U1RQF7 123 aa6□□□□□ -1.45
TRAPPC1-202ENST00000540486 C9JQL5 133 aa6□□□□□ -1.45
TRAPPC1-202ENST00000540486 SNAI2O43623 268 aa6□□□□□ -1.45
TRAPPC1-202ENST00000540486 NDUFS6O75380 124 aaKnown RBP6□□□□□ -1.45
TRAPPC1-202ENST00000540486 CRYGDP07320 174 aa6□□□□□ -1.45
TRAPPC1-202ENST00000540486 CXCL1P09341 107 aa6□□□□□ -1.45
TRAPPC1-202ENST00000540486 LINC00315P59091 139 aa6□□□□□ -1.45
TRAPPC1-202ENST00000540486 UPK3BQ9BT76 320 aa6□□□□□ -1.45
TRAPPC1-202ENST00000540486 Q9UF83 564 aa6□□□□□ -1.45
TRAPPC1-202ENST00000540486 LRP2P98164 4655 aa6□□□□□ -1.45
TRAPPC1-202ENST00000540486 MUC21A0A0G2JKD1 596 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 MUC21A0A140T8X8 626 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 A8MWV9 139 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 K7EQD1 137 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 M0R381 172 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 CIDEAO60543 219 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 GZMBP10144 247 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 GYPEP15421 78 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 HAMPP81172 84 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 MRPL23Q16540 153 aaKnown RBP5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 LYPD5Q6UWN5 251 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 SLC25A29Q8N8R3 303 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 DAZAP1Q96EP5 407 aaKnown RBP5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 SFRP2Q96HF1 295 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 PHLDA3Q9Y5J5 127 aa5.99□□□□□ -1.45
TRAPPC1-202ENST00000540486 ICOSQ9Y6W8 199 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms