RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 SCGB1A1P11684 91 aa15.2■□□□□ 0.02
TMEM260-203ENST00000539559 SUMO4Q6EEV6 95 aa15.2■□□□□ 0.02
TMEM260-203ENST00000539559 KIF25-AS1Q9Y6Z4 181 aa15.2■□□□□ 0.02
TMEM260-203ENST00000539559 SORL1Q92673 2214 aa15.2■□□□□ 0.02
TMEM260-203ENST00000539559 TMEM238LA0A1B0GVL6 79 aa15.2■□□□□ 0.02
TMEM260-203ENST00000539559 A6NJY4 79 aa15.2■□□□□ 0.02
TMEM260-203ENST00000539559 IGIPA6NJ69 53 aa15.2■□□□□ 0.02
TMEM260-203ENST00000539559 C19orf54Q5BKX5 351 aa15.2■□□□□ 0.02
TMEM260-203ENST00000539559 ZNRF2Q8NHG8 242 aa15.2■□□□□ 0.02
TMEM260-203ENST00000539559 RHPN1-AS1Q9BWJ2 59 aa15.2■□□□□ 0.02
TMEM260-203ENST00000539559 ZNF256Q9Y2P7 627 aaPredicted RBP15.2■□□□□ 0.02
TMEM260-203ENST00000539559 FAM223BA6NKX1 122 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 IGKV3-20P01619 116 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 IGHV4-39P01824 125 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 PF4V1P10720 104 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 NDUFA11Q86Y39 141 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 FAM223AQ8IWN6 122 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 FAM19A4Q96LR4 140 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 CDIP1Q9H305 208 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 IGHV3-64A0A075B6Q5 118 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 TRAV12-3A0A0B4J271 114 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 TCL1BO95988 128 aa15.19■□□□□ 0.02
TMEM260-203ENST00000539559 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.18■□□□□ 0.023e-6■■■■□ 24
TMEM260-203ENST00000539559 NDUFA4O00483 81 aa15.18■□□□□ 0.02
TMEM260-203ENST00000539559 MT-ATP8P03928 68 aa15.17■□□□□ 0.02
TMEM260-203ENST00000539559 CFC1BP0CG36 223 aa15.17■□□□□ 0.02
TMEM260-203ENST00000539559 CFC1P0CG37 223 aa15.17■□□□□ 0.02
TMEM260-203ENST00000539559 CKS1BP61024 79 aa15.17■□□□□ 0.02
TMEM260-203ENST00000539559 BLCAPP62952 87 aa15.17■□□□□ 0.02
TMEM260-203ENST00000539559 PMVKQ15126 192 aa15.17■□□□□ 0.02
TMEM260-203ENST00000539559 CARD19Q96LW7 228 aa15.17■□□□□ 0.02
TMEM260-203ENST00000539559 CCL19Q99731 98 aa15.17■□□□□ 0.02
TMEM260-203ENST00000539559 SDHAF1A6NFY7 115 aa15.16■□□□□ 0.02
TMEM260-203ENST00000539559 Q5PR19 223 aa15.16■□□□□ 0.02
TMEM260-203ENST00000539559 USP24Q9UPU5 2620 aa15.16■□□□□ 0.02
TMEM260-203ENST00000539559 SPG11Q96JI7 2443 aa15.16■□□□□ 0.02
TMEM260-203ENST00000539559 A0A1B0GV72 72 aa15.16■□□□□ 0.02
TMEM260-203ENST00000539559 POLR2KP53803 58 aaKnown RBP15.16■□□□□ 0.02
TMEM260-203ENST00000539559 UBE2D3P61077 147 aa15.16■□□□□ 0.02
TMEM260-203ENST00000539559 UBE2D2P62837 147 aa15.16■□□□□ 0.02
TMEM260-203ENST00000539559 FAM159AQ6UWV7 190 aa15.16■□□□□ 0.02
TMEM260-203ENST00000539559 CELSR2Q9HCU4 2923 aa15.16■□□□□ 0.02
TMEM260-203ENST00000539559 TRAV12-2A0A075B6T6 113 aa15.15■□□□□ 0.02
TMEM260-203ENST00000539559 DOPEY1Q5JWR5 2465 aa15.15■□□□□ 0.02
TMEM260-203ENST00000539559 H7C2G1 150 aa15.15■□□□□ 0.02
TMEM260-203ENST00000539559 IGHV3-30P01768 117 aa15.15■□□□□ 0.02
TMEM260-203ENST00000539559 PRB1P04280 392 aa15.15■□□□□ 0.02
TMEM260-203ENST00000539559 IGHV3-30-5P0DP03 117 aa15.15■□□□□ 0.02
TMEM260-203ENST00000539559 HERVK_113P61574 105 aa15.15■□□□□ 0.02
TMEM260-203ENST00000539559 RAX2Q96IS3 184 aa15.15■□□□□ 0.02
TMEM260-203ENST00000539559 KIR2DL4Q99706 377 aa15.14■□□□□ 0.01
TMEM260-203ENST00000539559 IGHV4-38-2P0DP08 117 aa15.14■□□□□ 0.01
TMEM260-203ENST00000539559 CLUHP3Q96NS8 147 aa15.14■□□□□ 0.01
TMEM260-203ENST00000539559 XGP55808 180 aa15.13■□□□□ 0.01
TMEM260-203ENST00000539559 SPINK8P0C7L1 97 aa15.13■□□□□ 0.01
TMEM260-203ENST00000539559 SCGB1C2P0DMR2 95 aa15.13■□□□□ 0.01
TMEM260-203ENST00000539559 MDFICQ9P1T7 246 aa15.13■□□□□ 0.01
TMEM260-203ENST00000539559 MED14OSP0DP75 135 aa15.12■□□□□ 0.01
TMEM260-203ENST00000539559 PIMREGQ9BSJ6 248 aa15.12■□□□□ 0.01
TMEM260-203ENST00000539559 ZNF580Q9UK33 172 aa15.12■□□□□ 0.01
TMEM260-203ENST00000539559 PPP1R17O96001 155 aa15.12■□□□□ 0.01
TMEM260-203ENST00000539559 BBC3Q96PG8 261 aaPredicted RBP15.12■□□□□ 0.01
TMEM260-203ENST00000539559 H3BUX3 64 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 VCYO14598 125 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 TMEM95Q3KNT9 176 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 APRG1Q8IVJ8 170 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 AMELXQ99217 191 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 FLNCQ14315 2725 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 CSPG4Q6UVK1 2322 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 IGHV4OR15-8A0A075B7B6 117 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 A0A087WW49 117 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 J3QQQ9 107 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 NXPH4O95158 308 aa15.11■□□□□ 0.01
TMEM260-203ENST00000539559 IGHV1-69DA0A0B4J2H0 117 aa15.1■□□□□ 0.01
TMEM260-203ENST00000539559 EIF4EBP3O60516 100 aaPredicted RBP15.1■□□□□ 0.01
TMEM260-203ENST00000539559 IGHV1-69P01742 117 aa15.1■□□□□ 0.01
TMEM260-203ENST00000539559 ZNF56Q15929 161 aa15.1■□□□□ 0.01
TMEM260-203ENST00000539559 POM121L12Q8N7R1 296 aa15.1■□□□□ 0.01
TMEM260-203ENST00000539559 SLC25A29Q8N8R3 303 aa15.1■□□□□ 0.01
TMEM260-203ENST00000539559 DOPEY2Q9Y3R5 2298 aa15.1■□□□□ 0.01
TMEM260-203ENST00000539559 KLLNB2CW77 178 aa15.1■□□□□ 0.01
TMEM260-203ENST00000539559 CRIP2P52943 208 aaPredicted RBP15.1■□□□□ 0.01
TMEM260-203ENST00000539559 USP9XQ93008 2570 aaPredicted RBP15.1■□□□□ 0.01
TMEM260-203ENST00000539559 ZNF688P0C7X2 276 aa15.1■□□□□ 0.01
TMEM260-203ENST00000539559 ATP5J2P56134 94 aa15.09■□□□□ 0.01
TMEM260-203ENST00000539559 ZNF876PQ49A33 203 aa15.09■□□□□ 0.01
TMEM260-203ENST00000539559 C10orf126Q8N4M7 172 aa15.09■□□□□ 0.01
TMEM260-203ENST00000539559 LGALS3P17931 250 aaKnown RBP15.09■□□□□ 0.01
TMEM260-203ENST00000539559 TRPT1Q86TN4 253 aaKnown RBP15.09■□□□□ 0.01
TMEM260-203ENST00000539559 ANKRD29Q8N6D5 301 aa15.09■□□□□ 0.01
TMEM260-203ENST00000539559 ATP6V0E2Q8NHE4 81 aa15.09■□□□□ 0.01
TMEM260-203ENST00000539559 C10orf105Q8TEF2 133 aa15.09■□□□□ 0.01
TMEM260-203ENST00000539559 TRAV2A0A0B4J234 112 aa15.08■□□□□ 0
TMEM260-203ENST00000539559 A4D1N5 150 aa15.08■□□□□ 0
TMEM260-203ENST00000539559 Q6ZUT4 128 aa15.08■□□□□ 0
TMEM260-203ENST00000539559 TEN1Q86WV5 123 aa15.08■□□□□ 0
TMEM260-203ENST00000539559 ZFYVE26Q68DK2 2539 aa15.08■□□□□ 0
TMEM260-203ENST00000539559 DAZ1Q9NQZ3 744 aaKnown RBP15.08■□□□□ 0
TMEM260-203ENST00000539559 MYO18BQ8IUG5 2567 aa15.08■□□□□ 0
TMEM260-203ENST00000539559 TRAV26-1A0A087WT03 109 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms