RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 ZFAND3Q9H8U3 227 aa9.88□□□□□ -0.83
MSH6-210ENST00000540021 C20orf173Q96LM9 149 aa9.88□□□□□ -0.83
MSH6-210ENST00000540021 SS18L2Q9UHA2 77 aa9.88□□□□□ -0.83
MSH6-210ENST00000540021 IGHV7-4-1A0A0J9YVY3 117 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 ANKRD29Q8N6D5 301 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 TRAV12-1A0A0B4J245 112 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 CENPVL3A0A0U1RRI6 287 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 B5MCH6 92 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 TCL1BO95988 128 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 IGHG4P01861 327 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 LY6DQ14210 128 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 SUMO4Q6EEV6 95 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 C9orf47Q6ZRZ4 202 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 ATP5J2P56134 94 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 MEIG1Q5JSS6 88 aa9.87□□□□□ -0.83
MSH6-210ENST00000540021 ZNF48Q96MX3 618 aaPredicted RBP9.87□□□□□ -0.83
MSH6-210ENST00000540021 SCGB1A1P11684 91 aa9.86□□□□□ -0.83
MSH6-210ENST00000540021 LY6G5BQ8NDX9 201 aa9.86□□□□□ -0.83
MSH6-210ENST00000540021 SONP18583 2426 aaKnown RBP9.86□□□□□ -0.83
MSH6-210ENST00000540021 KLRB1Q12918 225 aa9.86□□□□□ -0.83
MSH6-210ENST00000540021 TEN1Q86WV5 123 aa9.86□□□□□ -0.83
MSH6-210ENST00000540021 NEXN-AS1Q8NBZ9 246 aa9.86□□□□□ -0.83
MSH6-210ENST00000540021 PHLDA1Q8WV24 401 aaPredicted RBP9.86□□□□□ -0.83
MSH6-210ENST00000540021 DUX3Q96PT4 197 aa9.86□□□□□ -0.83
MSH6-210ENST00000540021 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
MSH6-210ENST00000540021 TMEM95Q3KNT9 176 aa9.86□□□□□ -0.83
MSH6-210ENST00000540021 DAZ1Q9NQZ3 744 aaKnown RBP9.86□□□□□ -0.83
MSH6-210ENST00000540021 TRAV8-3A0A0A6YYJ7 113 aa9.85□□□□□ -0.83
MSH6-210ENST00000540021 TIMM21Q9BVV7 248 aa9.85□□□□□ -0.83
MSH6-210ENST00000540021 ODF3BA8MYP8 253 aa9.85□□□□□ -0.83
MSH6-210ENST00000540021 CCDC168Q8NDH2 2452 aa9.85□□□□□ -0.83
MSH6-210ENST00000540021 TRBV7-3A0A075B6L6 115 aa9.85□□□□□ -0.83
MSH6-210ENST00000540021 BLCAPP62952 87 aa9.85□□□□□ -0.83
MSH6-210ENST00000540021 NDUFA11Q86Y39 141 aa9.85□□□□□ -0.83
MSH6-210ENST00000540021 C10orf126Q8N4M7 172 aa9.85□□□□□ -0.83
MSH6-210ENST00000540021 FAM223BA6NKX1 122 aa9.84□□□□□ -0.83
MSH6-210ENST00000540021 M0R2P5 195 aa9.84□□□□□ -0.83
MSH6-210ENST00000540021 FAM223AQ8IWN6 122 aa9.84□□□□□ -0.83
MSH6-210ENST00000540021 ZMAT4Q9H898 229 aa9.84□□□□□ -0.83
MSH6-210ENST00000540021 ATXN8Q156A1 80 aa9.84□□□□□ -0.83
MSH6-210ENST00000540021 IGHV3-38A0A0C4DH36 116 aa9.84□□□□□ -0.83
MSH6-210ENST00000540021 CFC1BP0CG36 223 aa9.84□□□□□ -0.83
MSH6-210ENST00000540021 CFC1P0CG37 223 aa9.84□□□□□ -0.83
MSH6-210ENST00000540021 Q6ZS46 218 aa9.84□□□□□ -0.83
MSH6-210ENST00000540021 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
MSH6-210ENST00000540021 Q6ZUT4 128 aa9.83□□□□□ -0.84
MSH6-210ENST00000540021 CNFNQ9BYD5 112 aa9.83□□□□□ -0.84
MSH6-210ENST00000540021 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.83□□□□□ -0.84
MSH6-210ENST00000540021 SRSF2Q01130 221 aaKnown RBP9.83□□□□□ -0.84
MSH6-210ENST00000540021 RNF183Q96D59 192 aa9.83□□□□□ -0.84
MSH6-210ENST00000540021 PIMREGQ9BSJ6 248 aa9.83□□□□□ -0.84
MSH6-210ENST00000540021 NDUFA4O00483 81 aa9.83□□□□□ -0.84
MSH6-210ENST00000540021 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
MSH6-210ENST00000540021 LRBAP50851 2863 aa9.83□□□□□ -0.84
MSH6-210ENST00000540021 SYNJ2BPP57105 145 aa9.82□□□□□ -0.84
MSH6-210ENST00000540021 IGHV3-16A0A0C4DH30 117 aa9.82□□□□□ -0.84
MSH6-210ENST00000540021 CIRBPQ14011 172 aaKnown RBP9.82□□□□□ -0.84
MSH6-210ENST00000540021 CDSNQ15517 529 aa9.82□□□□□ -0.84
MSH6-210ENST00000540021 AKAP13Q12802 2813 aa9.82□□□□□ -0.84
MSH6-210ENST00000540021 CLPSL1A2RUU4 121 aa9.82□□□□□ -0.84
MSH6-210ENST00000540021 MORN3Q6PF18 240 aaPredicted RBP9.82□□□□□ -0.84
MSH6-210ENST00000540021 MRPL53Q96EL3 112 aaKnown RBP9.82□□□□□ -0.84
MSH6-210ENST00000540021 ZFAND2AQ8N6M9 145 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 IGLV2-18A0A075B6J9 118 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 XGP55808 180 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 C5orf56Q8N8D9 126 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 MDFICQ9P1T7 246 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 A0A0J9YY99 117 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 K7ENP7 123 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
MSH6-210ENST00000540021 DAND5Q8N907 189 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 PIFOQ8TCI5 191 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 DYNLRB2Q8TF09 96 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 ITLN2Q8WWU7 325 aaPredicted RBP9.81□□□□□ -0.84
MSH6-210ENST00000540021 POLQO75417 2590 aa9.81□□□□□ -0.84
MSH6-210ENST00000540021 CFAP126Q5VTH2 177 aa9.8□□□□□ -0.84
MSH6-210ENST00000540021 LINC01587Q99440 93 aa9.8□□□□□ -0.84
MSH6-210ENST00000540021 LENEPQ9Y5L5 61 aa9.8□□□□□ -0.84
MSH6-210ENST00000540021 AJUBAQ96IF1 538 aa9.8□□□□□ -0.84
MSH6-210ENST00000540021 USMG5Q96IX5 58 aa9.8□□□□□ -0.84
MSH6-210ENST00000540021 SPATA25Q9BR10 227 aa9.8□□□□□ -0.84
MSH6-210ENST00000540021 SIRPDQ9H106 197 aa9.8□□□□□ -0.84
MSH6-210ENST00000540021 TOMM7Q9P0U1 55 aa9.8□□□□□ -0.84
MSH6-210ENST00000540021 H3BMM0 161 aa9.79□□□□□ -0.84
MSH6-210ENST00000540021 C3orf56Q8N813 242 aa9.79□□□□□ -0.84
MSH6-210ENST00000540021 UBE2WQ96B02 151 aa9.79□□□□□ -0.84
MSH6-210ENST00000540021 CCL19Q99731 98 aa9.79□□□□□ -0.84
MSH6-210ENST00000540021 NDUFA12Q9UI09 145 aa9.79□□□□□ -0.84
MSH6-210ENST00000540021 IGHV1-69DA0A0B4J2H0 117 aa9.79□□□□□ -0.84
MSH6-210ENST00000540021 IGHV1-69P01742 117 aa9.79□□□□□ -0.84
MSH6-210ENST00000540021 NFE4Q86UQ8 179 aa9.78□□□□□ -0.84
MSH6-210ENST00000540021 C15orf53Q8NAA6 179 aa9.78□□□□□ -0.84
MSH6-210ENST00000540021 I3L3M4 83 aa9.78□□□□□ -0.84
MSH6-210ENST00000540021 IGHV4-38-2P0DP08 117 aa9.78□□□□□ -0.84
MSH6-210ENST00000540021 MAPK1IP1LQ8NDC0 245 aa9.78□□□□□ -0.84
MSH6-210ENST00000540021 DMXL1Q9Y485 3027 aa9.78□□□□□ -0.84
MSH6-210ENST00000540021 IGHV1OR15-1A0A075B7D0 117 aa9.78□□□□□ -0.84
MSH6-210ENST00000540021 ADORA2A-AS1P86434 159 aa9.78□□□□□ -0.84
MSH6-210ENST00000540021 Q8N1Y9 231 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms