RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 VMO1Q7Z5L0 202 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 RNASE6Q93091 150 aaKnown RBP4.57□□□□□ -1.68
SNHG1-211ENST00000539921 BEX4Q9NWD9 120 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-211ENST00000539921 RNF7Q9UBF6 113 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 A0A0C4DFX4 3053 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 MYO7AQ13402 2215 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 IGHV3-20A0A0C4DH32 117 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 ZNF503-AS2A6NEH8 195 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 NDUFB3O43676 98 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 TRGV3P03979 118 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 GRPP07492 148 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 CCL3P10147 92 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 HILS1P60008 231 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 BLCAPP62952 87 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 MRPL55Q7Z7F7 128 aaKnown RBP4.56□□□□□ -1.68
SNHG1-211ENST00000539921 C20orf197Q8N268 126 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 WFDC11Q8NEX6 87 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 CTSZQ9UBR2 303 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 KNTC1P50748 2209 aa4.56□□□□□ -1.68
SNHG1-211ENST00000539921 MKI67P46013 3256 aaKnown RBP4.55□□□□□ -1.68
SNHG1-211ENST00000539921 IGKV3D-20A0A0C4DH25 116 aa4.55□□□□□ -1.68
SNHG1-211ENST00000539921 LMO7DNF2Z398 122 aa4.55□□□□□ -1.68
SNHG1-211ENST00000539921 H3BTX0 84 aa4.55□□□□□ -1.68
SNHG1-211ENST00000539921 IGHV4-34P06331 123 aa4.55□□□□□ -1.68
SNHG1-211ENST00000539921 RNASE4P34096 147 aaKnown RBP4.55□□□□□ -1.68
SNHG1-211ENST00000539921 MRPS21P82921 87 aaKnown RBP4.55□□□□□ -1.68
SNHG1-211ENST00000539921 CIRBPQ14011 172 aaKnown RBP4.55□□□□□ -1.68
SNHG1-211ENST00000539921 FAM223AQ8IWN6 122 aa4.55□□□□□ -1.68
SNHG1-211ENST00000539921 LINC00482Q8N8I6 264 aa4.55□□□□□ -1.68
SNHG1-211ENST00000539921 DYNLRB2Q8TF09 96 aa4.55□□□□□ -1.68
SNHG1-211ENST00000539921 C22orf24Q9Y442 160 aa4.55□□□□□ -1.68
SNHG1-211ENST00000539921 U3KQE9 123 aa4.55□□□□□ -1.68
SNHG1-211ENST00000539921 DIDO1Q9BTC0 2240 aaKnown RBP4.55□□□□□ -1.68
SNHG1-211ENST00000539921 CABIN1Q9Y6J0 2220 aa4.55□□□□□ -1.68
SNHG1-211ENST00000539921 PCNX2A6NKB5 2137 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 PDE4DIPQ5VU43 2346 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 IGKV2-40A0A087WW87 121 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-211ENST00000539921 IGHV5-10-1A0A0J9YXX1 117 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 JMJD7-PLA2G4BH0Y9G9 81 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 H0YGX0 51 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 SOCS3O14543 225 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 NDUFA1O15239 70 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 SPRY2O43597 315 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 LHBP01229 141 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 IGKV2D-40P01614 121 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-211ENST00000539921 IGHV3-30-3P0DP02 117 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 CCL5P13501 91 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 RPL28P46779 137 aaKnown RBP4.54□□□□□ -1.68
SNHG1-211ENST00000539921 MSMPQ1L6U9 139 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 MRGPRG-AS1Q2M3A8 158 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 C9orf47Q6ZRZ4 202 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 STHQ8IWL8 128 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 C17orf77Q96MU5 243 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 NDUFA12Q9UI09 145 aa4.54□□□□□ -1.68
SNHG1-211ENST00000539921 E7EUB6 86 aa4.53□□□□□ -1.68
SNHG1-211ENST00000539921 C5orf67F2Z3F1 127 aa4.53□□□□□ -1.68
SNHG1-211ENST00000539921 M0R1W7 72 aa4.53□□□□□ -1.68
SNHG1-211ENST00000539921 RBM3P98179 157 aaKnown RBP4.53□□□□□ -1.68
SNHG1-211ENST00000539921 ESRGQ1W209 222 aa4.53□□□□□ -1.68
SNHG1-211ENST00000539921 CD164L2Q6UWJ8 174 aa4.53□□□□□ -1.68
SNHG1-211ENST00000539921 IGFL2Q6UWQ7 119 aa4.53□□□□□ -1.68
SNHG1-211ENST00000539921 GPHB5Q86YW7 130 aa4.53□□□□□ -1.68
SNHG1-211ENST00000539921 IL17DQ8TAD2 202 aa4.53□□□□□ -1.68
SNHG1-211ENST00000539921 Q96MF0 132 aa4.53□□□□□ -1.68
SNHG1-211ENST00000539921 LINC00846Q9NV44 126 aa4.53□□□□□ -1.68
SNHG1-211ENST00000539921 KIAA0100Q14667 2235 aaKnown RBP4.53□□□□□ -1.68
SNHG1-211ENST00000539921 FER1L5A0AVI2 2057 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 TNCP24821 2201 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 TEX22C9J3V5 150 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 K7EIM0 57 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 SNRPD3P62318 126 aaKnown RBP4.52□□□□□ -1.69
SNHG1-211ENST00000539921 CFHR1Q03591 330 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 Q1T7F1 81 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 HIST2H2BCQ6DN03 193 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 HIST2H2BDQ6DRA6 164 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 Q8N2B8 174 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 FAM110DQ8TAY7 271 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-211ENST00000539921 KLK15Q9H2R5 256 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 RETNQ9HD89 108 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 MED12Q93074 2177 aa4.52□□□□□ -1.69
SNHG1-211ENST00000539921 IGLV5-45A0A087WSX0 123 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 PAX4O43316 350 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 IGKV3-15P01624 115 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 IGLV1-40P01703 118 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 SAA4P35542 130 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 KLK9Q2XQG4 91 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 C3orf36Q3SXR2 165 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 C10orf55Q5SWW7 151 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 UBL5Q9BZL1 73 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 KLK9Q9UKQ9 250 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 MOB4Q9Y3A3 225 aa4.51□□□□□ -1.69
SNHG1-211ENST00000539921 SEC16AO15027 2179 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 TRAV21A0A0B4J279 112 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 IGKV3D-7A0A0C4DH55 119 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 NDUFS5O43920 106 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 TRBV12-3P01733 135 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 CD28P10747 220 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 MIFP14174 115 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 CXCL6P80162 114 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 Q0VFX4 171 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms