RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 CLUHP3Q96NS8 147 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 KMT2AQ03164 3969 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 TRBV20OR9-2A0A075B6H5 130 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 F8W1H4 67 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 SYS1-DBNDD2H3BUS1 97 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 K7EN84 100 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 FABP2P12104 132 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 AZU1P20160 251 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 NTF3P20783 257 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 GCHFRP30047 84 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 ATP5G3P48201 142 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 CKS1BP61024 79 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 PRR20EP86478 221 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 PRR20CP86479 221 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 PRR20DP86480 221 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 PRR20BP86481 221 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 PRR20AP86496 221 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 EBLN2Q6P2I7 272 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 TEPPQ6URK8 271 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 OR10AG1Q8NH19 301 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 PHLDA1Q8WV24 401 aaPredicted RBP5.19□□□□□ -1.58
LMO3-220ENST00000539232 C16orf92Q96LL3 132 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 MAP1LC3CQ9BXW4 147 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 NPVFQ9HCQ7 196 aa5.19□□□□□ -1.58
LMO3-220ENST00000539232 IGHV3OR16-12A0A075B7B8 117 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 SERTM2A0A1B0GWG4 89 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 SCO2A0A1W2PP80 73 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 A0A1W2PPM0 123 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 A0A1W2PRE2 83 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 FAM231BA6NCW3 169 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 A8MTW9 85 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 F2Z2F3 143 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 HIST1H1EP10412 219 aaKnown RBP5.18□□□□□ -1.58
LMO3-220ENST00000539232 S100A7P31151 101 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 EMP1P54849 157 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 C12orf74Q32Q52 190 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 MORN3Q6PF18 240 aaPredicted RBP5.18□□□□□ -1.58
LMO3-220ENST00000539232 PQLC2Q6ZP29 291 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 Q6ZVH6 145 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 LINC00305Q7Z4B0 112 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 C11orf45Q8TAV5 145 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 DERL1Q9BUN8 251 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 C11orf68Q9H3H3 251 aaKnown RBP5.18□□□□□ -1.58
LMO3-220ENST00000539232 VPS13DQ5THJ4 4388 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 PKHD1P08F94 4074 aa5.18□□□□□ -1.58
LMO3-220ENST00000539232 TRAV12-2A0A075B6T6 113 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 A0A087X0K7 114 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 GAGE12HA6NDE8 117 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 COX7A2P2O60397 106 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 LEPROTL1O95214 131 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 TSPAN13O95857 204 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 ARL14EPLP0DKL9 152 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 CT45A10P0DMU9 189 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 ID1P41134 155 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 TAS2R45P59539 299 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 SPINK13Q1W4C9 94 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 CT83Q5H943 113 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 IBA57Q5T440 356 aaKnown RBP5.17□□□□□ -1.58
LMO3-220ENST00000539232 LINC01545Q5VT33 79 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 Q6ZTC4 211 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 BLNKQ8WV28 456 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 FAM167A-AS1Q96KT0 104 aa5.17□□□□□ -1.58
LMO3-220ENST00000539232 MRPL16Q9NX20 251 aaKnown RBP5.17□□□□□ -1.58
LMO3-220ENST00000539232 YTHDF2Q9Y5A9 579 aaKnown RBP5.17□□□□□ -1.58
LMO3-220ENST00000539232 AGRNO00468 2067 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 PYYP10082 97 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 RPL7P18124 248 aaKnown RBP5.16□□□□□ -1.58
LMO3-220ENST00000539232 TCL1AP56279 114 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 LINC01559Q495D7 138 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 CENPWQ5EE01 88 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 C10orf113Q5VZT2 155 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 Q6ZQT7 251 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 MIR17HGQ75NE6 70 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 FAM19A2Q8N3H0 131 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 OR8A1Q8NGG7 326 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 ATP6V0E2Q8NHE4 81 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 ZNF503Q96F45 646 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 NDFIP1Q9BT67 221 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 GFRA4Q9GZZ7 299 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 SPCS1Q9Y6A9 102 aa5.16□□□□□ -1.58
LMO3-220ENST00000539232 A0A1B0GW15 77 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 A0A1B0GXF2 115 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 M0R3E3 92 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 MIFP14174 115 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 CRYBA4P53673 196 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 RPL24P83731 157 aaKnown RBP5.15□□□□□ -1.59
LMO3-220ENST00000539232 ERCC8Q13216 396 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 RNASEKQ6P5S7 137 aaKnown RBP5.15□□□□□ -1.59
LMO3-220ENST00000539232 BOD1L2Q8IYS8 172 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 ATOH7Q8N100 152 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 GPR82Q96P67 336 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 SLC25A2Q9BXI2 301 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 MRPL32Q9BYC8 188 aaKnown RBP5.15□□□□□ -1.59
LMO3-220ENST00000539232 HIGD1BQ9P298 99 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 APLNQ9ULZ1 77 aa5.15□□□□□ -1.59
LMO3-220ENST00000539232 TRAV26-1A0A087WT03 109 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 A0A1B0GVY2 172 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 PLAC8L1A1L4L8 177 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 NUPR2A6NF83 97 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 PGPEP1LA6NFU8 196 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 233.7 ms